prot_Ecto-sp13_S_contig15723.4223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15723.4223.1
Unique Nameprot_Ecto-sp13_S_contig15723.4223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 2.080e-60
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0
Query:    1 LNSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            LNSVAKARFDDASYYYWRSSTEAFAAAEK+KTK SEKD RK QRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ
Sbjct:  932 LNSVAKARFDDASYYYWRSSTEAFAAAEKDKTKTSEKDIRKAQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 1041          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A7S4D6V4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V4_HETAK)

HSP 1 Score: 102 bits (253), Expect = 9.260e-24
Identity = 54/113 (47.79%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAE----KEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V + RF DA+YYY+    E   AAE     +  ++SE   +K     + +++LA+LY A+ H++SFTTDPFT+LQPE+L QVSR+++N +G  + P GISR +TLYTLAKQ
Sbjct:   91 NAVMEGRFKDAAYYYYLLGAECLRAAEVLGEAKGGELSEAARKKALAEYDNYNKLANLYFAYQHIYSFTTDPFTNLQPEMLFQVSRYVLNLMGAEDAPYGISRVNTLYTLAKQ 203          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A7S3XTQ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTQ6_HETAK)

HSP 1 Score: 102 bits (253), Expect = 2.020e-23
Identity = 54/113 (47.79%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAE----KEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V + RF DA+YYY+    E   AAE     +  ++SE   +K     + +++LA+LY A+ H++SFTTDPFT+LQPE+L QVSR+++N +G  + P GISR +TLYTLAKQ
Sbjct:  153 NAVMEGRFKDAAYYYYLLGAECLRAAEVLGEAKGGELSEAARKKALAEYDNYNKLANLYFAYQHIYSFTTDPFTNLQPEMLFQVSRYVLNLMGAEDAPYGISRVNTLYTLAKQ 265          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A7R9U7I4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7I4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.130e-17
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   51 RLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            R ADLY+AF  + SFT+DPFT L PEVL QV+R+++N LG +  P GISR HTLYTLAKQ
Sbjct:    1 RHADLYYAFQRIRSFTSDPFTSLLPEVLFQVARYIINCLGSSPAPYGISRVHTLYTLAKQ 60          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A812QAW2_SYMMI (Ift122 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QAW2_SYMMI)

HSP 1 Score: 85.5 bits (210), Expect = 3.550e-17
Identity = 50/111 (45.05%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    1 LNSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEP-PRGISRAHTLYTLAKQ 110
            LN+V + RF DASYYYW  + +              + T    ++  EH+  ADLY+A+  + S+ TDPFT   PE+L QVSRF++NSLG +   P GIS+A TLYTLA+Q
Sbjct:  135 LNAVVETRFKDASYYYWLLAKDI------------REGTDSNYQLECEHN--ADLYYAYSSIQSYVTDPFTSQSPELLFQVSRFIINSLGSSGSIPYGISKAATLYTLARQ 231          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A8C2J6U0_CYPCA (Intraflagellar transport protein 122 homolog n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2J6U0_CYPCA)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-16
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V ++RF+DASYYYW  S +    A ++K +M +K              LA+LYH +H VH + ++PF+   PE+L  +SRFL ++L   + P GIS+  TLY LAKQ
Sbjct:  867 NAVVESRFNDASYYYWMLSMQCLDIAREKKEEMLKK--------FHSFQHLAELYHVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTR-DAPMGISKVDTLYALAKQ 966          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A8C2J8G4_CYPCA (Intraflagellar transport protein 122 homolog n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2J8G4_CYPCA)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-16
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V ++RF+DASYYYW  S +    A ++K +M +K              LA+LYH +H VH + ++PF+   PE+L  +SRFL ++L   + P GIS+  TLY LAKQ
Sbjct:  874 NAVVESRFNDASYYYWMLSMQCLDIAREKKEEMLKK--------FHSFQHLAELYHVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTR-DAPMGISKVDTLYALAKQ 973          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A8C1K7E3_CYPCA (Intraflagellar transport protein 122 homolog n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1K7E3_CYPCA)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-16
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V ++RF+DASYYYW  S +    A ++K +M +K              LA+LYH +H VH + ++PF+   PE+L  +SRFL ++L   + P GIS+  TLY LAKQ
Sbjct:  884 NAVVESRFNDASYYYWMLSMQCLDIAREKKEEMLKK--------FHSFQHLAELYHVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTR-DAPMGISKVDTLYALAKQ 983          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: UPI0019555BAA (intraflagellar transport protein 122 homolog isoform X1 n=2 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019555BAA)

HSP 1 Score: 82.8 bits (203), Expect = 3.510e-16
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHS--RLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V ++RF DASYYYW  S +    A ++  K       K + + + HS   LA+LYH +H VH + ++PF+   PE+L  +SRFL ++L   + P GIS+  TLY LAKQ
Sbjct:  851 NAVVESRFSDASYYYWMLSMQCLDIAREDSEK-------KEEMLKKFHSFQHLAELYHVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTR-DVPMGISKVDTLYALAKQ 953          
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Match: A0A8C2J8X8_CYPCA (Intraflagellar transport protein 122 homolog n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2J8X8_CYPCA)

HSP 1 Score: 82.4 bits (202), Expect = 4.750e-16
Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    2 NSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHSRLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISRAHTLYTLAKQ 110
            N+V ++RF+DASYYYW  S +    A ++ T+  E+  +K          LA+LYH +H VH + ++PF+   PE+L  +SRFL ++L   + P GIS+  TLY LAKQ
Sbjct:  795 NAVVESRFNDASYYYWMLSMQCLDIA-RDNTEKKEEMLKKFHSF----QHLAELYHVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTR-DAPMGISKVDTLYALAKQ 897          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15723.4223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW9_ECTSI2.080e-6096.36Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S4D6V4_HETAK9.260e-2447.79Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XTQ6_HETAK2.020e-2347.79Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9U7I4_9STRA3.130e-1765.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A812QAW2_SYMMI3.550e-1745.05Ift122 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A8C2J6U0_CYPCA1.010e-1641.28Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A8C2J8G4_CYPCA1.010e-1641.28Intraflagellar transport protein 122 homolog n=3 T... [more]
A0A8C1K7E3_CYPCA1.010e-1641.28Intraflagellar transport protein 122 homolog n=1 T... [more]
UPI0019555BAA3.510e-1641.44intraflagellar transport protein 122 homolog isofo... [more]
A0A8C2J8X8_CYPCA4.750e-1641.28Intraflagellar transport protein 122 homolog n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039857Intraflagellar transport protein 122 homologPANTHERPTHR12764WD REPEAT DOMAIN-RELATEDcoord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15723contigEcto-sp13_S_contig15723:2669..4087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15723.4223.1mRNA_Ecto-sp13_S_contig15723.4223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15723 2669..4088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15723.4223.1 ID=prot_Ecto-sp13_S_contig15723.4223.1|Name=mRNA_Ecto-sp13_S_contig15723.4223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
LNSVAKARFDDASYYYWRSSTEAFAAAEKEKTKMSEKDTRKTQRIAEEHS
RLADLYHAFHHVHSFTTDPFTDLQPEVLLQVSRFLVNSLGEAEPPRGISR
AHTLYTLAKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039857Ift122