prot_Ecto-sp13_S_contig15318.4001.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15318.4001.1
Unique Nameprot_Ecto-sp13_S_contig15318.4001.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A6H5JTW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 8.730e-40
Identity = 81/104 (77.88%), Postives = 83/104 (79.81%), Query Frame = 0 
Query:    1 MSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRDGGTGVDGGGSPSRXXXXXXXXXXXXXXSTCTRFDEFVMCEIFRAAEEQQQRRNS 104
            MSD+LPGDLLEEI RSASIDIVGGPVASSRTPSCV+AARD VGG KED  GGTGVDGG SPSR              STCTRFDEFVMCEIFRA EEQQQRRNS
Sbjct:  295 MSDILPGDLLEEIRRSASIDIVGGPVASSRTPSCVNAARDSVGGAKEDCGGGTGVDGGESPSRSVVAAATADAAA--STCTRFDEFVMCEIFRATEEQQQRRNS 396
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BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: D8LM85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM85_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.570e-36
Identity = 81/104 (77.88%), Postives = 86/104 (82.69%), Query Frame = 0 
Query:    1 MSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRDGGTGVDGGGSPSRXXXXXXXXXXXXXXSTCTRFDEFVMCEIFRAAEEQQQRRNS 104
            MSD+LPGDLLEEIH+SASIDIVGGPV SSRTP CVDAARD VGGG+ED DGG GVD G SPS        XXXXXX  TCTRFDEFVMCEIFRA EEQQ+R+NS
Sbjct:  297 MSDILPGDLLEEIHQSASIDIVGGPVTSSRTPLCVDAARDSVGGGEEDCDGGKGVDAGKSPS--GSVIAAXXXXXXAGTCTRFDEFVMCEIFRATEEQQRRQNS 398
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTW0_9PHAE8.730e-4077.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM85_ECTSI1.570e-3677.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15318contigEcto-sp13_S_contig15318:2845..3159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15318.4001.1mRNA_Ecto-sp13_S_contig15318.4001.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15318 543..3159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15318.4001.1 ID=prot_Ecto-sp13_S_contig15318.4001.1|Name=mRNA_Ecto-sp13_S_contig15318.4001.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRD
GGTGVDGGGSPSRSVVAAAAAAAAAAASTCTRFDEFVMCEIFRAAEEQQQ
RRNS*
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