prot_Ecto-sp13_S_contig15438.4066.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15438.4066.1
Unique Nameprot_Ecto-sp13_S_contig15438.4066.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length669
Homology
BLAST of mRNA_Ecto-sp13_S_contig15438.4066.1 vs. uniprot
Match: A0A6H5JF13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF13_9PHAE)

HSP 1 Score: 818 bits (2114), Expect = 8.290e-290
Identity = 497/664 (74.85%), Postives = 508/664 (76.51%), Query Frame = 0
Query:    9 DGEHLVVCRGPLAHPRRLELRKVMLQRPGLSAPGEALWSLPLSLRARGDPYAENGYASSAEWGEGGYSSREDMEEEEGIEEMLHGSGMDGIGGEEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVFFGPGPSYLAAVNASAETPFVGAGFSYIVPGGGGAPVPSIAAHDVGGVDGAIGVGKERVYVIVLNAVDAIRVVEVRLHIEGAGQTSPPXXXXXXGGGKCPARVPVGGRRSSPLPFDTTFTIRPPEPLRASSKSRGGDAGGRAGXXXXXXXXXXSVGDGSSSSSADPLSLWWACGRDLPSIPLVGIHQVFPFRRRGRATSVPTAAAEQALAATARGVGQLWSRREVGGTAEPAAETPSGGSSISRPTEGYAEGEGVTRGSGSRVSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR--TLGRRRRAYASSDKSRQRVLDLEVFISQLLLRREAFPESKTPHASRSPXXXXXXXXXXXXXXXXXXXXXXXXG--VGGESAHAXXXXXGDTSRAEGADSNGGVGEGDADGFSGNTPSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGPRRKRKMGGGGGDGREEGRGAKXXXXXXXXXXXXXGGDAGAAVEGPFLVSYILDLDLE 668
            DGEHLVVCRGPL HPRRLELR+V LQRPGLSAPGEALWSLPLSLRARGD YAENGYASSAE G+GGYSS EDMEEE+G EEMLHG GMDGIG EEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVF  PGPSYLAAVNASAETPFVGA FSYIVPG GGAPVPSIAAHDVGGVDGA G G+ERVYVIVLNAVDAIRVVEVRLH EGAGQ SPP      GGGKCPARVPVGGRR SPLPFDTTFTIRPPEPL+ASSKSRG  AGGRA XXXXXXXXXX          AD LSLWWACGRDLPSIPLVG H+VFPFRRRG ATS+P A AE ALAATARG GQL SRRE G TAEPAAE PSGGSSISRPTEG A+          RVSSD                                                  XXXXXXXXX   +LGRRRRAYASSDKSRQRVLDLEVFISQLLLRREAFP+SKTPH SRSP    XXX                    VGGESA+A     GD SRAEGADSNGGVGEGDADGFS N PSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGPRRKRK GGG GDGREE  GAK XXXXX       GGDAGAAVEGPFLVSYILDLDLE
Sbjct:    6 DGEHLVVCRGPLEHPRRLELRRVRLQRPGLSAPGEALWSLPLSLRARGDHYAENGYASSAEGGQGGYSSGEDMEEEDGEEEMLHGPGMDGIGDEEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVFVAPGPSYLAAVNASAETPFVGAAFSYIVPGSGGAPVPSIAAHDVGGVDGAAGAGEERVYVIVLNAVDAIRVVEVRLHTEGAGQASPPSPSP--GGGKCPARVPVGGRRLSPLPFDTTFTIRPPEPLQASSKSRGDGAGGRAXXXXXXXXXXXXXXXXXXXXXADSLSLWWACGRDLPSIPLVGTHRVFPFRRRGPATSLPAATAEPALAATARGAGQLRSRREGGETAEPAAELPSGGSSISRPTEGDADXXXXXXXXXXRVSSDSGSSSSGSDRGLPAGRGGIGSGDRTEAERVAVAGVGGAEEGRHTAEPASAXXXXXXXXXXXXSLGRRRRAYASSDKSRQRVLDLEVFISQLLLRREAFPDSKTPHPSRSPPLPPXXXLESKPTEAKTVAAAAVTSGDVGGESAYAGGGSGGDASRAEGADSNGGVGEGDADGFSANAPSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGPRRKRKRGGGRGDGREERGGAKTXXXXXTGTRNGSGGDAGAAVEGPFLVSYILDLDLE 667          
BLAST of mRNA_Ecto-sp13_S_contig15438.4066.1 vs. uniprot
Match: D8LIF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF3_ECTSI)

HSP 1 Score: 699 bits (1805), Expect = 1.820e-244
Identity = 442/671 (65.87%), Postives = 458/671 (68.26%), Query Frame = 0
Query:    1 RVILGFTADGEHLVVCRGPLAHPRRLELRKVMLQRPGLSAPGEALWSLPLSLRARGDPYAENGYASSAEWGEGGYSSREDMEEEEGIEEMLHGSGMDGIGGEEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVFFGPGPSYLAAVNASAETPFVGAGFSYIVPGGGGAPVPSIAAHDVGGVDGAIGVGKERVYVIVLNAVDAIRVVEVRLHIEGAGQTSPPXXXXXX--GGGKCPARVPVGGRRSSPLPFDTTFTIRPPEPLRASSKSRGGDAGGRAGXXXXXXXXXXSVGDGSSSSSADPLSLWWACGRDLPSIPLVGIHQVFPFRRRGRATSVPTAAAEQALAATARGVGQLWSRREVGGTAEPAAETPSGGSSISRPTEGYAEGEGVTRGSGSRVSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLGRRRRAYASSDKSRQRVLDLEVFISQLLLRREAFPESKTPHASRSPXXXXXXXXXXXXXXXXXXXXXXXXGVGGESAHAXXXXXGDTSRAEGADSNGGVGEGDADGFSGNTPSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGPRRKRKMGGGGGDGREEGRG-AKXXXXXXXXXXXXXGGDAGAAVEGPFLVSYILDLDLE 668
            RVILGFTADGEHLVVCRGPLAHPRRLELR+V LQRPGLSAPGEALWSLPLSLRARGDPYAENGYASSAE GEGGYSS EDMEEE+G EEMLHGSGMDGIG EEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVF  PGPSYLAAVNASAETPFVGA FSYIVPG GGAPVPSIAAHDVG VDGA G G+ERVY+IVLNAVDAIRVVEVRLH EGAGQ SP XXXX    GGG+CPARVPVGGRRS PLPFDTTFTIRPPE L+ASSKSRG  AGGR  XXXXXXXXXX        SSADP+SLWW+CGRDLPS+PLVG H+VFPFRRRG ATSVP AAAE ALAATARG GQL SRR  G TAEPAAETPSGGSSISRPTEG AEGE +TR SG R ++                                                                                                  E+KT  A+                           GVGGESAHA XXXX      EGADSNGGVGEGDADGFS   PSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTG RR                  AK XXXX        GGDA AAVEGPFL+SYILDLDLE
Sbjct:   66 RVILGFTADGEHLVVCRGPLAHPRRLELRRVRLQRPGLSAPGEALWSLPLSLRARGDPYAENGYASSAEGGEGGYSSGEDMEEEDGEEEMLHGSGMDGIGDEEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVFVAPGPSYLAAVNASAETPFVGAAFSYIVPGSGGAPVPSIAAHDVGCVDGAAGAGEERVYMIVLNAVDAIRVVEVRLHTEGAGQASPXXXXXSISPGGGRCPARVPVGGRRSPPLPFDTTFTIRPPELLQASSKSRGDGAGGRXXXXXXXXXXXXXXXXXXXXSSADPMSLWWSCGRDLPSMPLVGTHRVFPFRRRGPATSVPAAAAEPALAATARGAGQLRSRRMGGETAEPAAETPSGGSSISRPTEGDAEGEELTRRSGGRTNTR-------------------------------------------------------------------------------------------------EAKTVAAAA----------------------VESGGVGGESAHAGXXXXXXXXXXEGADSNGGVGEGDADGFSARAPSVHATDYHCVTAGLRDGGRGVLLSLVVKVMYTGSRRXXXXXXXXXXXXXXXXXXAKTXXXXATGTRNGSGGDASAAVEGPFLLSYILDLDLE 617          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15438.4066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF13_9PHAE8.290e-29074.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF3_ECTSI1.820e-24465.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15438contigEcto-sp13_S_contig15438:57..3950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15438.4066.1mRNA_Ecto-sp13_S_contig15438.4066.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15438 57..3950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15438.4066.1 ID=prot_Ecto-sp13_S_contig15438.4066.1|Name=mRNA_Ecto-sp13_S_contig15438.4066.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=669bp
RVILGFTADGEHLVVCRGPLAHPRRLELRKVMLQRPGLSAPGEALWSLPL
SLRARGDPYAENGYASSAEWGEGGYSSREDMEEEEGIEEMLHGSGMDGIG
GEEPASVAVTESSDGFLVVAVVSRVEMQEDEDRVYHVFFGPGPSYLAAVN
ASAETPFVGAGFSYIVPGGGGAPVPSIAAHDVGGVDGAIGVGKERVYVIV
LNAVDAIRVVEVRLHIEGAGQTSPPPPSPSPGGGKCPARVPVGGRRSSPL
PFDTTFTIRPPEPLRASSKSRGGDAGGRAGGGGGDAGGSTSVGDGSSSSS
ADPLSLWWACGRDLPSIPLVGIHQVFPFRRRGRATSVPTAAAEQALAATA
RGVGQLWSRREVGGTAEPAAETPSGGSSISRPTEGYAEGEGVTRGSGSRV
SSDSSSSGSSGSDRDLSTGREGSGSGDRTQAERVTVAGVGRAEEGPHPAE
PAAAAAAAASADRTLGRRRRAYASSDKSRQRVLDLEVFISQLLLRREAFP
ESKTPHASRSPPPPPPSESKPTEAKTEAAAAATSGGVGGESAHAGGGSGG
DTSRAEGADSNGGVGEGDADGFSGNTPSVHATDYHCVTAGLRDGGRGVLL
SLVVKVMYTGPRRKRKMGGGGGDGREEGRGAKTGAGSATGTRNGSGGDAG
AAVEGPFLVSYILDLDLE*
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