mRNA_Ecto-sp13_S_contig15514.4108.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15514.4108.1
Unique NamemRNA_Ecto-sp13_S_contig15514.4108.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FN10_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN10_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 6.790e-184
Identity = 263/279 (94.27%), Postives = 266/279 (95.34%), Query Frame = 1 
Query:    1 ANVAITVVSAFFFGSAGLDEFVGGNESGRRLSTGGGGGVVGPTLVVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            ANVAITVVSAF FGSAGLDEFVGG+ESGRRLSTGGGGGVVGP LVV GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAA+SALA G+WFGCLFPAFLC WTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTV G DG TYKASSCSDVMLDPPTRGMVHHLSC CGGHV SYNSACEYEG G WLALFWLASL WGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG
Sbjct:   48 ANVAITVVSAFSFGSAGLDEFVGGDESGRRLSTGGGGGVVGPALVVFGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAVSALAAGHWFGCLFPAFLCAWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVTGLDGTTYKASSCSDVMLDPPTRGMVHHLSCMCGGHVASYNSACEYEGRGLWLALFWLASLTWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 326
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FHM6_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM6_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.220e-62
Identity = 134/288 (46.53%), Postives = 174/288 (60.42%), Query Frame = 1 
Query:    4 NVAITVVSAFFFGSAGLDEFVGGNESGRRLS-TGGGGGVVGPTLVVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLR-TVAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYEGHGF--W-LALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            NV ITV+SA FF + G       N   RRLS     G ++ P L+V+ ++ + W  A   L+++ +  +R+L+ AY+  AG+ G+AA +AL  G     +  A +C      + K QSR+RFG+ANLKVA LAV+SMP T+R  L MS VQV+W +LSA AAGG+ A+    V G DG TY +  C D+ +     G         LSC CGG V+S +S CE+ G GF  W LA FWL S+ W   V+RNVVTATV GSVASWW+S   D S VRGA YRATH SFG
Sbjct:  157 NVCITVLSAIFFKAEGAKAV---NAHHRRLSGDSAAGSLLAPLLMVVAMIAVGWGVACMALYSLASCPKRMLQAAYVGFAGVWGVAAAAALWNGITVIAVVCALVCAIVAWVFWKNQSRLRFGAANLKVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAGGSFAAFSPVVVGADGTTYSSLECQDITVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSG-GFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPG-DTSSVRGAFYRATHSSFG 439
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D7FHM4_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM4_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 4.770e-56
Identity = 113/243 (46.50%), Postives = 149/243 (61.32%), Query Frame = 1 
Query:  133 VVLGIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRT-VAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYE-GHGFW-LALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            +V+ ++ + W  A   L+++ +Y +R+L+ AY+  AG+ G+AA +AL  G     +  A +C      + K QSR+RFG+ANLKVA LAV+SMP T+R  L MS VQV+W +LSA AA G+ A+    V G DG TY +  C D+ +     G         LSC CGG V+S +S CE+  G   W LA FWL S+ W   V+RNVVTATV GSVASWW+S   D   VRGA YRATH SFG
Sbjct:    1 MVVVMIAVGWGVACMALYSLASYPKRMLQAAYVGFAGVWGVAAAAALWNGITVIAVVCALVCAIVAWVFWKNQSRLRFGAANLKVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAWGSFAAFSPMVVGADGTTYSSLECQDIAVPSSPYGGGETTAGSGLSCHCGGEVISSDSGCEFSSGFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPG-DTRSVRGAFYRATHSSFG 242
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: D8LGQ1_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ1_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.170e-46
Identity = 116/313 (37.06%), Postives = 165/313 (52.72%), Query Frame = 1 
Query:    4 NVAITVVSAFFFGSAGLDEFVGGNESG---RRL--------------------STGGGGGVVGPTLVVLGI--VGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAA-----ISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRG-----MVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            NV +TV++AF+FG  GL+     + SG   RRL                       G GG     ++V G+  +G+A   + G+LH++       L  +Y    GI G AA     + A+     F  +F   L         +R+ R  FGSANLKVA +A++ MPWT R+ +LM  VQ LW +++A+AA G+  +L TVA PDG++++A  C D        G          SC C G  +S +  CE+ G G  L + WL S+AWG  VIRNVV  TV+GSVASWW++ + D++PV+GA +RAT  SFG
Sbjct:   57 NVLVTVLAAFWFGFEGLEALANDSLSGQGRRRLMHXXXXXXXXXXXXXXXXGEGEEGHGGAHLSNVIVGGVALLGIASLVSAGMLHSLFRCGRGFLAASYAVFVGIIGAAAGVMFLVGAVPAAVVFSVVFVFGLVA-----LRRRKHRFAFGSANLKVASMAIRDMPWTYRSAILMGIVQFLWCMVAAIAALGSFVALETVAAPDGSSHRAIYCLDFADGGDGGGGGEDVFAAQNSCVCNGTKIS-DGECEFSGLGLPLMMVWLCSMAWGCGVIRNVVACTVSGSVASWWFTPEEDSTPVKGAFHRATTSSFG 363
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A6A5ABA6_9STRA (Choline transporter-like protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABA6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.020e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   96 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 294
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: W4G5R8_9STRA (Choline transporter-like protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4G5R8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.760e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   96 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 294
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397AQR1_9STRA (Choline transporter-like protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQR1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.120e-11
Identity = 73/235 (31.06%), Postives = 114/235 (48.51%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRF-YLKR-QSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWL-ASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G++G A  F+   +  ++  +E +++ A     G+    AI ++    + G  F   L G  +   Y+   Q+RI F SA+LK+A +A+ +        LL   VQV W++  +++A G     R+ A P        SC        +RG +      CGG              GF + +F+L  S+ WG  VI+NV+T TV G+VA+WWY+A R  S V G+LYR+   SFG
Sbjct:   86 GLIGFAVVFSALWIQVLMACAENMIRFALWMNVGMMFGFAIMSMFVNPFMGLFF---LLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGVYQLFRS-ADP--------SCEQ----EESRGEL------CGGA-------------GFNVTIFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFG 284
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397EZJ6_9STRA (Choline transporter-like protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZJ6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.150e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  137 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 364
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BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A397BUA5_9STRA (Choline transporter-like protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BUA5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.900e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  314 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 541
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Match: A0A418CRM6_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CRM6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.590e-11
Identity = 62/233 (26.61%), Postives = 106/233 (45.49%), Query Frame = 1 
Query:  142 GIVGLAWAFAWGVLHAVINYSERILKIA-YLSLAGISGMAAISALATGYWFGCLFPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHHLSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFG 837
            G+  +A   +  +L   I Y+ ++++IA + S+    G AA + +   Y    +    +  + + +    Q RI F +ANL+ AG A++  P T     +   VQ+ WV + A A  G    L   + P   +  A+  S        + + ++  CT  G     N   + +   +    F L S  WG  V +N++ ATV G+VA+WW+S+D   +    +L RAT  S G
Sbjct:  638 GLTVIAAVLSLAMLSFTIRYARQMIQIALWWSVVMFFGFAAFAVIKKNYTVA-IVTGIIGLFALCYAYAVQDRIPFAAANLRAAGAAIRKHPSTHVVAFVFLLVQIAWVFVWAFAVVGITNKLTENSTPAPTSRTATVASGGRCIASAQCLTNY--CT-SGVCKEPNVYAQLKSTSYVAYFFLLLSFFWGVQVFKNIIHATVAGTVATWWFSSDSKGA-TGASLGRATTTSLG 865
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15514.4108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FN10_ECTSI6.790e-18494.27Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
D7FHM6_ECTSI1.220e-6246.53Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM4_ECTSI4.770e-5646.50Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D8LGQ1_ECTSI1.170e-4637.06Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
A0A6A5ABA6_9STRA1.020e-1131.06Choline transporter-like protein n=2 Tax=Aphanomyc... [more]
W4G5R8_9STRA1.760e-1131.06Choline transporter-like protein n=4 Tax=Aphanomyc... [more]
A0A397AQR1_9STRA2.120e-1131.06Choline transporter-like protein n=8 Tax=Aphanomyc... [more]
A0A397EZJ6_9STRA6.150e-1126.61Choline transporter-like protein n=7 Tax=Aphanomyc... [more]
A0A397BUA5_9STRA6.900e-1126.61Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A418CRM6_9STRA7.590e-1126.61Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15514contigEcto-sp13_S_contig15514:1..3696 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score525.0
Seed ortholog evalue2.1e-146
Seed eggNOG ortholog2880.D7FN10
Model size840
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.choline transmembrane transporter activity
EggNOG OGsKOG1362@1,KOG1362@2759
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-25_001120.1
Cds size840
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462823.1210506-CDS-Ecto-sp13_S_contig15514:0..271681462823.1210506-CDS-Ecto-sp13_S_contig15514:0..27Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15514 1..27 +
1681462823.1319063-CDS-Ecto-sp13_S_contig15514:1203..13951681462823.1319063-CDS-Ecto-sp13_S_contig15514:1203..1395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15514 1204..1395 +
1681462823.1399019-CDS-Ecto-sp13_S_contig15514:2649..28141681462823.1399019-CDS-Ecto-sp13_S_contig15514:2649..2814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15514 2650..2814 +
1681462823.1477094-CDS-Ecto-sp13_S_contig15514:3240..36961681462823.1477094-CDS-Ecto-sp13_S_contig15514:3240..3696Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15514 3241..3696 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15514.4108.1prot_Ecto-sp13_S_contig15514.4108.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15514 1..3696 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15514.4108.1

>prot_Ecto-sp13_S_contig15514.4108.1 ID=prot_Ecto-sp13_S_contig15514.4108.1|Name=mRNA_Ecto-sp13_S_contig15514.4108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
ANVAITVVSAFFFGSAGLDEFVGGNESGRRLSTGGGGGVVGPTLVVLGIV
GLAWAFAWGVLHAVINYSERILKIAYLSLAGISGMAAISALATGYWFGCL
FPAFLCGWTVRFYLKRQSRIRFGSANLKVAGLAVKSMPWTVRAGLLMSGV
QVLWVLLSAMAAGGTIASLRTVAGPDGATYKASSCSDVMLDPPTRGMVHH
LSCTCGGHVVSYNSACEYEGHGFWLALFWLASLAWGADVIRNVVTATVTG
SVASWWYSADRDASPVRGALYRATHGSFG*
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mRNA from alignment at Ecto-sp13_S_contig15514:1..3696+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15514.4108.1 ID=mRNA_Ecto-sp13_S_contig15514.4108.1|Name=mRNA_Ecto-sp13_S_contig15514.4108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15514:1..3696+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCAACGTCGCCATCACCGTCGTGTCGGTGAGTAGAGAGGATGATCATGG
GGTGATGCTACGGGTAACGCCTCGTCCCCCTTGGCACACTTCTCATCTTT
TCCGAAAGCTTGTTGTTTGGCCAGCAACATGTATGCATCTAGAATCCTAC
ACACCCCTCTTGTAGCTAGGTTGCATTCGACCTTTTTTAGCAGGGATTTT
TGATCGGGGTCTGTGTTGAAAGGGTCCGTGGGATGGTGAACGATGAGAGG
GTCGAGAGAGAGAGAAAGAGAAGAGAAAGACGAACGGCCGCGGAGGTATA
GCGTGCTGCTTATAAAATGCCATAAACAGGCAAGCGCCGTGGCCGCTCGC
GACCGGACACTTGCCTTGTGGAAGTATTTCTCCGTCAGAAAAACACCGAC
GCTTCAAGTTCACTTTTTCTTGTTGTTTGTCAGACGGTCGTGAAGCGCGG
GTTGATGTTGGTGCAAACAAAGATACACAAGCGCACAAAAAGTCTTTCAA
CTTTGTCCGGGTCACGGCCGTGCCATGCACTGCTCGAACAGCGAAATGTT
TGGAACTCTTAACAGCAGAAGTCACTTTTTAATTGCACTACTGTACCAGG
TACAAAAAAAGTTCGTAGTTTTTGCCCCGAAGGGCCTGAAGGGACCTACT
GGAAGAGTAAATATTGGCGAGAGAGAAATAACATAGGGCGCTCAGTTGTT
CGAGAAGTCGCAACGGGCTTTTATGTCAGCCGGTGTTTGAAGATTTTCTA
CAGCTGATAATGTATGGTATTGGTGTGATCCCTGCCGTCCTTCTTTTTAG
GAAGGCAGTAGTAGAACAGCACGATAAGGAGTAGGGGAGCGCACGGCTAC
TAGCGTTGCATGCGGTCATTGTTAACACACGCAAATATTTCACGCTCGAG
GCTGGTAGGGCCATGCCACGACCACTCCCTGGCCGTGCTACGTACTTTAG
GAAAAGCCCCAGCTTCATAAAATTGATATCGAGATATCCCCCATCATCCT
ACAGTAGACCACGACACCCCCGCTCGCGTAGCACGCACATCACGACCCAA
CGTAACCTTTTTCTTGAGAACACCCCTTCCACGAAACACTATTGATTCCT
CTTACCACTACAAAAATCCCTAAATGCCAATCCGTTTTTCCCATGTTCCG
CGAGCAAAACACACGCCCTCGTCCCTCGTCCCCGCCTCTTCTGAACTTCC
TAGGCCTTTTTCTTCGGCAGCGCGGGGCTAGACGAGTTTGTCGGGGGAAA
CGAATCAGGCCGACGTTTGTCGACCGGCGGCGGGGGTGGCGTCGTCGGCC
CGACGCTGGTTGTCCTCGGGATTGTCGGCCTTGCCTGGGCGTTCGCGTGG
GGGGTGCTTCATGCCGTCATCAACTACTCAGAAAGAATCCTTAAGGTGGG
TGTATGTGTGGGTCCTTGTTGTTCTTGTTATTGTTGTTGTTGTTGTTGTT
GTTGTTCTTGTTCTTGTTCTTGTTCTTGTTGTTATTGTTACTGTTGTTCT
TGTTGTTCTTGTTGTTCTTGTTGTTGTCTTCACATTGACATCCGTTCCGA
TCACTCTACCCAGTACCTCCTTCTGTCCATACCAGTCAAACACTTGACGC
GGTCGTTTCCCATGGTCACAGACTAGCTTACCCAACAAAGGTATACTAAA
ATAGAATGCGTGTGCCTGTTTTTACTCCAAGCGTGGACCGCTCTGGCCGG
CTTGCCAATGACAAAGCAACTTGGCTCAGCGCGGCCAATATCGGTCAACG
TTTCTCAAGGCCATCTGGAACCTCGTGAGGGGGTGTCATCTGTGTGTTTG
TCTGCACAAAGAAAACGCGCGGGCAGCACCAACACTTTGACGGAAGACGG
GTGCGGTTTGGCATAGACTTTGCACAGCAGTGGAAATCTACTCTTGGAGC
AACTCGGCTGTTGTAGTGCAGGCATAAGCCGCCGACGCGTCTATTCCCAT
GGCCCGATTCTACTCTACTCTGATTGGAAAGGGGGCGAAAATAGCTTCAT
CGCCAGCATACAGGTTAAGGAGATTTCGAGAAAGGGTCAAGATAACCCAG
CTCCGTTTCCCTCTGTAAGACCTTGATGTTTTATCGATGCTACGACCCCC
ACCTCGAGACTTGAAGTATCACGTCAAACGCACAGACTTTGGACGCAATT
TCGAGACTTCCATTGAGTTGTGTAGACGCATTGTTTAGACGCGAGCTCCG
GCGTTAGCTAATTGTTTTGTCGATGGGGACGGAGCTCATGGAGAGCATCG
AAGTTGTCGGAAGTGGTGGCGGTGATGTGGAGTTCCTTGCCTGATGGTGC
GAATGCAAAATTTTCGACATGGTCCCCCAAGATAATGATGATACGGACCT
CCCCCCCCCGTCTTGCCAGTTTTTCGTTCGTTCCTCGACAGCAGCAGTTG
TTGTTGTTGTTGTTGTCTCGACATTGAAAGCTGTTTCAGTCTACTCTGAA
CTTTCTAGTATCCGTACTGGTCCGACGCAGACGCCTTCCCTGGTCACTAT
CCCCCACAACGGGTACACTTATTCTAGACGTAAAAAAAGCTGTTTCAAAA
TGGGCCCAGAGATGAAAATCCTTCAAACCAAGAAAGTATTGGTATGTTGA
TAGAATCCCAATCCTAGCGCTGCCTCTGTTCATTGATCGGGCCTTCCAGA
TAGCCTACTTAAGCCTTGCCGGGATCTCGGGCATGGCCGCCATCTCTGCT
CTCGCCACCGGTTACTGGTTCGGGTGCCTCTTCCCCGCCTTCCTGTGCGG
CTGGACCGTACGGTTTTACTTGAAGCGCCAGAGCCGGATCCGCTTCGGCT
CGGCTAACCTCAAGGTGAGCGTACCTACTGACATCCCTACCTCCCATGCC
TAGGTGCCAGAGCAAGGCCAACCGTAGACCTATCTCTGGGTGACAGAGCA
AGGTCGGCTCGCCTTTGACGTGTTCTCCGGATCGAGACGTGATCGAATGC
CCTGCACAGGTCGGACAACCTCAGGAGAGCCTTGACGGCAAGCTAGACTC
TTATGTGTCCGCTTGTTGACTTGGGGAGGTTTTCCAATCAACCGATCAAA
TCCATACGCGTTTATCCCGCGACCATGTAGCATAGCAACGGAACTATTTT
TATTTCGACTTTTTGGGCTAGCTGATCCAGCGGAGTGGTATGTATCAGTC
CCGCTTCATTGTGCACGCCACCCTACATAACGAAGCACTCCCTCTCCCCC
CCCACTCTCTCCACCCCTCCCTCCCGCCAACCACAACCAGGTCGCAGGCC
TAGCCGTCAAGTCCATGCCGTGGACTGTCCGAGCCGGCCTGCTGATGAGC
GGCGTTCAGGTGCTGTGGGTCCTCCTCTCCGCGATGGCGGCAGGGGGCAC
GATCGCCTCCCTCCGGACCGTAGCCGGCCCCGACGGCGCGACGTACAAGG
CGTCCTCCTGCAGCGACGTCATGCTCGACCCGCCCACGCGCGGCATGGTC
CACCACCTCTCGTGCACGTGTGGCGGGCACGTGGTCTCGTACAACTCGGC
CTGCGAGTACGAGGGCCACGGCTTCTGGCTCGCCTTGTTCTGGCTGGCCA
GCCTCGCGTGGGGCGCGGACGTTATCCGGAACGTGGTGACGGCGACGGTC
ACCGGCTCGGTAGCTTCCTGGTGGTACTCCGCCGACAGGGACGCGAGCCC
CGTGCGCGGCGCCCTCTACCGTGCGACACACGGCTCTTTTGGGTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15514:1..3696+

>mRNA_Ecto-sp13_S_contig15514.4108.1 ID=mRNA_Ecto-sp13_S_contig15514.4108.1|Name=mRNA_Ecto-sp13_S_contig15514.4108.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15514:1..3696+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCCAACGTCGCCATCACCGTCGTGTCGGCCTTTTTCTTCGGCAGCGCGGG
GCTAGACGAGTTTGTCGGGGGAAACGAATCAGGCCGACGTTTGTCGACCG
GCGGCGGGGGTGGCGTCGTCGGCCCGACGCTGGTTGTCCTCGGGATTGTC
GGCCTTGCCTGGGCGTTCGCGTGGGGGGTGCTTCATGCCGTCATCAACTA
CTCAGAAAGAATCCTTAAGATAGCCTACTTAAGCCTTGCCGGGATCTCGG
GCATGGCCGCCATCTCTGCTCTCGCCACCGGTTACTGGTTCGGGTGCCTC
TTCCCCGCCTTCCTGTGCGGCTGGACCGTACGGTTTTACTTGAAGCGCCA
GAGCCGGATCCGCTTCGGCTCGGCTAACCTCAAGGTCGCAGGCCTAGCCG
TCAAGTCCATGCCGTGGACTGTCCGAGCCGGCCTGCTGATGAGCGGCGTT
CAGGTGCTGTGGGTCCTCCTCTCCGCGATGGCGGCAGGGGGCACGATCGC
CTCCCTCCGGACCGTAGCCGGCCCCGACGGCGCGACGTACAAGGCGTCCT
CCTGCAGCGACGTCATGCTCGACCCGCCCACGCGCGGCATGGTCCACCAC
CTCTCGTGCACGTGTGGCGGGCACGTGGTCTCGTACAACTCGGCCTGCGA
GTACGAGGGCCACGGCTTCTGGCTCGCCTTGTTCTGGCTGGCCAGCCTCG
CGTGGGGCGCGGACGTTATCCGGAACGTGGTGACGGCGACGGTCACCGGC
TCGGTAGCTTCCTGGTGGTACTCCGCCGACAGGGACGCGAGCCCCGTGCG
CGGCGCCCTCTACCGTGCGACACACGGCTCTTTTGGGTAA
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