mRNA_Ecto-sp13_S_contig15895.4325.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: D7FUN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN1_ECTSI) HSP 1 Score: 847 bits (2188), Expect = 3.190e-298 Identity = 460/537 (85.66%), Postives = 476/537 (88.64%), Query Frame = 1
Query: 1 MAKVAQKDSGPDGLAAESTRLRVDGVIKDIISDHQGVIDKQIAT-DIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITSHPGFDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAA-GDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGDEREGNIAWSDERLPLTTLPQTKKPCGDGKAEGEGALVVAGGDIVDVAAVGAAAVNEKGKSTPAVVLTEKDSGAAAATEAAV--EGDGSSTGLGAPAGDLEAETAAMIQAERKERAEVLELSKKLVADFARFPPAEKDWEGVEEDG-GERSGGDLPRGGGAAGPAPTEEGRSSTAAVRGCCDDEARGSGDSGGREETSKAGGETRSFLPSEAAEAAPESPPTSAPTRKALALKIKGNEAFGGGDMQAAM 1596
M K +KDSG DG A ESTR RVDGVIKDIISDHQGV+DKQIAT DIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPP+GAPAEHPQRALQ+PHLSLLYLHHLKRWDFVSAFVLSGGLHALC LFTHDNLVVRMKAITSLVSIT+HPGFDWFAP PG IKG+ANNS I ARLHRALLGLRSEPAFISGLIANSWSGGAA DTDA AIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDG LRLSRPL RAIEEW G+G EREGNIAWS ERLPL TLP KK CGDGKAEGEGA+VVA G+IVDVAAVGAAAV EKGK TPA L EKDS EGDGSSTG APAGDLEAETAAMIQAERKERAEVLELSKKLVADFARFPPAE++WEGVEED GERSGGDLP GGGAA P PTEEG+SSTAA RGCCDDEARGSGDSGGREETS+AG ETRS LPSEA E AP+ PPTS TRKALALK++GNEAFG G MQAAM
Sbjct: 1 MTKCVRKDSGSDGPATESTRSRVDGVIKDIISDHQGVVDKQIATTDIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPEGAPAEHPQRALQIPHLSLLYLHHLKRWDFVSAFVLSGGLHALCPLFTHDNLVVRMKAITSLVSITAHPGFDWFAPLPGRIKGTANNSNAIDARLHRALLGLRSEPAFISGLIANSWSGGAAVDDTDATAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGTLRLSRPLFRAIEEWGGRGGEREGNIAWS-ERLPLPTLPHAKKTCGDGKAEGEGAIVVAKGEIVDVAAVGAAAVTEKGKMTPAAALMEKDSAXXXXXXXXXXXEGDGSSTGGRAPAGDLEAETAAMIQAERKERAEVLELSKKLVADFARFPPAEQEWEGVEEDDRGERSGGDLPLGGGAAAPTPTEEGKSSTAAGRGCCDDEARGSGDSGGREETSEAGEETRSSLPSEATEVAPQPPPTSVSTRKALALKLEGNEAFGEGQMQAAM 536
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A6H5KEI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI6_9PHAE) HSP 1 Score: 661 bits (1706), Expect = 3.130e-225 Identity = 340/393 (86.51%), Postives = 354/393 (90.08%), Query Frame = 1
Query: 145 KELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITSHPGFDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGDEREGNIAWSDERLPLTTLPQTKKPCGDGKAEGEGALVVAGGDIVDVAAVGAAAVNEKGKSTPAVVLTEKDSGAAAATEAAVEGDGSSTGLGAPAGDLEAETAAMIQAERKERAEVLELSKKLVADFARFPPAEKDWEGVEEDGGERSGGDLPRG 1323
KELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLV+RMKAITSLVSIT+HPGFDWFAPPPG IKG NNS T +ARLHRALLGLRSEPAFISGLIANSWSGGAA DTDA AI+AT+GGRG KTFPGACLMCLELLAMWLSWVRALHTVDG LRLSRPL RAIEEWAGKG EREGNI WSDERLPLTTLP TKKPCGDGKAEG GA+VVA G++VDV A+G A V +K K TPA VL EKDSGA G GAPAGD+EAETAAMIQAERKERAEVLELS+KLVADFARFPPAE++WEGVEEDGGERSGGDLPRG
Sbjct: 4 KELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVIRMKAITSLVSITAHPGFDWFAPPPGRIKGKTNNSNTTEARLHRALLGLRSEPAFISGLIANSWSGGAADDTDATAIKATDGGRGDKTFPGACLMCLELLAMWLSWVRALHTVDGTLRLSRPLFRAIEEWAGKGGEREGNIEWSDERLPLTTLPHTKKPCGDGKAEGGGAIVVASGEVVDVVAIGGADVTKKEKITPAAVLAEKDSGAXXXXXXXXXXXXXXXG-GAPAGDIEAETAAMIQAERKERAEVLELSRKLVADFARFPPAEQEWEGVEEDGGERSGGDLPRG 395
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A7S2W3C3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3C3_9STRA) HSP 1 Score: 161 bits (408), Expect = 8.810e-39 Identity = 101/266 (37.97%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 112 IDKQIATDIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLK--RWD-FVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSIT---SHPGFDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGDEREGNIAWSD 891
+D+ ++++ L L++KP+V + + + EDEAR +LF P DQA YP L+ +PP A HPQRA+Q+ HL+L+YLHHL+ W+ F S F+LSGGL +L L T NL +R +A+ L+ +T + GFDW+ PP + + NS LH LL L S +I GL+ NS S +FPG L CL+LLA WLSWVR + LR++R L AI W GD G +D
Sbjct: 48 VDEATKEPVVQR-LRSLWEKPRVDAISEAVGTLVLEDEARQLLFFPTEDQAKLYPKLLRSPPLDAEENHPQRAVQIEHLTLIYLHHLRFAEWEAFTSPFLLSGGLESLVGLLTCQNLYIRGQAVDCLLQVTVGDRNGGFDWWKPPS---QDATANS------LHEGLLSLGSNQGWIEGLLLNSDSS--------------------TSFPGGPLQCLQLLAFWLSWVRQVRCASHRLRVARSFLSAIPCW---GDTAAGGDGAAD 280
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: C1FJK6_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJK6_MICCC) HSP 1 Score: 142 bits (359), Expect = 1.120e-32 Identity = 93/259 (35.91%), Postives = 131/259 (50.58%), Query Frame = 1
Query: 139 IRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITSHPGFDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGDEREGNIAWSDERLPLTTL 915
IR L R Y P V+Q E L + +T + R +++ PD D A+ YP L+A+PP GAP +HPQ QV +L LYL H KRW F F+L+GGL AL + H NL +R +A+ +L ++T + W PP + GS+++ A LH +L L P + L+ N DAP FPGA + L LA + S++R H + LRLS LL + W+ + DE + DER TL
Sbjct: 34 IRAGLARQYANPPVAQTERCLRQNLTPERCRALVYWPDEDDASLYPALLADPPPGAPEDHPQFRCQVTYLMSLYLCHSKRWAFAKGFILAGGLRALVGMCAHPNLHLRGQAMETLGALTREELYPWHEPP---VAGSSSD-----AALHARMLELARTP-LVPNLVLNY---------DAP-------------FPGASSLALRTLAFFASYLRLRHCPNNVLRLSDDLLATLTRWSTRDDEHVSD----DERQLAKTL 257
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A5A8C4V7_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4V7_CAFRO) HSP 1 Score: 120 bits (300), Expect = 6.330e-25 Identity = 91/296 (30.74%), Postives = 128/296 (43.24%), Query Frame = 1
Query: 25 SGPDGLAAESTRLRVDGVIKDIISDHQGVIDKQIAT--DIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHD--QAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFT---HDNLVV--RMKAITSLVSITSHPGFDWFAPPPGCIK--GSANNSKTIKA------RLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGD 861
SGPD +A +D +++D+++ + +++ + L RLYD P V+ + + E R +LF P + AA Y +L+A P PA +P+R LQ + LL L H +RW +SA + G L L + + D R +A+ L TSHP F WF P G A +A RLH A+L L F++ LI G PG L LLA WLSW R +HT DG LRLS P+L A+ W D
Sbjct: 12 SGPDKVA-------LDALLEDVVAKLPSDRTESGLPFGELVSRSLRRLYDDPPVTACSISAGRPVGGHELRRVLFAPQVEAGDAAVYASLLAPLPASMPASNPRRRLQSEAVVLLQLRHAERWPLLSALIQHGALSCLAAALSDRSEDQAAAFRRAQALDLLTRATSHPAFPWFEPVAAAASRLGEAATPAGRRAAVEEATRLHSAMLALAPPRPFLADLIR----------------------LGSDPAPGVSSSALRLLAFWLSWARRMHTADGVLRLSAPMLAALRSWGNIPD 278
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A7S1NC57_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NC57_9EUGL) HSP 1 Score: 91.3 bits (225), Expect = 9.690e-18 Identity = 54/171 (31.58%), Postives = 94/171 (54.97%), Query Frame = 1
Query: 22 DSGPDGLAAESTRLRVDGVIKDIISDHQGVIDKQIAT-DIIRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPD-HDQAAHYPTLIANPPKG-APAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITS--HPGFDWF 519
+S P+G + E+ L +D + ++ + +IA + + + L + ++ P +S++ +L + ++ D+ R LF P D A YP L+ +PP G A HPQR +Q P L+LL+L H+ W+ + F+L GLH + LF +NL VR +A+ I++ FDW+
Sbjct: 8 ESMPEGKSEEA--LSMDPTFRKVLDSCLAGMPPEIAVREQLSQGLTKHWEYPPISEMRMMLQEELSLDDCRRCLFTPTAEDMAVRYPRLVMSPPPGLATDSHPQRKIQAPTLTLLFLAHVHHWELMRPFILGRGLHVIVVLFGDENLYVRGQAVEIFHRISNGYDTDFDWW 176
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A8J5XSU0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSU0_DIALT) HSP 1 Score: 94.0 bits (232), Expect = 2.370e-17 Identity = 70/242 (28.93%), Postives = 107/242 (44.21%), Query Frame = 1
Query: 139 IRKELLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRALQVPHLSLLYLHHLKRWDFVSAFVL-SGGLHALCSLFTHDNLVVRMKAITSLVSITSHPGFDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGD 861
I K L +++P + +LE VL ++++ ++AR ILFLP+ D Y + P G P EHP +Q + +LY+ H + + AFV+ +GGL L L DN+ + +A+ +L S+T FDW A PP R LL ++ A D + A EG + FPG L +LA WL +R LRL +L + W+ + D
Sbjct: 28 IEKTLTERWERPPMEKLEQVLRRKLSINDARRILFLPEVDDFFDYAVAFSQRPPGCPPEHPLSKIQPLFMGMLYMVHREDERLMRAFVVRAGGLRTLVGLLADDNVYIVSQALDTLYSLTGL--FDWHADPPS----------------DRPLLQCMADLAH----------------ADVGFVRALEGCFENR-FPGCSFRALTILAFWLGLIRFFFCKGRVLRLGPDVLDLLHRWSVRRD 234
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A383VCU8_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VCU8_TETOB) HSP 1 Score: 80.9 bits (198), Expect = 2.550e-12 Identity = 77/300 (25.67%), Postives = 122/300 (40.67%), Query Frame = 1
Query: 151 LLRLYDKPKVSQLEAVLFKRITEDEARHILFLPDHDQAAHYPTLIANPPKGAPAEHPQRAL---QVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITSHPGFDWFAPPP-----------------GCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGK-------------------------TFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGDEREGNIAWSDERLPLTTL 915
L R +P + L AVL + +T+++AR +LF P+ A YP L+A P P + A Q L L+L H + W + F+ +GGL +L SL H N ++ +A+ L+ T +DW +PP +G+ +NS + A +G A + +APA A+ +G +PG+ L+LLA +LSW+RA + G L+LS LL + W+ + + A S+ER L
Sbjct: 5 LQRRLQQPPTALLSAVLEQELTDEQARQLLFFPEPADMALYPKLLAGDP-ACPTDLSSSAANKGQAAVLGHLFLVHGRSWQRLRPFIEAGGLRSLVSLLGHPNRLLASQALQLLLLATHPDMYDWHSPPDHNSXXXXXXXXXXXEPQALAEGTPSNSLETAISSEGTASVSKQAAADAAGEEAQLHN------PEAPAAAASHPSQGPDRQLWLQLLALHEGPLLPRLLALSPDAWPGSGQQALQLLAFYLSWLRACWSQGGVLQLSPGLLSGLAAWSAR------STASSEERQLAAAL 291
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Match: A0A7S4FJA5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FJA5_9EUGL) HSP 1 Score: 77.0 bits (188), Expect = 1.360e-11 Identity = 59/181 (32.60%), Postives = 84/181 (46.41%), Query Frame = 1
Query: 325 RALQVPHLSLLYLHHLKRWDFVSAFVLSGGLHALCSLFTHDNLVVRMKAITSLVSITS-HPG-FDWFAPPPGCIKGSANNSKTIKARLHRALLGLRSEPAFISGLIANSWSGGAAGDTDAPAIEATEGGRGGKTFPGACLMCLELLAMWLSWVRALHTVDGALRLSRPLLRAIEEWAGKGD 861
R +Q P L+ LYL H W+ F GL L L NL +R + + L +++ + G FDW+ P ++ A + HR LL L S F+ + N I+ G+TFP LMCL+LLA WLS+VR T DG LRL + +L A++ A + D
Sbjct: 1 RKVQAPSLTCLYLLHHHDWERARPFAAGNGLRVLAGLVGDPNLYIRGQVVEMLHRLSNGYEGQFDWWDKPKD-LEDPAQGDVLV----HRRLLELHSTD-FLKNCLLN--------------IK-------GETFPEGSLMCLQLLAFWLSYVRHFWTKDGVLRLGQDVLDALKAHAARKD 154 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15895.4325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15895.4325.1 >prot_Ecto-sp13_S_contig15895.4325.1 ID=prot_Ecto-sp13_S_contig15895.4325.1|Name=mRNA_Ecto-sp13_S_contig15895.4325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=532bp MAKVAQKDSGPDGLAAESTRLRVDGVIKDIISDHQGVIDKQIATDIIRKEback to top mRNA from alignment at Ecto-sp13_S_contig15895:1263..4043+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15895.4325.1 ID=mRNA_Ecto-sp13_S_contig15895.4325.1|Name=mRNA_Ecto-sp13_S_contig15895.4325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2781bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15895:1263..4043+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15895:1263..4043+ >mRNA_Ecto-sp13_S_contig15895.4325.1 ID=mRNA_Ecto-sp13_S_contig15895.4325.1|Name=mRNA_Ecto-sp13_S_contig15895.4325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15895:1263..4043+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |