prot_Ecto-sp13_S_contig15686.4202.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15686.4202.1
Unique Nameprot_Ecto-sp13_S_contig15686.4202.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length387
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15686.4202.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 9.120e-181
Identity = 336/381 (88.19%), Postives = 344/381 (90.29%), Query Frame = 0 
Query:    7 RQRHLPQHAGGPPAAGHAGSPIESILNPDEANENRSPGGDQAPAPAQQPQPHQVQETGAA-RSWLQGPLRDCARNAGDDGALARSLLDAGAPTNFFDRTGRSPLHWACTRGNTAVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPRNVPASLVAPALEAEELSWPMAAAIPHHNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRRVQXXXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKYSRGMFEADDIDLDGREGACSYVEDGQREDLARLVNQLVGIGEEGCFRLVVGFL 386
            +QRHLPQH GGPPAAGHAGSPIESILNPD ANENRSP  DQA          QVQETGAA R+WLQ PLRDCARNA DDGALARSLLDAGAPTNFFD TGRSPLHWACTRGNTAVV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPP NVPASLVAPALEAEELSWPMAA +P  NGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGR   XXXXXXXXXXXXXXXXXXXXX     ESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDK++RG+FEA+ IDLDGR GACS +EDGQ ED ARLVNQLVGIGEEGCFRLVVGFL
Sbjct:   24 KQRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPGNVPASLVAPALEAEELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXX-----ESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEAIDLDGRGGACSDMEDGQGEDFARLVNQLVGIGEEGCFRLVVGFL 399
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15686.4202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE89_ECTSI9.120e-18188.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 138..153
score: 44.25
coord: 227..241
score: 36.57
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 104..134
e-value: 0.0014
score: 27.9
coord: 249..279
e-value: 80.0
score: 12.1
coord: 211..240
e-value: 0.0038
score: 26.5
coord: 137..166
e-value: 0.75
score: 18.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 211..243
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 249..281
score: 8.603
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 137..159
score: 10.179
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 104..136
score: 13.143
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 191..350
e-value: 1.0E-19
score: 72.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 54..169
e-value: 1.6E-23
score: 85.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 86..288
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 77..159
e-value: 1.2E-12
score: 48.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 73..286
score: 35.703
NoneNo IPR availablePFAMPF13637Ank_4coord: 213..270
e-value: 2.3E-5
score: 24.8
NoneNo IPR availablePANTHERPTHR24173FAMILY NOT NAMEDcoord: 86..145
coord: 90..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15686contigEcto-sp13_S_contig15686:278..2517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15686.4202.1mRNA_Ecto-sp13_S_contig15686.4202.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15686 278..2517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15686.4202.1 ID=prot_Ecto-sp13_S_contig15686.4202.1|Name=mRNA_Ecto-sp13_S_contig15686.4202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=387bp
MLPFPCRQRHLPQHAGGPPAAGHAGSPIESILNPDEANENRSPGGDQAPA
PAQQPQPHQVQETGAARSWLQGPLRDCARNAGDDGALARSLLDAGAPTNF
FDRTGRSPLHWACTRGNTAVVHALLEAGADGFARDGSGKTPLHCAAQVGH
TTVVMVLLEFYGFAPIGLPPRNVPASLVAPALEAEELSWPMAAAIPHHNG
VESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRRVQA
CSALHLACQNAHAGCVQLLLAWGAQESAIAKDGSTPWSQLALAAETRPRG
CPRVAKTALLLNTARGARAWARRGWLLMLRDKYSRGMFEADDIDLDGREG
ACSYVEDGQREDLARLVNQLVGIGEEGCFRLVVGFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom