prot_Ecto-sp13_S_contig15819.4290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15819.4290.1
Unique Nameprot_Ecto-sp13_S_contig15819.4290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length245
Homology
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: D7FL67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL67_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 2.110e-69
Identity = 111/123 (90.24%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    7 EERSASASENFERGTAAISAAARPVWPEHVEVEDREGQDTIQVAVVLELARTATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQDSIDQDSDHGSGEIQIAVTYNTDDCVDQG 129
            EERSASA++N ERGTAA S AARPVWPE VEVEDREGQDTIQVAVVLELA TATKPREKCCHSIT IDVLDVRLRPGEKVTLWRPL SLGASTQDSID D DHG GEIQIAVTYNTDDCVDQG
Sbjct:   57 EERSASAADNSERGTAANSTAARPVWPEQVEVEDREGQDTIQVAVVLELASTATKPREKCCHSITMIDVLDVRLRPGEKVTLWRPLHSLGASTQDSIDNDGDHGFGEIQIAVTYNTDDCVDQG 179          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: D7FL80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL80_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.070e-42
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 0
Query:   25 SAAARPVWPEHVEVEDREGQDTIQVAVVLELARTATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGAST-QDSIDQDSDHGSGEIQIAVTYNTDDCVDQGYMYALFCGLVPLAFILSWSSRNTKSSFLPADKFL 163
            + A  P+WPE VEVEDR GQDT+Q+A+V  LA TAT  RE  CHS+  IDV D R RP E VTLW+ L+ + AS  +DS+D  S+H  G +QIA+TY +DDCVDQGY +A FCGLVPL  IL + +   +SS LPA KFL
Sbjct:   20 ATAPMPLWPEEVEVEDRAGQDTVQIALVFALAPTATAQRESFCHSVGVIDVRDFRSRPDETVTLWKSLRPVEASPHKDSLD--SNHDVGAVQIAITYYSDDCVDQGYTFAAFCGLVPLPLIL-FLANTKRSSLLPAGKFL 156          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: A0A6H5JN36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN36_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.000e-41
Identity = 77/135 (57.04%), Postives = 98/135 (72.59%), Query Frame = 0
Query:   30 PVWPEHVEVEDREGQDTIQVAVVLELARTATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGAST-QDSIDQDSDHGSGEIQIAVTYNTDDCVDQGYMYALFCGLVPLAFILSWSSRNTKSSFLPADKFL 163
            P+WPE VEVEDRE QDT+Q+A+V ELA TAT  RE  CHS+  I+V + R RP E VTLW+PL+ + AS  +DS+D  S+H  G +QIA+TY +DDCVD+GY +A FCGLVPL  IL + +   +SS  PA KFL
Sbjct:   31 PLWPEEVEVEDREDQDTVQIALVFELAPTATAQRESFCHSVGAINVGEFRSRPDETVTLWKPLRPVEASPHKDSLD--SNHDVGAVQIAITYYSDDCVDEGYTFAAFCGLVPLPLIL-FLANTKRSSLFPAGKFL 162          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: A0A6H5KCK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK4_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 4.030e-40
Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
Query:   59 ATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQDSIDQDSDHGSGEIQIAVTYNTDDCVDQG 129
            ATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQDSID D +HGSGEIQIAVTYNTDDCV QG
Sbjct:    4 ATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQDSIDNDGNHGSGEIQIAVTYNTDDCVAQG 74          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: A0A6H5K9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.190e-15
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    5 QREERSASASENFERGTAAISAAARPVWPEHVEVEDREGQDTIQVAVVLELART 58
            +REERSASA++N ERG+AA  AAARPVWPE +EVED+EGQDTIQ A+VLELA T
Sbjct:   56 EREERSASATDNSERGSAANPAAARPVWPEQLEVEDKEGQDTIQAALVLELAPT 109          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: A0A6H5JLN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN7_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.260e-13
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 0
Query:   34 EHVEVEDREGQDTIQVAVVLELARTATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQDSIDQDSDHGSGEIQIAVTYNTDDCVDQGYMYALFCGL 138
            E VE ED+   + ++VAV+ +L       R+   HSI +ID+   R +P ++V LW PLQ +  S  D  D       G IQI++ Y TDDCV QGYM+ LFCGL
Sbjct:   78 EEVEFEDKGVGEKVEVAVLFDLIAREMPKRQLFRHSIASIDLDAFRAQPEKRVELWLPLQPVN-SGNDLRDY------GSIQISIMY-TDDCVTQGYMFGLFCGL 174          
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Match: A0A6H5KYD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD5_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 8.630e-9
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   79 RLRPGEKVTLWRPLQSLGASTQDSIDQDSDHGSGEIQIAVTYNTDDCVDQGYMYALFCGLVPLAFI 144
            R +P  + TLW PL+ + +  +D          G ++IA TY++ DCV QGY++ALFCGLVPL+++
Sbjct:    5 RQQPDLRTTLWVPLRPVASHLEDPF--------GAVKIAATYHSKDCVPQGYLFALFCGLVPLSWM 62          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15819.4290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FL67_ECTSI2.110e-6990.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL80_ECTSI1.070e-4257.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN36_9PHAE2.000e-4157.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCK4_9PHAE4.030e-4094.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9Z1_9PHAE3.190e-1575.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN7_9PHAE5.260e-1342.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD5_9PHAE8.630e-942.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15819contigEcto-sp13_S_contig15819:4..3820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15819.4290.1mRNA_Ecto-sp13_S_contig15819.4290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15819 4..3820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15819.4290.1 ID=prot_Ecto-sp13_S_contig15819.4290.1|Name=mRNA_Ecto-sp13_S_contig15819.4290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp
MVPRQREERSASASENFERGTAAISAAARPVWPEHVEVEDREGQDTIQVA
VVLELARTATKPREKCCHSITTIDVLDVRLRPGEKVTLWRPLQSLGASTQ
DSIDQDSDHGSGEIQIAVTYNTDDCVDQGYMYALFCGLVPLAFILSWSSR
NTKSSFLPADKFLEHSPYHKENSTAHKNSNSNSNSNSNSSSSSSSSSSSS
SSSNKAITTSTLTRSSSSSNNNGISSDDIIDKDRDCGNNRDSEKL
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