prot_Ecto-sp13_S_contig15465.4084.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15465.4084.1
Unique Nameprot_Ecto-sp13_S_contig15465.4084.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15465.4084.1 vs. uniprot
Match: D8LQ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ27_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 5.300e-173
Identity = 270/286 (94.41%), Postives = 276/286 (96.50%), Query Frame = 0 
Query:   61 MMAAPTPGRESEGERTWIMAKRVASNWEKEDESSGNRLSAPEASQPSPAVPKTFVSTRLRHLRLSPDGTTLVVKSEQGGVDHELALDELLEVHETPSEESVTLMGTDIEIRIAFKGQAKALKQFRNMLVPTGTTGTTTPTQGDADRSTTVTTIKDPMGSSGGAAPPSPAEGVQAREAVAAGGPSPNEASLDGRNTAGSNYQQQHSLGGIDEGSTYAREAPSSRSAATTTPAGMGKMTSNVSTSVISPGSSVSGWGSVMGPGDGNLAADNATQRQLADITERAGAAQ 346
            MMAAPTPGRESEGERTWIMAKRVASNWEKEDESS NRLSAPEASQPSPAVPKTFVSTRLRHLRLSPDGTTLVVKSEQGGVDHELALDELLEVHETPSEESVTLMGTDIEIRIAFKGQAKALKQFRNMLVPTGTTGTTTP++ DADRSTTVTTIKDPMGSSGGAAPPSPAE +QAREA AAGGPS N A LDGRNTAGSNYQQQH LGGIDEGSTYAREAPSSRSAA TTPAGMGKMTS+V+ SVISPGSSVSGWGSVMGPGDGNLAA+NATQRQLADITERAGAAQ
Sbjct:    1 MMAAPTPGRESEGERTWIMAKRVASNWEKEDESSRNRLSAPEASQPSPAVPKTFVSTRLRHLRLSPDGTTLVVKSEQGGVDHELALDELLEVHETPSEESVTLMGTDIEIRIAFKGQAKALKQFRNMLVPTGTTGTTTPSEVDADRSTTVTTIKDPMGSSGGAAPPSPAEELQAREAAAAGGPSTNGAYLDGRNTAGSNYQQQHGLGGIDEGSTYAREAPSSRSAAATTPAGMGKMTSSVTNSVISPGSSVSGWGSVMGPGDGNLAAENATQRQLADITERAGAAQ 286
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15465.4084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ27_ECTSI5.300e-17394.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15465contigEcto-sp13_S_contig15465:709..3994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15465.4084.1mRNA_Ecto-sp13_S_contig15465.4084.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15465 709..3994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15465.4084.1 ID=prot_Ecto-sp13_S_contig15465.4084.1|Name=mRNA_Ecto-sp13_S_contig15465.4084.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
SGAGRVGAAKIVFTLSEMLGGTNAARLVRRSASVPDDEGDDDADPSGRAS
SVRSTPGSSEMMAAPTPGRESEGERTWIMAKRVASNWEKEDESSGNRLSA
PEASQPSPAVPKTFVSTRLRHLRLSPDGTTLVVKSEQGGVDHELALDELL
EVHETPSEESVTLMGTDIEIRIAFKGQAKALKQFRNMLVPTGTTGTTTPT
QGDADRSTTVTTIKDPMGSSGGAAPPSPAEGVQAREAVAAGGPSPNEASL
DGRNTAGSNYQQQHSLGGIDEGSTYAREAPSSRSAATTTPAGMGKMTSNV
STSVISPGSSVSGWGSVMGPGDGNLAADNATQRQLADITERAGAAQ
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