prot_Ecto-sp13_S_contig1599.4390.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1599.4390.1
Unique Nameprot_Ecto-sp13_S_contig1599.4390.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length662
Homology
BLAST of mRNA_Ecto-sp13_S_contig1599.4390.1 vs. uniprot
Match: D8LDJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ8_ECTSI)

HSP 1 Score: 1087 bits (2810), Expect = 0.000e+0
Identity = 585/646 (90.56%), Postives = 601/646 (93.03%), Query Frame = 0
Query:   15 GGALGAAGGVVVATPATADGAVNRTVSGSVSDNLSRGLDTDSEGGMELGDEATSSVGNGAEPVEDVNELMSAVSSHVEGGDVKDVKGECFVRVRNATTGRDLQTETVSGGANIGFHETFVVPCQGPRDAVVLEVFFREGEKAVAIGDAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPWTGSDKSVHVLGCGEVFVACERQWHVGGEPVDGDCSPVFVKLLTSKDRWNRSGWCFETLCNGGGVSVPVLERASPPLRESGRYFFRVCNPEGARLHRKGDAKSKLRKELLPEGQVLEAGDKWTPAGSPVTFVTVVNRRGFIIQRRGEKTVTNSAGEAAFEEVECPKSTVVSSVGVPEHTAEPPTSSSAVGAADATPADGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVRRLYRVREEAGVEATKTPDIVAPAADCIEAGAAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVSHENGVVVRTAPGLDAPAVKPRRILPVTKLVNVSERLTRAEDIMNLSRPPIFLRQVLAGNDGWVFDRRGHTLVCEDVTVKSRIATANAITSEAARLSLGGVA 660
            GGALGAAGGVVVATP TADG V              GLDT+SEGG+E GDEATSSVG+GAEPVEDVNELMSA+SS++EGG+VK+VKGECFVR+RNATTGRDLQTETVSGGANIGFHETFVVPCQGPRDAVVLEVFF EGEKAVAIGDAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQP TGSD+SVHVLGCGEVFVACERQWHVGGEPVDGDCSPVFVKL+TSKDRWNRSGWCFETLCN GGVSVPVLERASPPLRESGRYFFRVCNPEGARLHRKGD KS+LRKELLPEGQVLEAG+KWTPAGSPVTFVTVVN RGF+IQRRGEKTV N+ GEAAFEEVECPKSTV+SSVGVPEHTAEPPTSSS V AADAT ADGTAA     XXXXXXXXXXXXXXXX     XXXXXXXXXXXXSVRRLYRVREE GVEATKTPDIVAPAAD IE G AFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRV HENGVVVRTAPGLDAP VKPRRILPVTKLVNVSERLTRAEDIMNLSRPPIFLR  LAGNDGWVFDRRGHTLVCEDVTVKSRIATANAITSEAARLSLGGVA
Sbjct:  109 GGALGAAGGVVVATPGTADGTVXXXXXXXXXXXXXXGLDTESEGGIESGDEATSSVGDGAEPVEDVNELMSALSSNMEGGEVKEVKGECFVRIRNATTGRDLQTETVSGGANIGFHETFVVPCQGPRDAVVLEVFFGEGEKAVAIGDAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPCTGSDRSVHVLGCGEVFVACERQWHVGGEPVDGDCSPVFVKLMTSKDRWNRSGWCFETLCNSGGVSVPVLERASPPLRESGRYFFRVCNPEGARLHRKGDTKSRLRKELLPEGQVLEAGNKWTPAGSPVTFVTVVNGRGFVIQRRGEKTVMNATGEAAFEEVECPKSTVLSSVGVPEHTAEPPTSSSTVEAADATSADGTAATASKGXXXXXXXXXXXXXXXXDSKVDXXXXXXXXXXXXSVRRLYRVREEVGVEATKTPDIVAPAADRIEVGVAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVCHENGVVVRTAPGLDAPPVKPRRILPVTKLVNVSERLTRAEDIMNLSRPPIFLR--LAGNDGWVFDRRGHTLVCEDVTVKSRIATANAITSEAARLSLGGVA 752          
BLAST of mRNA_Ecto-sp13_S_contig1599.4390.1 vs. uniprot
Match: A0A6H5LA98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA98_9PHAE)

