prot_Ecto-sp13_S_contig15514.4108.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15514.4108.1
Unique Nameprot_Ecto-sp13_S_contig15514.4108.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length280
Homology
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FN10_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN10_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 6.790e-184
Identity = 263/279 (94.27%), Postives = 266/279 (95.34%), Query Frame = 0
Query:    1 ANVAITVVSAFFFGSAGLDEFVGGNESGRRLSTGGGGGVVGPTLVVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            ANVAITVVSAF FGSAGLDEFVGG+ESGRRLSTGGGGGVVGP LVV GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAA+SALA G+WFGCLFPAFLC WTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTV G DG TYKASSCSDVMLDPPTRGMVHHLSC CGGHV SYNSACEYEG G WLALFWLASL WGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG
Sbjct:   48 ANVAITVVSAFSFGSAGLDEFVGGDESGRRLSTGGGGGVVGPALVVFGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAVSALAAGHWFGCLFPAFLCAWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVTGLDGTTYKASSCSDVMLDPPTRGMVHHLSCMCGGHVASYNSACEYEGRGLWLALFWLASLTWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 326          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FHM6_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM6_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.220e-62
Identity = 134/288 (46.53%), Postives = 174/288 (60.42%), Query Frame = 0
Query:    2 NVAITVVSAFFFGSAGLDEFVGGNESGRRLS-TGGGGGVVGPTLVVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLR-TVAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYEGHGF--W-LALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            NV ITV+SA FF + G       N   RRLS     G ++ P L+V+ ++ + W  A   L+++ +  +R+L+ AY+  AG+ G+AA +AL  G     +  A +C      + K QSR+RFG+ANLKVA LAV+SMP T+R  L MS VQV+W +LSA AAGG+ A+    V G DG TY +  C D+ +     G         LSC CGG V+S +S CE+ G GF  W LA FWL S+ W   V+RNVVTATV GSVASWW+S   D S VRGA YRATH SFG
Sbjct:  157 NVCITVLSAIFFKAEGAKAV---NAHHRRLSGDSAAGSLLAPLLMVVAMIAVGWGVACMALYSLASCPKRMLQAAYVGFAGVWGVAAAAALWNGITVIAVVCALVCAIVAWVFWKNQSRLRFGAANLKVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAGGSFAAFSPVVVGADGTTYSSLECQDITVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSG-GFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPG-DTSSVRGAFYRATHSSFG 439          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FHM4_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 4.770e-56
Identity = 113/243 (46.50%), Postives = 149/243 (61.32%), Query Frame = 0
Query:   45 VVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRT-VAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYE-GHGFW-LALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            +V+ ++ + W  A   L+++ +Y +R+L+ AY+  AG+ G+AA +AL  G     +  A +C      + K QSR+RFG+ANLKVA LAV+SMP T+R  L MS VQV+W +LSA AA G+ A+    V G DG TY +  C D+ +     G         LSC CGG V+S +S CE+  G   W LA FWL S+ W   V+RNVVTATV GSVASWW+S   D   VRGA YRATH SFG
Sbjct:    1 MVVVMIAVGWGVACMALYSLASYPKRMLQAAYVGFAGVWGVAAAAALWNGITVIAVVCALVCAIVAWVFWKNQSRLRFGAANLKVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAWGSFAAFSPMVVGADGTTYSSLECQDIAVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSSGFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPG-DTRSVRGAFYRATHSSFG 242          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D8LGQ1_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ1_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.170e-46
Identity = 116/313 (37.06%), Postives = 165/313 (52.72%), Query Frame = 0
Query:    2 NVAITVVSAFFFGSAGLDEFVGGNESG---RRL--------------------STGGGGGVVGPTLVVLGI--VGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAA-----ISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            NV +TV++AF+FG  GL+     + SG   RRL                       G GG     ++V G+  +G+A   + G+LH++       L  +Y    GI G AA     + A+     F  +F   L         +R+ R  FGSANLKVA +A++ MPWT R+ +LM  VQ LW +++A+AA G+  +L TVA PDG++++A  C D        G          SC C G  +S +  CE+ G G  L + WL S+AWG  VIRNVV  TV+GSVASWW++ + D++PV+GA +RAT  SFG
Sbjct:   57 NVLVTVLAAFWFGFEGLEALANDSLSGQGRRRLMHXXXXXXXXXXXXXXXXGEGEEGHGGAHLSNVIVGGVALLGIASLVSAGMLHSLFRCGRGFLAASYAVFVGIIGAAAGVMFLVGAVPAAVVFSVVFVFGLVA-----LRRRKHRFAFGSANLKVASMAIRDMPWTYRSAILMGIVQFLWCMVAAIAALGSFVALETVAAPDGSSHRAIYCLDFADGGDGGGGGEDVFAAQNSCVCNGTKIS-DGECEFSGLGLPLMMVWLCSMAWGCGVIRNVVACTVSGSVASWWFTPEEDSTPVKGAFHRATTSSFG 363          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A6A5ABA6_9STRA (Choline transporter-like protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABA6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.020e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   96 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 294          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: W4G5R8_9STRA (Choline transporter-like protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4G5R8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.760e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   96 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 294          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397AQR1_9STRA (Choline transporter-like protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQR1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.120e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   86 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 284          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397EZJ6_9STRA (Choline transporter-like protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZJ6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.150e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  137 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 364          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397BUA5_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BUA5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.900e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  314 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 541          
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A418CRM6_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CRM6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.590e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 0
Query:   48 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 279
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  638 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 865          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FN10_ECTSI6.790e-18494.27Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
D7FHM6_ECTSI1.220e-6246.53Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM4_ECTSI4.770e-5646.50Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D8LGQ1_ECTSI1.170e-4637.06Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
A0A6A5ABA6_9STRA1.020e-1131.06Choline transporter-like protein n=2 Tax=Aphanomyc... [more]
W4G5R8_9STRA1.760e-1131.06Choline transporter-like protein n=4 Tax=Aphanomyc... [more]
A0A397AQR1_9STRA2.120e-1131.06Choline transporter-like protein n=8 Tax=Aphanomyc... [more]
A0A397EZJ6_9STRA6.150e-1126.61Choline transporter-like protein n=7 Tax=Aphanomyc... [more]
A0A397BUA5_9STRA6.900e-1126.61Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A418CRM6_9STRA7.590e-1126.61Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007603Choline transporter-likePFAMPF04515Choline_transpocoord: 103..279
e-value: 6.9E-28
score: 97.8
IPR007603Choline transporter-likePANTHERPTHR12385CTL TRANSPORTERcoord: 2..279
NoneNo IPR availablePANTHERPTHR12385:SF4PROTEIN PNS1coord: 2..279
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..144
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 74..91
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
NoneNo IPR availableTMHMMTMhelixcoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15514contigEcto-sp13_S_contig15514:1..3696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15514.4108.1mRNA_Ecto-sp13_S_contig15514.4108.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15514 1..3696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15514.4108.1 ID=prot_Ecto-sp13_S_contig15514.4108.1|Name=mRNA_Ecto-sp13_S_contig15514.4108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
ANVAITVVSAFFFGSAGLDEFVGGNESGRRLSTGGGGGVVGPTLVVLGIV
GLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCL
FPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGV
QVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHH
LSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTG
SVASWWYSADRDASPVRGALYRATHGSFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like