mRNA_Ecto-sp13_S_contig15607.4169.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI) HSP 1 Score: 695 bits (1793), Expect = 4.000e-245 Identity = 376/425 (88.47%), Postives = 392/425 (92.24%), Query Frame = 1
Query: 1 QVTHGEAKTVKHAGAIGNALHHRQPNHAKELGGSSGGVHARQTSQEEEETDMRPDCLKEDGTRVQQGGSYIVIGGRTVVVGMDSPAPSDSSQVNRSERKRLRVEAHKEDLISRVTTPSSGLASTSDE-EXXXXXXXXXXXQGPTTEGVAVVSGDGDGVNTVAASAEGRHQEQHGFDDASMVEVRSSPETDAAQVQRAAVSRGNFVDEQGGSLLPSSPRQDKLSNEGEGVSAWGVGEPVMGLADVDISSTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQV 1272
QVTHGEAK VKH+GAIGNALHHRQ NHA+ELGGSSGGV+ RQT QEEEETDMRPD L EDGT VQQGGS IV+GGRTVV+GMD+P PSDSSQ+NR RKRLRVEA+KED IS VTTPSSGL STSDE XXXXXXXXX GPT EGVAVVSGDGDGVNTVA EGRHQ+QHGFDDASMVEV S PETDA QVQRAAVS+ + VDEQ GSLLPSS +QDKLS EG G+SAWGVG+PV GLADVDI+STMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQ+
Sbjct: 32 QVTHGEAKAVKHSGAIGNALHHRQSNHAQELGGSSGGVNTRQTPQEEEETDMRPDKLVEDGTIVQQGGSRIVVGGRTVVIGMDTPPPSDSSQLNRGARKRLRVEAYKEDSISSVTTPSSGLRSTSDEVHGGXXXXXXXXXHGPTREGVAVVSGDGDGVNTVA---EGRHQQQHGFDDASMVEVPSPPETDAVQVQRAAVSQSSVVDEQDGSLLPSSLKQDKLSYEGGGLSAWGVGQPVTGLADVDITSTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQL 453
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A6H5L0M9_9PHAE (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M9_9PHAE) HSP 1 Score: 670 bits (1728), Expect = 3.910e-236 Identity = 357/424 (84.20%), Postives = 377/424 (88.92%), Query Frame = 1
Query: 1 QVTHGEAKTVKHAGAIGNALHHRQPNHAKELGGSSGGVHARQTSQEEEETDMRPDCLKEDGTRVQQGGSYIVIGGRTVVVGMDSPAPSDSSQVNRSERKRLRVEAHKEDLISRVTTPSSGLASTSDEEXXXXXXXXXXXQGPTTEGVAVVSGDGDGVNTVAASAEGRHQEQHGFDDASMVEVRSSPETDAAQVQRAAVSRGNFVDEQGGSLLPSSPRQDKLSNEGEGVSAWGVGEPVMGLADVDISSTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQV 1272
QVTHGEAK VKHAGA GNALHHRQPNHA+E GGSSGGV+ RQT +EEETDMRPD L+EDGTRV+ GGS IVIGGRT+V+GMDSP PSD+SQ+NR RKRLRVEAHK+D ISR TTPSSGL TSDE XXXXXXX VNTVAASAEGRHQ+QHGF+DASMVE+RSSPETDA QVQRAAVS+G FVDEQ GS+LPSS RQDK SNEG G+SAWG G+PV GLADVDI+STMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKG+DNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRL+PAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQ
Sbjct: 32 QVTHGEAKRVKHAGATGNALHHRQPNHAQEPGGSSGGVNTRQTPHKEEETDMRPDNLEEDGTRVRPGGSKIVIGGRTLVIGMDSPPPSDNSQLNRDARKRLRVEAHKKDSISRGTTPSSGLFLTSDEAHGGGXXXXXXXXXXXXXXXXXXXXXXXXVNTVAASAEGRHQQQHGFNDASMVELRSSPETDAVQVQRAAVSQGGFVDEQDGSMLPSSSRQDKFSNEGGGLSAWGAGKPVTGLADVDIASTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGNDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLLPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQA 455
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI) HSP 1 Score: 218 bits (555), Expect = 2.200e-59 Identity = 107/175 (61.14%), Postives = 132/175 (75.43%), Query Frame = 1
Query: 748 NGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQV 1272
+G+ + + +EESDR GRERAA ++ AM WKGY +HAWG DE+ P +KKG WGGMGVTLVDSLDTLWLMG+ EEFY RDWV+D LTF+ VSVFETTIR LGGLLSA++LS+DE+F +A +LAD L+PAF T+TGIP V+ + K GGS SVL+E+GTLQV
Sbjct: 416 DGISAHDATPQSKEESDRKGRERAAKVKEAMQHAWKGYEQHAWGADELAPRAKKGKQPWGGMGVTLVDSLDTLWLMGMKEEFYRARDWVKDKLTFSHASEVSVFETTIRELGGLLSAYDLSKDEIFKTKAIELADLLLPAFDTNTGIPTARVSFRSHKNSGGSKSVLAEIGTLQV 590
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA) HSP 1 Score: 200 bits (508), Expect = 4.320e-55 Identity = 98/178 (55.06%), Postives = 129/178 (72.47%), Query Frame = 1
Query: 751 GLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGG----GSYSVLSELGTLQV 1272
G +I+ + ESDRLGRERAA ++AAM WKGY + AWG DE+KP S + +NWGGMG+TL+DSLDTLWLMG+ +EF +WV+ HL F + VSVFET IR LGGLL+A+++S ++VFL++AKD+ RLMPAF T +GIP V+L++G GS S+LSELGT+QV
Sbjct: 59 GTFSDDIAPEVMAESDRLGRERAAAVKAAMQHAWKGYKDRAWGADELKPRSGRSQNNWGGMGMTLIDSLDTLWLMGMKDEFREATEWVKAHLNFAQPRSVSVFETNIRALGGLLAAYDVSGEKVFLDKAKDIGSRLMPAFNTPSGIPMNSVHLTSGTASNPSWTGSSSILSELGTMQV 236
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK) HSP 1 Score: 194 bits (493), Expect = 3.260e-52 Identity = 98/164 (59.76%), Postives = 122/164 (74.39%), Query Frame = 1
Query: 793 SDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNG--KTGG--GSYSVLSELGTLQV 1272
SD LGR+RA IRA W GY HAWG DEVKP S + ++NWGGM VT+VD+LDT+WLMGL +EF+ RD+++ HL+F + G VSVFETTIR LGGLLSA++LS D+VFL +A+DL RL AF T++GIPY V+L NG T G G ++LSELGTLQV
Sbjct: 163 SDALGRKRADAIRAGFKHAWDGYKAHAWGADEVKPQSGRRNENWGGMAVTMVDALDTIWLMGLKDEFWEARDYIKSHLSFGKTGQVSVFETTIRSLGGLLSAYDLSGDKVFLTKAEDLGGRLAKAFNTNSGIPYSTVHLQNGHGSTPGWTGGNAILSELGTLQV 326
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A7S2UB93_9STRA (alpha-1,2-Mannosidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB93_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.070e-51 Identity = 101/173 (58.38%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 769 ISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLS-----NGKTGGGSYSVLSELGTLQV 1272
I++ +R++SD L R R ++ AM WKGY HA+G DEV P+S +G +NWGGMG TLVDSLDTLWLMGL EEF+ GRDWVRDHL + V VSVFETTIR LGGLLSA++ S D+VFLE+A+DL RL+ AF + +GIPY V+LS N G ++LSE GTLQV
Sbjct: 233 ITDEIRKQSDDLARTRRVHVKNAMKHAWKGYKAHAFGQDEVLPISGRGHNNWGGMGTTLVDSLDTLWLMGLKEEFWEGRDWVRDHLEHDHVNSVSVFETTIRSLGGLLSAYDWSGDKVFLEKAQDLGKRLVRAFDSPSGIPYGQVSLSHPESHNNLGWAGGNAILSEAGTLQV 405
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A6U4HU98_9STRA (alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HU98_9STRA) HSP 1 Score: 196 bits (497), Expect = 2.790e-51 Identity = 102/191 (53.40%), Postives = 136/191 (71.20%), Query Frame = 1
Query: 715 GLADVDISSTMNGL-LEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTG----GGSYSVLSELGTLQV 1272
G A VD++S G + R + A ++++ RL +RA ++ AM WKGY +AWGYDE+ P+S + +NWGGMGVTLVDSLDTLWLM + +EFY RDWV++ L+F+ G VSVFETTIR LGGLLSA++LS D VFL++A+ L DRL+ AF T +GIP ++L+ G T G S SVL+E+GTLQV
Sbjct: 569 GFAAVDLASLNYGFDVTRTLPAAEKDKAARLAAQRAEKVKEAMQHAWKGYKSNAWGYDELLPVSGRKQNNWGGMGVTLVDSLDTLWLMDMKDEFYEARDWVKNSLSFDRAGTVSVFETTIRELGGLLSAYDLSGDAVFLDKARVLGDRLLKAFDTPSGIPAGRISLNAGPTSANLRGSSRSVLAEIGTLQV 759
