prot_Ecto-sp13_S_contig15961.4375.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15961.4375.1
Unique Nameprot_Ecto-sp13_S_contig15961.4375.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15961.4375.1 vs. uniprot
Match: D7G9H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H2_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 5.570e-9
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   26 SWTGDLDMILMGMDTGTLGVARLRTGHL 53
            S TGDLDMILMGMDTGTLGVARLRTGHL
Sbjct:    3 SGTGDLDMILMGMDTGTLGVARLRTGHL 30
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BLAST of mRNA_Ecto-sp13_S_contig15961.4375.1 vs. uniprot
Match: A0A6H5K145_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K145_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.260e-8
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   26 SWTGDLDMILMGMDTGTLGVARLRTGHL 53
            S TGDLDMILMGMDTGTLGVARLRTGHL
Sbjct:   65 SGTGDLDMILMGMDTGTLGVARLRTGHL 92
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15961.4375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9H2_ECTSI5.570e-996.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K145_9PHAE2.260e-896.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15961contigEcto-sp13_S_contig15961:1056..1702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15961.4375.1mRNA_Ecto-sp13_S_contig15961.4375.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15961 1056..1702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15961.4375.1 ID=prot_Ecto-sp13_S_contig15961.4375.1|Name=mRNA_Ecto-sp13_S_contig15961.4375.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
CCVSHCGVTSERGTVTNHSGRAAGASWTGDLDMILMGMDTGTLGVARLRT
GHL
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