prot_Ecto-sp13_S_contig15723.4222.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15723.4222.1
Unique Nameprot_Ecto-sp13_S_contig15723.4222.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: A0A6H5KTV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV2_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.570e-75
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0
Query:    1 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLM 117
            EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDA+FLPYALWLRD GRFDEALEAFQRAGRRDLSGAMTEQLM
Sbjct:  231 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAIFLPYALWLRDNGRFDEALEAFQRAGRRDLSGAMTEQLM 347          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: D7FXW9_ECTSI (Intraflagellar transport protein 122 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW9_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.550e-69
Identity = 115/117 (98.29%), Postives = 117/117 (100.00%), Query Frame = 0
Query:    1 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLM 117
            EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVK+QNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL+
Sbjct:  815 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKHQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLI 931          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: A0A812QAW2_SYMMI (Ift122 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QAW2_SYMMI)

HSP 1 Score: 107 bits (266), Expect = 9.490e-25
Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            GWQ AL ++VR+       +L+ CG+ L+    D LA+EAY K+ D   +MAL+VK Q W EA KL++E+  K+D +VFLPYA WL  + R ++A++A+ +AGR+DL+  + E+L
Sbjct:   19 GWQLALIDVVRATPTDVRDVLAFCGEILTQHNEDALAREAYTKLGDVNKLMALFVKRQMWVEAAKLADENEGKFDSSVFLPYAEWLIIQDRCEDAIQAYNKAGRQDLARKILEEL 133          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: A0A7S1UEE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEE7_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.740e-24
Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 0
Query:    1 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            EGW+ ALAE+  +  + ET+ L++CG+  +  G  D AK+ ++K+ D++ +M           AVKLSEEH  ++D ++FLPYA+WL  + RFD+AL A+ +AGR DLS  + EQL
Sbjct:  228 EGWEAALAEVAEACPRAETEALTICGRTFAEQGEFDHAKDVFVKLGDWSALMXXXXXXXXXXXAVKLSEEHEGEFDSSMFLPYAVWLALQDRFDDALRAYGKAGRPDLSFKLMEQL 343          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: A0A835ZL39_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL39_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.800e-23
Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 0
Query:    1 EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQLM 117
            EGWQ  L E+              CG     AG  +LA E   K++D++ +MAL+V+ Q+W  AVKLSEEH  K+D  VFLPYA WL   GR+D+AL+A++RAGR DLS     QL+
Sbjct:  785 EGWQTVLIEL--------------CGDTFVAAGEHELALEVLSKLEDYSALMALHVQRQDWVAAVKLSEEHAGKFDQKVFLPYAEWLAATGRYDDALDAYRRAGRADLSLRTLRQLI 887          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: F0XY87_AURAN (Intraflagellar transport protein 122 homolog n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY87_AURAN)

HSP 1 Score: 102 bits (255), Expect = 4.570e-23
Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEE--------HGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
             W + +A I RSVT  +  +L  C +    AG D LA+E Y K+DD   ++ LYV+ Q W+EA+KL+E+        H  K+D  ++LPYA WL    RFDEALEA++++GR D++  M EQL
Sbjct:  776 NWTEQMAAIARSVTGED--VLRQCARCFLAAGEDALAREVYAKLDDVEALLQLYVRKQQWAEAIKLAEDASAKFSNAHRAKFDQTLYLPYAEWLALHDRFDEALEAYRKSGRPDMAQHMMEQL 896          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: A0A7S2W302_9STRA (Intraflagellar transport protein 122 homolog n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W302_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.900e-21
Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            G  D L E+ R V K +T  L  C   L   G    AKE Y+KMDD  ++M L+V+   W +A  LSE+H  KY + V+LPYA WL ++ RFDEA  AF++A + + S  M ++L
Sbjct:  596 GCLDELIEVARIVDKKDTSALKKCAMYLREYGHHQYAKEVYLKMDDIQSLMKLHVELNKWEDAFLLSEQHKNKYAEDVYLPYARWLAEEDRFDEAQVAFKKAKQPEKSMMMLKEL 710          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: UPI0010FC96A8 (intraflagellar transport protein 122 homolog isoform X1 n=4 Tax=Scleractinia TaxID=6125 RepID=UPI0010FC96A8)

HSP 1 Score: 93.2 bits (230), Expect = 1.080e-19
Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCG---KELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            GW + L E+ R++ K +T+ L  C    K+L   G+   A E Y+K+ D   ++ L+V++++W EA +L+E+H    DD VF+PYA WL +  RFDEA EAF +AGRRD +  + EQL
Sbjct:  737 GWVEKLLEVGRNLNKADTEGLKQCAFYFKQLDQHGY---ASEMYIKLGDMKALLELHVESKHWDEAFELAEKHPEFKDD-VFVPYANWLAENDRFDEAQEAFHKAGRRDEAVKVLEQL 850          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: UPI0003C18954 (intraflagellar transport protein 122 homolog n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C18954)

HSP 1 Score: 92.0 bits (227), Expect = 2.720e-19
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            GW D L +I R + K E + LS C            A E Y KM D   ++ LYV+ Q W EA  L E+H  ++ D VF+PYA WL +  RF+EA +AF +AGR+D +  + EQL
Sbjct:  634 GWADMLIDIARKLDKAEREPLSKCALYFKKLEHHGYAAETYTKMGDLRALVRLYVETQQWDEAFALVEKH-LEFKDEVFVPYAQWLAENDRFEEAQKAFHKAGRQDEAVKVLEQL 747          
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Match: H3AZ66_LATCH (Intraflagellar transport protein 122 homolog n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AZ66_LATCH)

HSP 1 Score: 92.0 bits (227), Expect = 2.720e-19
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    2 GWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTNVMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAFQRAGRRDLSGAMTEQL 116
            GW D L +I R + K E + LS C            A E Y KM D   ++ LYV+ Q W EA  L E+H  ++ D VF+PYA WL +  RF+EA +AF +AGR+D +  + EQL
Sbjct:  662 GWADMLIDIARKLDKAEREPLSKCALYFKKLEHHGYAAETYTKMGDLRALVRLYVETQQWDEAFALVEKH-LEFKDEVFVPYAQWLAENDRFEEAQKAFHKAGRQDEAVKVLEQL 775          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15723.4222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTV2_9PHAE2.570e-7598.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXW9_ECTSI3.550e-6998.29Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A812QAW2_SYMMI9.490e-2544.35Ift122 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A7S1UEE7_9STRA3.740e-2443.10Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835ZL39_9STRA1.800e-2346.15Intraflagellar transport protein 122 homolog n=1 T... [more]
F0XY87_AURAN4.570e-2343.09Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A7S2W302_9STRA8.900e-2142.61Intraflagellar transport protein 122 homolog n=2 T... [more]
UPI0010FC96A81.080e-1942.37intraflagellar transport protein 122 homolog isofo... [more]
UPI0003C189542.720e-1941.74intraflagellar transport protein 122 homolog n=1 T... [more]
H3AZ66_LATCH2.720e-1941.74Intraflagellar transport protein 122 homolog n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 37..117
e-value: 5.3E-5
score: 25.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..106
IPR039857Intraflagellar transport protein 122 homologPANTHERPTHR12764WD REPEAT DOMAIN-RELATEDcoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15723contigEcto-sp13_S_contig15723:1281..2140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15723.4222.1mRNA_Ecto-sp13_S_contig15723.4222.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15723 1281..2140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15723.4222.1 ID=prot_Ecto-sp13_S_contig15723.4222.1|Name=mRNA_Ecto-sp13_S_contig15723.4222.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
EGWQDALAEIVRSVTKTETKILSVCGKELSLAGFDDLAKEAYMKMDDFTN
VMALYVKNQNWSEAVKLSEEHGRKYDDAVFLPYALWLRDKGRFDEALEAF
QRAGRRDLSGAMTEQLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039857Ift122