prot_Ecto-sp13_S_contig1548.4091.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1548.4091.1
Unique Nameprot_Ecto-sp13_S_contig1548.4091.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: D8LRB7_ECTSI (Similar to calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB7_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.500e-16
Identity = 43/70 (61.43%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   54 QNTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMDA 123
            +NTRAEF                       MVATGFGLTNQELKE FGFFD DGSGKVDM EFLDYMMDA
Sbjct:  134 KNTRAEFXXXXXXXXXXXXXXXXXXXXXXXMVATGFGLTNQELKEIFGFFDSDGSGKVDMAEFLDYMMDA 203          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A267FZ02_9PLAT (Uncharacterized protein (Fragment) n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FZ02_9PLAT)

HSP 1 Score: 59.7 bits (143), Expect = 6.770e-8
Identity = 38/126 (30.16%), Postives = 63/126 (50.00%), Query Frame = 0
Query:    1 GAPGTKRSCRPVSSTTTILLRAGRRHNPRALRR---SHYFRLSPAASPWVPNTCEQQ--NTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMM 121
            G  G+K   R       ++ + GR  + RALR+    H  R +          C Q+   TR E  DAF A+D N DG + + E  +++ + G  +T  E +E    +D++G GK+D  EF+D+++
Sbjct:   48 GRDGSKGRLRTFDEFAALVQQTGRNPSQRALRQYWDRHNSRRTGVDLQSFLEVCRQEPVTTRDELLDAFHAVDLNSDGYLSLDEFVQMLSSGGEPITKLEARELLQQYDKNGDGKLDYEEFIDFVL 173          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI001E1E08FC (calmodulin-2/4-like isoform X3 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E08FC)

HSP 1 Score: 53.9 bits (128), Expect = 2.530e-6
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 0
Query:   57 RAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMDA 123
            R E +DAFR  D    G+++ TEL R++   G  LT+++ KE     D++G GKV+M +F+D++ + 
Sbjct:   89 REELKDAFRIFDRTGKGEINKTELERVLKKYGEPLTHRQSKELIELMDKNGDGKVNMDDFVDFLCEV 155          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI000DC838C1 (Uncharacterized protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=UPI000DC838C1)

HSP 1 Score: 52.4 bits (124), Expect = 3.210e-6
Identity = 26/72 (36.11%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   51 CEQQNT-RAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMM 121
            C+ QN    E +  F  IDH+KDGK+ I++L+      G  L+ QEL+E     D++G   +D+ EF++ M+
Sbjct:   39 CDGQNPPHKELKKGFSMIDHDKDGKITISDLSAASKMAGIHLSRQELEEMMAEADQNGDHAIDISEFIEIML 110          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A7S2CDS1_9DINO (Calmodulin (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CDS1_9DINO)

HSP 1 Score: 53.9 bits (128), Expect = 4.090e-6
Identity = 28/84 (33.33%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   39 LSPAASPWVPNTCEQQNTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYMMD 122
            L PA  P  P       +  + +  F+ +D NKDG +   E+ RL+      ++++ELK  FG  DR+G+G+V+  EF+D++ D
Sbjct:   14 LRPALEPMPPADA----SIGKIKKKFKKLDGNKDGSLSFAEMKRLLQKGRDDISDRELKILFGQVDRNGNGRVEFSEFVDFVFD 93          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A7T798_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7T798_NEMVE)

HSP 1 Score: 52.4 bits (124), Expect = 6.820e-6
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   59 EFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYM 120
            EF++AF + D N DG++D  EL  +M + G    ++ELK      D+DGSG +D+ EF++ M
Sbjct:   16 EFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELM 77          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A6P4NLX4_GOSAR (probable calcium-binding protein CML45 n=9 Tax=Gossypium TaxID=3633 RepID=A0A6P4NLX4_GOSAR)

HSP 1 Score: 51.6 bits (122), Expect = 7.410e-6
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 0
Query:   59 EFEDAFRAIDHNKDGKVDITELNRLMVATGFG---LTNQELKEFFGFFDRDGSGKVDMVEFLDYM 120
            E ++AF   D NKDG +D TEL R+++  G     +T +E K      D DG G+VD  EFL +M
Sbjct:   54 EIKEAFDVFDDNKDGFIDATELQRVLICLGVKGKMVTVEECKRMIRVADEDGDGRVDFNEFLKFM 118          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: UPI00138FC30A (calmodulin n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FC30A)

HSP 1 Score: 52.4 bits (124), Expect = 7.580e-6
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   59 EFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYM 120
            EF++AF + D N DG++D  EL  +M + G    ++ELK      D+DGSG +D+ EF++ M
Sbjct:   28 EFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELM 89          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A0A1U8M7T1_GOSHI (probable calcium-binding protein CML45 n=14 Tax=Gossypium TaxID=3633 RepID=A0A1U8M7T1_GOSHI)

HSP 1 Score: 51.6 bits (122), Expect = 1.290e-5
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 0
Query:   59 EFEDAFRAIDHNKDGKVDITELNRLMVATGFG---LTNQELKEFFGFFDRDGSGKVDMVEFLDYM 120
            E ++AF   D NKDG +D TEL R+++  G     +T +E K      D DG G+VD  EFL +M
Sbjct:   86 EIKEAFDVFDDNKDGFIDATELQRVLICLGVRGKMVTVEECKRMIRVADEDGDGRVDFNEFLKFM 150          
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Match: A7SXI0_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SXI0_NEMVE)

HSP 1 Score: 52.4 bits (124), Expect = 1.950e-5
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   59 EFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFFGFFDRDGSGKVDMVEFLDYM 120
            EF++AF + D N DG++D  EL  +M + G    ++ELK      D+DGSG +D+ EF++ M
Sbjct:   16 EFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIELM 77          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1548.4091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LRB7_ECTSI1.500e-1661.43Similar to calmodulin 2 n=1 Tax=Ectocarpus silicul... [more]
A0A267FZ02_9PLAT6.770e-830.16Uncharacterized protein (Fragment) n=4 Tax=Macrost... [more]
UPI001E1E08FC2.530e-637.31calmodulin-2/4-like isoform X3 n=1 Tax=Mercenaria ... [more]
UPI000DC838C13.210e-636.11Uncharacterized protein n=1 Tax=Xenopus laevis Tax... [more]
A0A7S2CDS1_9DINO4.090e-633.33Calmodulin (Fragment) n=1 Tax=Alexandrium anderson... [more]
A7T798_NEMVE6.820e-640.32Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A6P4NLX4_GOSAR7.410e-641.54probable calcium-binding protein CML45 n=9 Tax=Gos... [more]
UPI00138FC30A7.580e-640.32calmodulin n=1 Tax=Nematostella vectensis TaxID=45... [more]
A0A1U8M7T1_GOSHI1.290e-541.54probable calcium-binding protein CML45 n=14 Tax=Go... [more]
A7SXI0_NEMVE1.950e-540.32Predicted protein n=2 Tax=Nematostella vectensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 95..123
e-value: 0.025
score: 23.8
coord: 59..87
e-value: 0.0089
score: 25.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 60..120
e-value: 1.4E-12
score: 47.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 91..123
score: 12.449
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 55..90
score: 13.174
NoneNo IPR availableGENE3D1.10.238.10coord: 30..123
e-value: 8.7E-19
score: 69.9
NoneNo IPR availablePANTHERPTHR23050:SF224CALMODULIN-LIKE PROTEIN 5coord: 53..121
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 53..121
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 104..116
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 68..80
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 53..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1548contigEcto-sp13_S_contig1548:16015..16386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1548.4091.1mRNA_Ecto-sp13_S_contig1548.4091.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1548 16015..16386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1548.4091.1 ID=prot_Ecto-sp13_S_contig1548.4091.1|Name=mRNA_Ecto-sp13_S_contig1548.4091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
GAPGTKRSCRPVSSTTTILLRAGRRHNPRALRRSHYFRLSPAASPWVPNT
CEQQNTRAEFEDAFRAIDHNKDGKVDITELNRLMVATGFGLTNQELKEFF
GFFDRDGSGKVDMVEFLDYMMDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair