prot_Ecto-sp13_S_contig15548.4126.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15548.4126.1
Unique Nameprot_Ecto-sp13_S_contig15548.4126.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 5.090e-102
Identity = 178/245 (72.65%), Postives = 196/245 (80.00%), Query Frame = 0
Query:    1 MLASPKQIILARTNGGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPH---VIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKRKCGGKTFADVVKRYTAESFATSMKAFERTWNQLKEVVKGTPCEGYINGYLYEG--HW----HAATMILGMRASQRVEASFSAIKNGSAVRKHSTFCAVKKRVDTVAEDLAVASRM 236
            M ASP+QI+LART GG+VIQDNTCL NR  D KL LF+GV+SENKT IFAQG LSNEQ S FDFANRFLLEI GG   H ++ T   P PH   VII DA AAMTS +AELMPH KHLY SWHISKNLKRKCGG+ FADV++RYTA SFATSMKAFER WN LKEVV+GTPCE YINGYL++   HW    H  TM LGM ASQRVE SFS IKNG AVRK+STF AV+KRV+TVAEDLA+ASRM
Sbjct:  841 MWASPEQIMLARTYGGIVIQDNTCLINR-YDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTP--PTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGGEVFADVIRRYTAASFATSMKAFERIWNNLKEVVEGTPCEEYINGYLFDQRKHWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRM 1082          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 4.420e-69
Identity = 126/248 (50.81%), Postives = 163/248 (65.73%), Query Frame = 0
Query:    1 MLASPKQIILARTNGGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMP--HAKHLYCSWHISKNLKRKC----GGKTFADVVKRYTAESFATSMKAFERTWNQLKEVVKGTPCEGYINGYLYEG--HW----HAATMILGMRASQRVEASFSAIKNGSAVRKHSTFCAVKKRVDTVAEDLAVASRM 236
            M ASP+QI+LART GGVVIQDNTCLTNR  + KL LF+GV+SENKT +FAQGF SNE    FDFAN+F L+ICGGHPK             VII D+ AAM   I  + P  H  HL CSWHI KN+K+KC      +  AD+++R+T  S ATS++AF+  W  ++++VKGT CE YI  +LYE   HW    H   M L M +SQRVE +FS +K G  +R++STF  V+ + + +A +L +AS M
Sbjct:   68 MWASPEQILLARTYGGVVIQDNTCLTNR-YNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPK-------------VIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKCLSILKSEKCADLLRRWTRASLATSIEAFDGVWTDVEDLVKGTDCEEYILKFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTM 301          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 7.660e-36
Identity = 91/276 (32.97%), Postives = 133/276 (48.19%), Query Frame = 0
Query:    6 KQIILARTNGGVVIQDNTCLTNRCVDV--------KLS---------------------------LFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAK-HLYCSWHISKNLKRKCG---GKTFADVVKRYTAESFATSMKAFERTWNQLKEVVKGTPCEGYINGYLYEGHWH------AATMILGMRASQRVEASFSAIKNGSAVRKHSTFCAVKKRVDTVAEDLAVASRM 236
            +Q + AR  GG+V+QDNT LTNR + +        K+S                           LF+GV+SENKTV+FAQGF S++ +  + +A +    ICGG P+             VII DA A MT  +   +P    HLYC WH+ KN+++ C    GK  +   +   A +FA + +A    W+++   VKG+ CE Y+ G+L   H H        TM L M A+QRVE  FS +K G  V +  +   VK  ++       +AS +
Sbjct:   94 QQQVFARQWGGIVLQDNTALTNRVLVLIRLIFATGKMSDEHPVRLRFIQPRAFASRSCRYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPE-------------VIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRLLHAAAFAATEEACSDAWSEIFRHVKGSDCEEYVTGHLLRHHRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLVRVKAELEKRIAGFTLASNL 356          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 1.720e-11
Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = 0
Query:   15 GGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKRKCGG 131
            GG +  D T   NR     + LF+GV+ EN++ I  QG L +E    F++         GG  + P           VI+ DA  AMTS +  +    +HL+C WH++KNL +KC G
Sbjct:  307 GGCIQMDTTVFANR-YGCPVLLFVGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRP----------KVILTDADVAMTSAVPSVWKGTQHLFCLWHVNKNLVKKCAG 412          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A015IP45_RHIIW (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IP45_RHIIW)

HSP 1 Score: 71.2 bits (173), Expect = 1.310e-10
Identity = 61/232 (26.29%), Postives = 112/232 (48.28%), Query Frame = 0
Query:    4 SPKQIILARTNGGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKN----LKRKCGGKTFADVVKRYTAESFATSMKAFERTWNQLKEVVKGTP-CEGYINGYLYEGH--WHAATMIL----GMRASQRVEASFSAIKNGSAVRKHSTFCAVKKRVD 224
            SP Q+ L R    +V+ DNTC TN+  ++ LS+FM  ++  +    A   + +E +S + +  + L++                 +P     D+   + + +A++ P+  H YC +HI +N    LK K G + F++  K + A   A  ++ FE+ W   K ++K  P C+ Y+   LY     W  A M      G++++Q VE+  + IK   ++   ST C V++ ++
Sbjct:   91 SPSQLELYRRFSDIVLNDNTCKTNK-YNMYLSVFMIKDNYGRFRNVANALIEDELSSTYTWILQCLVKATDNI------------IPKSFWTDSEPGLINAVAQVFPNTPHFYCMFHIWQNIIKHLKSKLG-ENFSNFSKAFYACRNALCIEIFEQRW---KFMIKSFPNCKRYMTRTLYNNRISWAKAYMPFQFNGGIQSTQSVESFNNIIKR--SLNSTSTLCEVEEAIN 303          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A0K9Q4I4_ZOSMR (Protein FAR1-RELATED SEQUENCE n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9Q4I4_ZOSMR)

HSP 1 Score: 70.9 bits (172), Expect = 1.840e-10
Identity = 61/219 (27.85%), Postives = 93/219 (42.47%), Query Frame = 0
Query:    3 ASPKQIILARTNGGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKRKCGGK-TFADVVKRY-----TAE----------SFATSMKAFERTWNQLKEVVKGTPCEGYINGYLYEGHWHAATMILGMRASQRVEASFSAIK 205
            A PK I   +  G  +  D T  TN+   + + +F GVN+  +TV+FA GFLSNE    F +      +  G +PK              II D  AAM + I+   P   H  C WHI+  +  K G      D ++R+     T+E          S+AT  K  E  W +    ++ + C  Y+  + + G          M+++QR E   S +K
Sbjct:  293 ADPKCIEEYKQYGEAITFDTTYNTNK-YKLIIGIFCGVNNHMRTVLFANGFLSNESTESFIWLFSEFKKCMGNYPK-------------TIITDQDAAMKTAISSEFPTTFHRLCKWHITHKMCDKVGTVYRNKDEMERFNKILNTSENINEFEKNWSSWATDNKLTENKWLKDMYTIRESWCPIYMTNHFFGG----------MQSTQRSEGMNSLVK 487          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: UPI000901D02A (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000901D02A)

HSP 1 Score: 70.1 bits (170), Expect = 2.850e-10
Identity = 58/210 (27.62%), Postives = 95/210 (45.24%), Query Frame = 0
Query:   15 GGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFA-NRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHIS----KNLKRKCGGKTFADVVKRYTAESFATSMKAFERTWNQLKEVVKGTPCEGYINGYLYEGHW---HAATMILG-MRASQRVEASFSAIKNGSAVRKHST 215
            G +++ D T  TN+  D+    F+G+N  NK V+F  GF+ NE+   F +  N FL  + G   KHP+           I+ D  A+M   I E+ P+++   C+WHI     KN+K+      F D+    T   +  ++  F   W+ + E       +   + Y+ +  W   H+     G + +SQR E +  +I      R HST
Sbjct:  265 GDLLVHDTTYRTNK-YDMICGPFVGMNHNNKNVMFGIGFILNEKTVSFIWLFNTFLKSMSG---KHPVT----------IMTDQSASMAKAIREVFPNSRQRLCTWHIGENSKKNIKKLRAMDGFTDLFN--TVLKYTYTIAGFNYYWSSMVEKYNCAEVKWIQDLYVIKDLWCPAHSKDYFSGGILSSQRSETTNKSISR----RLHST 454          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: UPI00053FFEC4 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FFEC4)

HSP 1 Score: 66.2 bits (160), Expect = 3.610e-9
Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   15 GGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKR 127
            G +++ D T  TN+  D+    F+G+N  NK V+F  GF+ NE+   F +     L+  GG  KHP+           I+ D  A+M   I E+ P+++   C+WHI +N K+
Sbjct:  178 GDLLVHDTTYRTNK-YDMICGPFVGMNHNNKNVMFGIGFILNEKAVSFIWLFNTFLKSMGG--KHPVT----------IMTDQSASMAKAIREVFPNSRQRLCTWHIGENSKK 277          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A6A3CN33_HIBSY (Protein FAR1-RELATED SEQUENCE n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CN33_HIBSY)

HSP 1 Score: 65.9 bits (159), Expect = 7.820e-9
Identity = 36/133 (27.07%), Postives = 62/133 (46.62%), Query Frame = 0
Query:   16 GVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKRKCGGKTFADVVKRYTAESFAT 148
            G VI  +T   +    + +   +GVN+ + T++FA   +++E +  F++  +  LE      K PI           ++ D   AM   I  ++P+AKH+ CSWH+S+N +   G   F     RY    + T
Sbjct:  185 GDVIAFDTTYKDNMYGLPIMPIVGVNNHHNTIVFATTIIADEMSQSFEWVLKNFLEAMMN--KSPIS----------VVTDGDRAMQRAIKSVIPYAKHILCSWHLSRNAQANIGDPKFTAAFSRYMTSKWTT 305          
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Match: A0A6A3B240_HIBSY (Protein FAR1-RELATED SEQUENCE n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B240_HIBSY)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-8
Identity = 52/219 (23.74%), Postives = 96/219 (43.84%), Query Frame = 0
Query:   16 GVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFAQGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAAMTSPIAELMPHAKHLYCSWHISKNLKRKCGGKTFADVVKRYTAESFATSMKAFERTWNQLKE----------VVKGTPCEGYINGYLYEGHWHAATMILGMRASQRVEASFSAIKNGSAVRKHSTFCAVKKRVD 224
            G VI  +T   +      +   +GVN  + T++FA   +++E +  F++  +  LE      K PI           ++ D   AM   I  ++P+AKH+ CSWH+S+N +   G   F     +  A  + T  K F+  W  +            + KG     +   YL  GH+ A      +R++QR E+  +++    A+++  T+  V + ++
Sbjct:  296 GDVITFDTTYKDNLYGRPIMPIVGVNHHHNTIVFATAIIADETSQSFEWVLQNFLEAMMN--KSPIS----------VVTDGDRAMQRAIKSVIPYAKHILCSWHLSRNAQANIGDPKFTAAFSKCMASWWTT--KEFDIQWRSVVSEFNVQKHPWVIEKGNTRHLWAQAYL-TGHFFA-----NIRSTQRCESMNASL--AIALKQKKTYLDVVRAIE 492          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15548.4126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K454_9PHAE5.090e-10272.65SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FLF6_ECTSI4.420e-6950.81Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5JEJ0_9PHAE7.660e-3632.97SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KG54_9PHAE1.720e-1134.19SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A015IP45_RHIIW1.310e-1026.29Uncharacterized protein n=1 Tax=Rhizophagus irregu... [more]
A0A0K9Q4I4_ZOSMR1.840e-1027.85Protein FAR1-RELATED SEQUENCE n=1 Tax=Zostera mari... [more]
UPI000901D02A2.850e-1027.62protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Beta ... [more]
UPI00053FFEC43.610e-932.74protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Beta ... [more]
A0A6A3CN33_HIBSY7.820e-927.07Protein FAR1-RELATED SEQUENCE n=1 Tax=Hibiscus syr... [more]
A0A6A3B240_HIBSY1.090e-823.74Protein FAR1-RELATED SEQUENCE n=2 Tax=Hibiscus syr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 18..124
e-value: 4.8E-13
score: 49.3
IPR031052FHY3/FAR1 familyPANTHERPTHR31669FAMILY NOT NAMEDcoord: 16..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15548contigEcto-sp13_S_contig15548:2817..4040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15548.4126.1mRNA_Ecto-sp13_S_contig15548.4126.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15548 1965..4040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15548.4126.1 ID=prot_Ecto-sp13_S_contig15548.4126.1|Name=mRNA_Ecto-sp13_S_contig15548.4126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MLASPKQIILARTNGGVVIQDNTCLTNRCVDVKLSLFMGVNSENKTVIFA
QGFLSNEQNSLFDFANRFLLEICGGHPKHPIVCTTCCPLPHVIINDAGAA
MTSPIAELMPHAKHLYCSWHISKNLKRKCGGKTFADVVKRYTAESFATSM
KAFERTWNQLKEVVKGTPCEGYINGYLYEGHWHAATMILGMRASQRVEAS
FSAIKNGSAVRKHSTFCAVKKRVDTVAEDLAVASRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom
IPR031052FHY3/FAR1