mRNA_Ecto-sp13_S_contig15702.4209.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15702.4209.1
Unique NamemRNA_Ecto-sp13_S_contig15702.4209.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A6H5JQ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ42_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 2.430e-167
Identity = 250/252 (99.21%), Postives = 251/252 (99.60%), Query Frame = 1
Query:    1 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAP CLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQE+SRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV
Sbjct:   53 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPTCLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEMSRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 304          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 1.410e-164
Identity = 249/252 (98.81%), Postives = 251/252 (99.60%), Query Frame = 1
Query:    1 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAP CLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQE+SRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNG+NKLFGGAQYHRALREFNFAIRHMNAPEV
Sbjct:  293 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPSCLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEMSRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGENKLFGGAQYHRALREFNFAIRHMNAPEV 544          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA)

HSP 1 Score: 373 bits (957), Expect = 9.520e-120
Identity = 182/252 (72.22%), Postives = 217/252 (86.11%), Query Frame = 1
Query:    1 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            VD  L RTVLV TKLDTK+PQF  G+DLQDF+ AP +Q+MY  +LGGPFFT+VPSGRVGR R+S Y SNEAFV GVRR+ERDD M VAAKLGP A   CLPRVGVSRLRRFLERRVE+CY+RNVARIVPLLQ+E+++AE RLL TE+E+ ALSL+ LKA A++YREHF RALG AIQGTI+APP++FGETLE+EQL+AGSFI+   VD DQW+RLME+EVGN  ++LFGGAQYHR LREF +A+RHM++PE+
Sbjct:  278 VDPSLERTVLVCTKLDTKIPQFSTGEDLQDFIEAPLMQKMYGSLLGGPFFTSVPSGRVGRGRESTYLSNEAFVAGVRRAERDDSMGVAAKLGPAAGAYCLPRVGVSRLRRFLERRVEDCYKRNVARIVPLLQRELTKAEARLLATEREMSALSLDQLKAGAEDYREHFVRALGSAIQGTIQAPPDQFGETLESEQLQAGSFIDAGRVDTDQWDRLMEVEVGNSAHRLFGGAQYHRVLREFAYAVRHMSSPEI 529          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A835Z2U6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U6_9STRA)

HSP 1 Score: 315 bits (806), Expect = 6.850e-102
Identity = 155/205 (75.61%), Postives = 182/205 (88.78%), Query Frame = 1
Query:  142 PFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            PFFT+VPSGRVGR R+SAYFSNEAFV GVRR+ERDD M VAAKLGP A   CLP VGVSRLRRFLERRVE+CYRRNVARIVPLLQ+E+++AEGRLL+TE+E+ ALSL+ LKASA+EYREHF RALG AIQGTI APP++FGETLE+EQL+AGSF++   VD D+WERLME+EVGN +++L GGAQYHR LREF FA+RHM +PE+
Sbjct:    1 PFFTSVPSGRVGRGRESAYFSNEAFVAGVRRAERDDSMHVAAKLGPTAGTQCLPHVGVSRLRRFLERRVEDCYRRNVARIVPLLQRELTKAEGRLLSTERELSALSLDQLKASAEEYREHFVRALGSAIQGTIHAPPDQFGETLESEQLQAGSFVDAGRVDGDKWERLMEVEVGNTNHRLVGGAQYHRVLREFAFAVRHMPSPEI 205          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.530e-98
Identity = 166/264 (62.88%), Postives = 198/264 (75.00%), Query Frame = 1
Query:    1 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRR------------NVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            VD  L RTVLV TKLDTKLPQF  G+DL+DF+ AP ++RMY  +LGGPFFT+VPSGRVGR R+SAYFSNEAFV GVRR+ERDD M VA+KLGP A   CLP VGVSRLRRFLERRVE+CY              NVARIVPLLQ+E+++AEGRLL TE+E+ ALSL+ LKASA+EY +                    FGETLE+EQL+AGSF++   VD D+W+RLME+EVGN  ++LFGGAQYHR LREF FA+RHM +PE+
Sbjct:  271 VDPSLERTVLVCTKLDTKLPQFSSGEDLEDFIDAPVMRRMYSGLLGGPFFTSVPSGRVGRGRESAYFSNEAFVAGVRRAERDDSMHVASKLGPTAGTQCLPHVGVSRLRRFLERRVEDCYXXXXXXXXXXXXXXNVARIVPLLQRELTKAEGRLLATERELSALSLDQLKASAEEYHQ--------------------FGETLESEQLQAGSFVDSGRVDGDKWDRLMEVEVGNTGHRLFGGAQYHRVLREFAFAVRHMPSPEI 514          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A4D9DCK2_9STRA (Dynamin-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCK2_9STRA)

HSP 1 Score: 308 bits (789), Expect = 7.080e-95
Identity = 155/251 (61.75%), Postives = 194/251 (77.29%), Query Frame = 1
Query:    4 DHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            D DL RTVLVTTK DTKLPQFG  +DL+DFLRAP IQ++Y  MLGGPF+T+VP GRVG  +DSA+ SNE FV  V++ E+ D   + A+LG   A   L RVGVSRLRRFLE+RVEECYRRNVA+IVPLLQ E+  AE +L  T QE++ALS++ LK +A+++RE F R+LG  IQGTI+A P ++GETLE EQLR GSF++  DV A++WER+M+ EVGN  ++LFGGAQYHRALREF  A+R M  P +
Sbjct:  326 DPDLRRTVLVTTKFDTKLPQFGTSEDLEDFLRAPLIQKLYPQMLGGPFYTSVPCGRVGMGKDSAFISNEVFVEAVKKVEKYDHARIEARLGSVGAAPLLQRVGVSRLRRFLEKRVEECYRRNVAKIVPLLQGELRSAEMKLGQTNQELEALSMDFLKKTANQFREFFLRSLGLVIQGTIQASPAQYGETLETEQLRGGSFLDAKDVPAERWERIMDEEVGNAHHRLFGGAQYHRALREFTLAVRLMKTPTI 576          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A7S3UW64_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW64_HETAK)

HSP 1 Score: 254 bits (649), Expect = 2.390e-75
Identity = 135/252 (53.57%), Postives = 181/252 (71.83%), Query Frame = 1
Query:    1 VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            VD DL+RTV+VTTKLDTK+PQFG   DL+DFLR   ++R+Y  MLGGPFFT+VPSGRVG  R++AY++NE FV G RR +  D+  +  +LG  A  + L +VG S LR FLE+RVE+ YRRNVA+IVP+LQ E+ + E +L T ++E+D+LS+E L+ +AD  +E FSR + +AIQG+I AP  +FGETLE E  RAG+F+    +  D    L+E  VG+   KL+GGAQYHR LREF  A+ +M  P+V
Sbjct:  253 VDPDLARTVIVTTKLDTKIPQFGEARDLKDFLRPQIMRRLYPAMLGGPFFTSVPSGRVGSTREAAYYTNEDFVLGCRRLQLADESQIRRRLGAGAGRV-LEQVGTSHLRSFLEKRVEDNYRRNVAKIVPMLQMEVGKTEAKLRTIQKELDSLSVEHLRQTADMLKEQFSRTIAQAIQGSIIAPASEFGETLETEHQRAGAFLNFEALHPDHIMDLLEECVGDESIKLYGGAQYHRCLREFGTAVANM--PDV 501          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A482SB77_9ARCH (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB77_9ARCH)

HSP 1 Score: 245 bits (625), Expect = 1.060e-74
Identity = 126/252 (50.00%), Postives = 181/252 (71.83%), Query Frame = 1
Query:    4 DHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIEDSDVDADQ-WERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            D  L+R+VLVTTKLDTKLPQF   +DL+DFL+AP I+ ++  +LGGPF+T+VPSGRVG +RD  + +NE FV  +RR+E+ D+    +KLG   A   L  VGVS+LR FLE R+E+ YRRNVA+IVPLLQ E+  ++ +L   ++E+ +LS+E L+ +A++YRE F++ L   IQGTI+A PE+FGETLE E ++ G+F+ + D    + ++RL+  E+ N   KL GGAQY+R L+EF  A++H  AP +
Sbjct:  147 DPQLTRSVLVTTKLDTKLPQFSEPEDLEDFLKAPLIRTLFSQLLGGPFYTSVPSGRVGNSRD--FDTNEDFVSALRRAEKRDRSYTLSKLGAMKAKPVLHTVGVSKLRSFLEARIEDSYRRNVAKIVPLLQTELKVSQSKLAQIDEELASLSMERLRDTANKYREKFAKELSNIIQGTIRANPEEFGETLEMEIMKGGAFLSEQDYSQSEIYQRLISHEIDNSQYKLLGGAQYYRTLKEFCLAVKHGVAPAI 396          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A7S0CK04_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK04_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.340e-65
Identity = 136/281 (48.40%), Postives = 174/281 (61.92%), Query Frame = 1
Query:    4 DHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARD----------SAYFSNEAFVHGVRRSERDDQMLV--------AAKLGPQAAPI--------CLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGSFIE----DSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            D DLSRTV+V TKLDTK+PQFG  DD+Q FLRA  + R+    LGGPFFT+VPSGRV R  D          SA+ S+E FVH    +E  D+ ++         A +      I         L  VG+SRLR FLE+RV+ECYRRNVA+IVP+LQ E + A  RL   E+E+DALS++ LKA AD++ + F  AL  AIQGTI APP  FGETL+ E L AGSF +       V    W+ L+  EVGN +++L+GG+QYHRA+REF  A R +  P +
Sbjct:   97 DPDLSRTVIVQTKLDTKIPQFGTMDDMQSFLRAEIVDRISPRKLGGPFFTSVPSGRVHRIDDEITDDDNFFNSAFESDEDFVHACVENEDSDRAVLRQRFKRKTGANINDDNEDIDAFEKGKHLLQCVGLSRLRVFLEQRVDECYRRNVAKIVPVLQAEHASATKRLEACERELDALSMDRLKAGADQFCDEFCSALREAIQGTIIAPPALFGETLKQENLAAGSFHDIQCCPMAVSPKIWQHLITTEVGNTEHRLYGGSQYHRAMREFGLATRCLRLPTI 377          
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Match: A0A7S1BLX2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLX2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 5.960e-63
Identity = 131/269 (48.70%), Postives = 169/269 (62.83%), Query Frame = 1
Query:    4 DHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRVGRARDS---------AYFSNEAFVHGVRRSERDDQMLVAAKLG---PQAAPICLPRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEIDALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAE--QLRAGSFIEDSD----VDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAPEV 756
            D DLSRTV+V TKLDTK+PQFG  DD++DFLRA  + R+    LGGPFFT+VPSGRV ++ D          A+ ++EAFV   + +E  DQ+++  +L    P AA   LP VG+S LR FLE RV +CYRRNVA+IVPLL  E    E RL   E ++ ALS+E LKA AD Y + F  +L  AI+G+I APP  +GE+L  E      GSF +  +    V    W+RL+  EVGN  +KL+GGAQYHR LREF  A R +  P +
Sbjct:  343 DPDLSRTVVVNTKLDTKVPQFGSTDDMEDFLRAQILDRLAPHKLGGPFFTSVPSGRVSKSLDDDNDGYEDGLAFATDEAFVDACKDNEESDQIVIRRRLKSSHPSAAEDLLPFVGLSYLRNFLEHRVYQCYRRNVAKIVPLLAAEREACEARLRRCEADLKALSVERLKAGADAYCDAFCASLREAIKGSILAPPSLYGESLGQEWSNCGVGSFRDVHECPLAVSQRAWDRLLVEEVGNCRHKLYGGAQYHRVLREFALATRCLRLPTI 611          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15702.4209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQ42_9PHAE2.430e-16799.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDP8_ECTSI1.410e-16498.81ARC5, dynamin-related protein involved in plastid ... [more]
A0A835YPI8_9STRA9.520e-12072.22Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A835Z2U6_9STRA6.850e-10275.61Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z9B7_9STRA4.530e-9862.88Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A4D9DCK2_9STRA7.080e-9561.75Dynamin-type G domain-containing protein n=2 Tax=M... [more]
A0A7S3UW64_HETAK2.390e-7553.57Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A482SB77_9ARCH1.060e-7450.00Dynamin-type G domain-containing protein (Fragment... [more]
A0A7S0CK04_9STRA1.340e-6548.40Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S1BLX2_9STRA5.960e-6348.70Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15702contigEcto-sp13_S_contig15702:500..3724 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score496.1
Seed ortholog evalue9.5e-138
Seed eggNOG ortholog2880.D8LDP8
Preferred nameARC5
Model size756
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006996,GO:0007031,GO:0007623,GO:0008017,GO:0008092,GO:0008150,GO:0009507,GO:0009526,GO:0009527,GO:0009536,GO:0009657,GO:0009658,GO:0009707,GO:0009941,GO:0009987,GO:0010020,GO:0015631,GO:0016020,GO:0016043,GO:0016462,GO:0016559,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019867,GO:0031090,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0042170,GO:0042579,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043572,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048285,GO:0048511,GO:0071840,GO:0098588,GO:0098805
Exons5
EggNOG free text desc.mitochondrial fission
EggNOG OGsCOG0699@1,KOG0446@2759
Cds size756
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462830.6469476-CDS-Ecto-sp13_S_contig15702:499..7121681462830.6469476-CDS-Ecto-sp13_S_contig15702:499..712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15702 500..712 -
1681462830.657248-CDS-Ecto-sp13_S_contig15702:1245..13441681462830.657248-CDS-Ecto-sp13_S_contig15702:1245..1344Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15702 1246..1344 -
1681462830.66532-CDS-Ecto-sp13_S_contig15702:2321..25131681462830.66532-CDS-Ecto-sp13_S_contig15702:2321..2513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15702 2322..2513 -
1681462830.6743345-CDS-Ecto-sp13_S_contig15702:2996..31501681462830.6743345-CDS-Ecto-sp13_S_contig15702:2996..3150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15702 2997..3150 -
1681462830.6856956-CDS-Ecto-sp13_S_contig15702:3626..37241681462830.6856956-CDS-Ecto-sp13_S_contig15702:3626..3724Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15702 3627..3724 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15702.4209.1prot_Ecto-sp13_S_contig15702.4209.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15702 500..3724 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15702.4209.1

>prot_Ecto-sp13_S_contig15702.4209.1 ID=prot_Ecto-sp13_S_contig15702.4209.1|Name=mRNA_Ecto-sp13_S_contig15702.4209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=252bp
VDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFF
TTVPSGRVGRARDSAYFSNEAFVHGVRRSERDDQMLVAAKLGPQAAPICL
PRVGVSRLRRFLERRVEECYRRNVARIVPLLQQEISRAEGRLLTTEQEID
ALSLESLKASADEYREHFSRALGRAIQGTIKAPPEKFGETLEAEQLRAGS
FIEDSDVDADQWERLMEIEVGNGDNKLFGGAQYHRALREFNFAIRHMNAP
EV
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mRNA from alignment at Ecto-sp13_S_contig15702:500..3724-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15702.4209.1 ID=mRNA_Ecto-sp13_S_contig15702.4209.1|Name=mRNA_Ecto-sp13_S_contig15702.4209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15702:500..3724- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGACCACGACCTGTCTCGCACGGTGCTGGTGACGACCAAGCTTGACAC CAAGCTGCCCCAATTCGGCGGCGGGGATGACCTGCAGGACTTCCTCCGGT AAAGTCAAGGAAGTTATACGCCAATCACGTCTAGCTACGTAGCTCTGCGA CGGCCTCTCCCTGCATGACCGGTCATGCCTCTCACCCTGTCCAACAGGGT TCGGGTTATTTTCGTTTCTTCAGTTTCTTAGTTTATATGTTTTCCAGAAG TAGATGGCAGTTGAGAACACGAGGGTTCGTTCATGTTCGTGGACGCATAC CTAAGAACTACTGCTGTTCCACCCTATTCTATAGCAACCCCGTACTCGAA AATACCAAGTACGTGGGAGCCTACGAGATAAACCAGGGATGAAGCAAGCA CCCAAGGGTTGCGAAAAATGAGGACGTTTGATAGTGCTGGCGATATACCG CACCTCCTCTATCATGCATCTCTCCGGGCATACGGTAGATCGTCCGTACG GCTGTCGAGGCCCGCACGGGTCCCAAAGTGCCTGGTACCTCCCCCCCTGC TCTTCGCCGGCATCCGTATGGCAGAGCCCCCTCTATCCAGCGCATGTACC GGTGCATGCTGGGAGGCCCGTTCTTCACCACCGTACCGTCTGGGCGAGTG GGGCGTGCCCGCGACTCGGCTTACTTCTCGAACGAAGCGTTTGTCCACGG GGTGCGCCGCTCTGAGCGCGACGACCAGGTGATTAGAGCCAGGGGTATTC GTATGCATGCTGCCTCCGAAACATGAGGCTTGTGGCAGGCAGTTGTGTAT CGTTGCCGCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGTGTTG TTCTGCGGGTTTGTGGTGGTGGAATGCTGCTAGTGCTTGGGATCGTGTCG CTTTACGCCAGTAGTAGAGGTGGTGAGAGCAAAAGATGGCCGTAGGCGTA GTGGTGTCAGGAAGTTGTTTGCTGGCCGTGGTACATGACATTTTGAGGTA GATCCAATTGCCGCCTCCGTCGGCATGACGGTACCAGAAGCTGCTCGCTG GCGATAGTAGCATATCGAACCTCACCGAAATTTTTATGTATGCGTTCATT TCTCCTCCTCCTCCGCTTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCCTCCTCCTCTTAATCCTAATCCTAACCCTCCCATGTTTTGTGCCT GCTGGAGACAGATGCTCGTTGCGGCAAAGCTAGGACCCCAGGCCGCGCCC ATCTGTCTCCCCCGCGTGGGCGTGTCCCGCCTGCGTCGGTTCTTGGAACG GCGCGTGGAAGAGTGCTACCGGAGGAACGTTGCGCGGATCGTTCCCTTGC TGCAGCAGGAGATATCGAGGGCGGAGGGAAGGCTGCTCACCACGGAGCAG GAGGTGATTATGTTGTCATTGTTACACACGGTTCATATTTTCTGTCTTGT TTAGGGTTGTTCATGAAGTTCTATTTATTTTTTTTCACCATGGGAATGCG TGCTAGTGTTTTTTCAAGTACCACGGTTTTCATTTTCTGTCTTTGTCTAG GGTTGTTCATGACGTACTATTTTTTAATATCGTTTTGTTTCTCGCCGTAG GGTTTCGTGCTGGTATTTAATTTCAAACAACACGGTTTTCCTTCTTTTTC TTTTCTTAGTTATTGCTCGCCATCAGGAACGGGATCGTTTGCTGCCGCTT TTGTTTTCTCTTTTTTGCCCTCTCTATGGTGGTTCTCCGGTATCCCTGCC GTGAGTGGTCCGTTCCAGCCGAATGCCGCACAACAGTCGTAAAACTAATT TTTTCATGGTGCTCTCAAAGGGTGATCGCGAATAGCATGCAACGTTGACG AATCTTCCGTGGTTGTCACGATGGCGTCGTGGCTTGACACTGATGGGTGG TGACGAGGTCAGAGGGCAGGGATGGAGGAGTATGGTGACATGCTCTGGTT CGTCAATGATGATGATGATGATGTTCGTTGGTGGGGTTTGTCGATGACAC CGGAGAGGTTCACGCTGCGCGATTGTGCCCATGGTTTTCGTTCACCGCTT CATTCTCGTTGCATATTGAATCCAAACCTCAAGCCTTCGGGGGGCGAAGA CCGATCAAGGAGGAACCCGCCTGTGTGACCATGGATTGGATCTCCCAAAT GCTGTGTGATTGTGTTTTGTCTTATTTAGTATGGCGACAGTCCCCTCATT ATTCGTGTTTCAGTGCATGTAGAGAACAACCAGACTTTTTAGCGGTTTTT TTCGTACTAGAACCATCCAGGGTCACACAGGAGGGGGTAAACACCGGGCC TTCTTTCTTCTCTTGTCTTGAGCGCTGACAAAGAGTAATGAACCGGGAAA AAAAATGCCTTGCTTTTTTCTTGTCTTCAGATCGATGCGCTGTCTTTGGA GAGCCTGAAGGCATCGGCGGACGAGTACCGCGAGCACTTTTCTCGGGCCC TAGGGCGCGCGATCCAGGGTACCATCAAGGTGCGCTGGTTGACTGCAGCG AAGCTTTTTTCTTTCCCGGCAAGGTAGGGCGAAGATCTTTTCGTCTCTCA GAATGGCAGTGCATCGCGAATGCTGCGGGTGGCATTCCGCCTTGTCCAGA GAACAACTAGTTCGATTTTAAAGAAAAAAAAGAGAGCGATAGCGTGGTGT ACCAGGTTTTGGTTTGCCTCTGAACCAGGTGGGTGTCAGGGGTCATCAGG CCTCTGTGTTTGTGTTGGCTGTTCGCTCTGTCACGAAAAGAAGGAAGATG CGGGGGCTCGACCACGAGATGGAGATGGTCTCGCCGATCATTTCTTGTTT CTGCTCATTTTTCTCTCGTTGCTTACGGCCCAAGAGTCTCGACGGGCACA CACGGCCGAGATAATGCCCACAACGGCAACAGACAACAACGACAATGACA CAACAACAGTAGTCGTAGCACATTACCAGTACCGAGCAACAGCAGCCCTT CAAGGCTAACCTTTCGAGAAAAAAAATGCGGGGCGTTGTTGACCCCCCAA AAAAAACAATAGGCCCCGCCCGAGAAATTCGGCGAGACGCTGGAGGCCGA GCAGCTGAGGGCCGGTTCGTTCATCGAGGACTCTGACGTGGACGCGGACC AGTGGGAGAGGTTGATGGAGATAGAGGTCGGCAACGGGGACAACAAGCTG TTCGGGGGAGCGCAGTACCACCGGGCTCTTCGCGAGTTCAACTTCGCGAT CCGGCACATGAACGCTCCTGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15702:500..3724-

>mRNA_Ecto-sp13_S_contig15702.4209.1 ID=mRNA_Ecto-sp13_S_contig15702.4209.1|Name=mRNA_Ecto-sp13_S_contig15702.4209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=756bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15702:500..3724- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGACCACGACCTGTCTCGCACGGTGCTGGTGACGACCAAGCTTGACAC
CAAGCTGCCCCAATTCGGCGGCGGGGATGACCTGCAGGACTTCCTCCGAG
CCCCCTCTATCCAGCGCATGTACCGGTGCATGCTGGGAGGCCCGTTCTTC
ACCACCGTACCGTCTGGGCGAGTGGGGCGTGCCCGCGACTCGGCTTACTT
CTCGAACGAAGCGTTTGTCCACGGGGTGCGCCGCTCTGAGCGCGACGACC
AGATGCTCGTTGCGGCAAAGCTAGGACCCCAGGCCGCGCCCATCTGTCTC
CCCCGCGTGGGCGTGTCCCGCCTGCGTCGGTTCTTGGAACGGCGCGTGGA
AGAGTGCTACCGGAGGAACGTTGCGCGGATCGTTCCCTTGCTGCAGCAGG
AGATATCGAGGGCGGAGGGAAGGCTGCTCACCACGGAGCAGGAGATCGAT
GCGCTGTCTTTGGAGAGCCTGAAGGCATCGGCGGACGAGTACCGCGAGCA
CTTTTCTCGGGCCCTAGGGCGCGCGATCCAGGGTACCATCAAGGCCCCGC
CCGAGAAATTCGGCGAGACGCTGGAGGCCGAGCAGCTGAGGGCCGGTTCG
TTCATCGAGGACTCTGACGTGGACGCGGACCAGTGGGAGAGGTTGATGGA
GATAGAGGTCGGCAACGGGGACAACAAGCTGTTCGGGGGAGCGCAGTACC
ACCGGGCTCTTCGCGAGTTCAACTTCGCGATCCGGCACATGAACGCTCCT
GAGGTG
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