HSP 1 Score: 887 bits (2291), Expect = 0.000e+0
Identity = 476/591 (80.54%), Postives = 487/591 (82.40%), Query Frame = 0
Query:   21 AGGVVVATPATADGAVNRTVSGSVSDNLSRGLDTDSEGGMELGDEATSSVGNGAEPVEDVNELMSAVSSHVEGGDVKDVKGECFVRVRNATTGRDLQ-----TETVSGGANIGFHETFVVPCQGPRDAVVLEVFFREGEKAVAIG----------------DAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPWTGSDKSVHVLGCGEVFVACERQWHVGGEPVDGDCSPVFVKLLTSKDRWNRSGWCFETLCNGGGVSVPVLERASPPLRESGRYFFRVCNPEGARLHRKGDAKSKLRKELLPEGQVLEAGDKWTPAGSPVTFVTVVNRRGFIIQRRGEK------------TVTNSAGEAAFEEVECPKSTVVSSVGVPEHTAEPPTSSSAVGAADATPADGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVRRLYRVREEAGVEATKTPDIVAPAADCIEAGAAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVSHENGVVVRTAPGLDAPAVK 578
            AG VVVA+P TADG VNR              DTDSEGGME GDEATS++G+GAEPVEDVNELMSAVSS+VEG +VKDVKG CFVRVRNATTGRDLQ     TETVSGGANI FHETFVVPCQGPRDAVVLEVFF EGEKAVAIG                      DARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQP TGSD+SVHVL CGEVFVACERQWHVGGEPVDGDCSPVFVKL+TSKDRWNRSGWCFETLCNGGGVSVPVLERASPPLRESGRYFFRV NPEGARLHRKGD KS LRKELLPEGQVLEAG+KWTPAGSPVTFVTVVN RGFIIQRRGEK            TVTN+AGEAAFEEVECPKST+VSSVGVPEHTAEPPT SS V  ADAT ADG AA                              XXXXXXXXSVRRLYRVREEAGVEATKTPDIVAPAADCIEAG AFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVSHENGVVVRTAPGLDAPAVK
Sbjct:  104 AGEVVVASPGTADGTVNRXXXXXXXXXXXXXXDTDSEGGMESGDEATSTLGDGAEPVEDVNELMSAVSSNVEGAEVKDVKGVCFVRVRNATTGRDLQRHVLKTETVSGGANIEFHETFVVPCQGPRDAVVLEVFFGEGEKAVAIGMRGQSSNDYGMHDXXXXXXXXXDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPCTGSDRSVHVLECGEVFVACERQWHVGGEPVDGDCSPVFVKLMTSKDRWNRSGWCFETLCNGGGVSVPVLERASPPLRESGRYFFRVRNPEGARLHRKGDTKSTLRKELLPEGQVLEAGNKWTPAGSPVTFVTVVNGRGFIIQRRGEKVDVARRMTETAKTVTNAAGEAAFEEVECPKSTIVSSVGVPEHTAEPPTFSSTVEGADATAADGIAATASTGDGRCRRSGSSSPSKTRDSKVDKVKAXXXXXXXXSVRRLYRVREEAGVEATKTPDIVAPAADCIEAGTAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVSHENGVVVRTAPGLDAPAVK 694          
BLAST of mRNA_Ecto-sp13_S_contig1599.4390.1 vs. uniprot
Match: A0A7S2UXS7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.810e-26
Identity = 118/451 (26.16%), Postives = 185/451 (41.02%), Query Frame = 0
Query:  192 LRVETFWLDEAKPRKEVGEFYYKVVHPCGVHLRNQPWTGSDKSVHVLGCGEVFVACERQWHVGGEPVDGDCSPVFVKLLTSKDRWNRSGWCFETLC-----NGGGVSVPVLERASPPLRESGRYFFRVCNPEGARLHRKGDAKSKLRKELLPEGQVLEAGDKWTP-AGSPVTFVTVVNRRGFIIQRRGEKTVTNSAGEAAFEEVECPKSTVVSSVGVPEHTAEPPTSSSAVGAADATPADGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVRRLYRVREEAGVEATKTPDIVAPAA-DCIEAGAAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHEFGAYTYRVSHENGVVVRTAPGLDAPAVKPRRILPVTKLVNVSERLTRAEDIMNLSRPPIFLRQVLAGNDGWVFDRRGHTLVCEDV 635
            LRV   WLD+A+P +  G F+Y+VVHP GV +R  P     K+   L  GEV    ++      + +D D +  ++++   +D W R GW FE +            V  LE   PP  +   +F+RV + +GA+L  K    S+LR E LP G V+EA  +  P   S + ++   +  GFI++  G + +  +   A+ +    P +   S  G    T E           +  PA+                                               ++V  E GV   K   + A +    ++A   F         Y G+G+V+F   +    WVR  +  + ++ +V   V E G + YRV +E GV VRT P   A      ++L      + S +L    D  +   PP+FLR  L+   GWVF+ R    VCE +
Sbjct:    2 LRVAGMWLDQAQPTRVWGSFFYRVVHPKGVAVRETPDVEGRKTGTCLFYGEVVEISQKV-----KLLDDDTT--YLRMDHFRDPWMRKGWVFERVRALNPETSRMEEVQALEPMKPPKVQQDDFFYRVIHQDGAQLAVKARMDSELRHERLPFGTVVEASRRVKPFEASDILYLRPDSHEGFILETPGGEMLLKAPPPASVD----PAAEEASQRGEMLPTLE---------RFEPQPAE--------------------------------------QEDNEGTFFFQVVCEPGVFVRKEAKLCAQSTRTLLKAETTFTSTCLRTLKYPGLGEVSFARCDAARGWVRIQKHKIPIIREVPDAV-ENGPFNYRVVYEGGVSVRTEPRFAASTTG--QVLEEGDEFSASCKLIGGGDDGDAQDPPVFLR--LSNKSGWVFEARNGIQVCEQL 389          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1599.4390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDJ8_ECTSI0.000e+090.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA98_9PHAE0.000e+080.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UXS7_9STRA8.810e-2626.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 103..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1599contigEcto-sp13_S_contig1599:8571..16068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1599.4390.1mRNA_Ecto-sp13_S_contig1599.4390.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1599 4302..16167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1599.4390.1 ID=prot_Ecto-sp13_S_contig1599.4390.1|Name=mRNA_Ecto-sp13_S_contig1599.4390.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=662bp
MTRKNDVPSLWATQGGALGAAGGVVVATPATADGAVNRTVSGSVSDNLSR
GLDTDSEGGMELGDEATSSVGNGAEPVEDVNELMSAVSSHVEGGDVKDVK
GECFVRVRNATTGRDLQTETVSGGANIGFHETFVVPCQGPRDAVVLEVFF
REGEKAVAIGDAALPLDARVVGVSHPVLLSVKDKQGRNRGFLRVETFWLD
EAKPRKEVGEFYYKVVHPCGVHLRNQPWTGSDKSVHVLGCGEVFVACERQ
WHVGGEPVDGDCSPVFVKLLTSKDRWNRSGWCFETLCNGGGVSVPVLERA
SPPLRESGRYFFRVCNPEGARLHRKGDAKSKLRKELLPEGQVLEAGDKWT
PAGSPVTFVTVVNRRGFIIQRRGEKTVTNSAGEAAFEEVECPKSTVVSSV
GVPEHTAEPPTSSSAVGAADATPADGTAATASNGNGRNRRSGSSSPSKTR
DAKVDKIRAAEAAAAAASVRRLYRVREEAGVEATKTPDIVAPAADCIEAG
AAFYGKAEVVKHYEGIGDVAFVMRETDGLWVRANRPGVALMLDVFTNVHE
FGAYTYRVSHENGVVVRTAPGLDAPAVKPRRILPVTKLVNVSERLTRAED
IMNLSRPPIFLRQVLAGNDGWVFDRRGHTLVCEDVTVKSRIATANAITSE
AARLSLGGVAR*
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