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: B7S490_PHATC (alpha-1,2-Mannosidase (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S490_PHATC) HSP 1 Score: 187 bits (474), Expect = 1.660e-50 Identity = 94/174 (54.02%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 766 EISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAF-GTSTGIPYKLVNLSNGKTGG----GSYSVLSELGTLQV 1272
EI+E +R++SD++ R R ++ AM +W Y ++A+G DE+KP S GSD WGG G+TLVDSLDTLWLM L +EF+ RDWVRDHL + VG VSVFETTIR LGGLL+AF+ S+D VFL++A DL DRL+ AF G +TGIP+ VNL++G G ++++E GT+Q+
Sbjct: 10 EITETLRQQSDQVARSRRFHVQKAMRFVWGNYVKYAFGKDELKPQSASGSDQWGGQGITLVDSLDTLWLMNLKDEFWQARDWVRDHLDHSTVGSVSVFETTIRDLGGLLAAFDWSKDRVFLDKAVDLGDRLLRAFDGATTGIPWGEVNLASGNRKNIGWSGDNAIVAEFGTVQI 183
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A7S4T386_9STRA (alpha-1,2-Mannosidase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T386_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.060e-49 Identity = 91/184 (49.46%), Postives = 123/184 (66.85%), Query Frame = 1
Query: 736 SSTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTG-----GGSYSVLSELGTLQV 1272
S +NG I++++ +SD + R R + AM W GY HA+G+DE+ P SK +NW GMGVTL+DSLDTLW+M L EF+ RDWV++HL+ + VS FETTIR LGGLLSA+++S DE+FLERA DL RL+ AF + +GIPY VNL +G+ GG ++L+E G+LQV
Sbjct: 31 SEYVNGENPYTITKSITHQSDEVARSRLVHVENAMKHAWNGYKTHAFGHDELLPQSKHYQNNWDGMGVTLIDSLDTLWMMDLKNEFWECRDWVKEHLSHDIDKFVSTFETTIRSLGGLLSAYDMSGDEIFLERADDLGSRLLKAFDSPSGIPYGQVNLKSGEASNLPWIGGEVAILAEFGSLQV 214
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Match: A0A7S4K3S5_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K3S5_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.100e-49 Identity = 98/168 (58.33%), Postives = 120/168 (71.43%), Query Frame = 1
Query: 781 MREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSY----SVLSELGTLQV 1272
++ +SD++ R R I++AM W GY +A+G DE+ P SKKG D WGGMG TLVDSLDTLWLMGL EEF GRDWVRDHL ++VG VSVFET IR LGGLLSAF+LS DE FL +A DL RLM AF T +G+PY V+LS GK + ++L+E GTLQ+
Sbjct: 95 VKNQSDKVARSRREHIKSAMKHAWNGYRTYAFGKDELMPHSKKGRDAWGGMGTTLVDSLDTLWLMGLKEEFAEGRDWVRDHLDHDKVGKVSVFETAIRSLGGLLSAFDLSGDEAFLVQADDLGSRLMVAFDTPSGLPYAQVDLSTGKASDFHWLPNKAILAEFGTLQI 262 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15607.4169.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15607.4169.1 >prot_Ecto-sp13_S_contig15607.4169.1 ID=prot_Ecto-sp13_S_contig15607.4169.1|Name=mRNA_Ecto-sp13_S_contig15607.4169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp QVTHGEAKTVKHAGAIGNALHHRQPNHAKELGGSSGGVHARQTSQEEEETback to top mRNA from alignment at Ecto-sp13_S_contig15607:310..3988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15607.4169.1 ID=mRNA_Ecto-sp13_S_contig15607.4169.1|Name=mRNA_Ecto-sp13_S_contig15607.4169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3679bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15607:310..3988- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15607:310..3988- >mRNA_Ecto-sp13_S_contig15607.4169.1 ID=mRNA_Ecto-sp13_S_contig15607.4169.1|Name=mRNA_Ecto-sp13_S_contig15607.4169.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15607:310..3988- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |