mRNA_Ecto-sp13_S_contig15912.4343.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: D8LHP5_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP5_ECTSI) HSP 1 Score: 308 bits (790), Expect = 3.900e-100 Identity = 157/174 (90.23%), Postives = 164/174 (94.25%), Query Frame = 1
Query: 7 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNAVNLPQGGGNFAPSEAGANDSCGNGDGGDGKI 528
KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWV+FLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFAT PA TQA+P XXXXXALPVNVNA+ SS +NAVNLPQGGG PSEAGA+ SCG+GDGGD +I
Sbjct: 252 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVAFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATCPAGTQATPPXXXXXALPVNVNAYSSSMVNAVNLPQGGGKLTPSEAGADGSCGDGDGGDERI 425
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A6H5JWQ5_9PHAE (PDEase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ5_9PHAE) HSP 1 Score: 245 bits (626), Expect = 9.760e-79 Identity = 124/142 (87.32%), Postives = 133/142 (93.66%), Query Frame = 1
Query: 103 QGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNAVNLPQGGGNFAPSEAGANDSCGNGDGGDGKI 528
QGDEEK LGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRN+AMW+AREKAG NSFDFATWPAATQA+P XXXXALPV+VNA SS +NAVNLPQGGGNFAP+EAGA+ SCG+GDGGD +I
Sbjct: 17 QGDEEKLLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNQAMWIAREKAGGNSFDFATWPAATQATPSPXXXXALPVDVNAHSSSMVNAVNLPQGGGNFAPNEAGADGSCGDGDGGDERI 158
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A836CJS2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS2_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.190e-39 Identity = 76/121 (62.81%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 7 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFD-FATWPAATQAS 366
K+C+KSADISHP R LHL+WT+ VIEEFFLQGDEEK GLE SPL DR T IA SQK FI+FLV PLF+SWVSFL+ P A C NL+ NEAMWVA+EK GD++ + P +T++S
Sbjct: 691 KICMKSADISHPTRPMFLHLQWTKAVIEEFFLQGDEEKRRGLEISPLMDRDTTAIADSQKGFINFLVKPLFKSWVSFLNTPEAQTCLTNLEVNEAMWVAKEKRGDDTLEALVPDPPSTRSS 811
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CJ15_9CILI (Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CJ15_9CILI) HSP 1 Score: 100 bits (249), Expect = 2.140e-21 Identity = 50/102 (49.02%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 10 VCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKA 315
+ +K ADI H A+ +LH RWT V+EEFF QGD EKSLGL S CDR+NTDI SQ F+ + PL+E W SFL DLC L+ N W K+
Sbjct: 614 MALKCADIGHSAKSPELHQRWTSMVMEEFFNQGDLEKSLGLPVSMYCDRNNTDIPKSQAGFLRNICIPLYEIWCSFLKSQQVDLCLGQLRENYQYWDQNMKS 715
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CK46_9CILI (Phosphodiesterase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CK46_9CILI) HSP 1 Score: 98.2 bits (243), Expect = 1.310e-20 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 1 LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADL-CTKNLKRNEAMWVAREK 312
L K+ +K+ADI H A+ T+LH RW R V+EEF++QGD EKSLG+ S CDR TDI+ SQ FI +V PLF + + L + C LK NE WV R K
Sbjct: 485 LFKLLMKAADIGHAAKSTELHERWCRLVVEEFYIQGDMEKSLGISVSMYCDRETTDISKSQAGFIRNIVYPLFSTINAILVSEKIETSCVSQLKTNELYWVMRRK 589
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2CNX6_9CILI (PDEase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CNX6_9CILI) HSP 1 Score: 96.3 bits (238), Expect = 6.180e-20 Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1 LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAAD-LCTKNLKRNEAMWVAREKA 315
L ++ IK+ADI H A+ +LH +W R V+EEF+ QGD EK LGL S CDR TDI+ SQ FI +V PLF + LD + C + LK NE+ WV R K+
Sbjct: 500 LLRLIIKAADIGHAAKSIELHEKWCRRVVEEFYTQGDIEKKLGLPVSMYCDRETTDISKSQAGFIKNIVLPLFNAVNFVLDSEFIESFCVEQLKVNESFWVQRRKS 605
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0G4EIH8_VITBC (Phosphodiesterase n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EIH8_VITBC) HSP 1 Score: 95.9 bits (237), Expect = 9.390e-20 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 16 IKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADL-CTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASP 369
+++ADI+H A+ LH +WT VIEEF+ QGD+EKSLGL SPLCDR+N D+ SQ FI ++V P+++ F C +NL RN W+ ++A D WP +P
Sbjct: 969 LRAADIAHAAKPLALHKQWTARVIEEFYNQGDKEKSLGLPVSPLCDRNNLDLRESQVGFIEYIVKPVYDLMNEFYCSEVVQHDCVENLNRNCEFWMEFDEAKDE------WPPKIDPAP 1081
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A1R2AMD1_9CILI (PDEase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AMD1_9CILI) HSP 1 Score: 94.7 bits (234), Expect = 2.100e-19 Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 7 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCP-AADLCTKNLKRNEAMW 297
KV IK+ADI H A+ DLH +W VIEEFFLQGD+EK LGL S CDR T+I SQ FI LV PLF + L+ D+C + L++N W
Sbjct: 484 KVVIKAADIGHTAKSIDLHKKWCEQVIEEFFLQGDQEKKLGLPISMYCDRETTNIGKSQSGFIKNLVLPLFIGLNNVLESKFIEDMCIRQLEQNHQYW 581
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0L0SCK3_ALLM3 (Phosphodiesterase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SCK3_ALLM3) HSP 1 Score: 93.2 bits (230), Expect = 7.700e-19 Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 10 VCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRHNTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKA 315
V IK ADI++P++ L +WT ++EEFFLQGDEE+ G+E S L DR+NTDI Q FI F+V PLF++W F+ L N++ N+A W A+ +A
Sbjct: 661 VAIKCADINNPSKPLHLCTQWTALIMEEFFLQGDEERRRGMEVSVLMDRYNTDIPKCQVGFIDFVVAPLFDAWALFMQEDIKPL-KNNIQNNKAYWKAKLEA 761
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Match: A0A0L0T1W0_ALLM3 (Phosphodiesterase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1W0_ALLM3) HSP 1 Score: 92.0 bits (227), Expect = 2.010e-18 Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1
Query: 7 KVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCDRH---NTDIASSQKNFISFLVNPLFESWVSFLDCPAADLCTKNLKRNEAMWVAREKAGDNSFDFATWPAATQASPXXXXXXALPVNVNAFRSSKLNA 435
+V +K +D+S+P R L WT ++EEF+LQGD+E+SLGL S DRH + ++A Q +FI +V PL+++W +FL P T N+ N W ++ DN T A A+ A P N R L+A
Sbjct: 559 EVAMKCSDLSNPTRPRPTSLEWTHRIMEEFYLQGDQERSLGLPISKFMDRHLSMDENVAKCQASFIDVIVGPLYQAWSTFLQSPITATMTGNIHANRTYWTHSARSRDNLALSKTTDALATATSLPSAVPAAP-NSTVTRMGSLHA 703 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15912.4343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15912.4343.1 >prot_Ecto-sp13_S_contig15912.4343.1 ID=prot_Ecto-sp13_S_contig15912.4343.1|Name=mRNA_Ecto-sp13_S_contig15912.4343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp LCKVCIKSADISHPARVTDLHLRWTRDVIEEFFLQGDEEKSLGLEPSPLCback to top mRNA from alignment at Ecto-sp13_S_contig15912:934..2686+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15912.4343.1 ID=mRNA_Ecto-sp13_S_contig15912.4343.1|Name=mRNA_Ecto-sp13_S_contig15912.4343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1753bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15912:934..2686+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15912:934..2686+ >mRNA_Ecto-sp13_S_contig15912.4343.1 ID=mRNA_Ecto-sp13_S_contig15912.4343.1|Name=mRNA_Ecto-sp13_S_contig15912.4343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15912:934..2686+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |