mRNA_Ecto-sp13_S_contig15255.3954.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15255.3954.1
Unique NamemRNA_Ecto-sp13_S_contig15255.3954.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A6H5L5E0_9PHAE (Sacchrp_dh_NADP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5E0_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 5.070e-184
Identity = 273/294 (92.86%), Postives = 279/294 (94.90%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYT----MTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
            TDYIDLCGEPEFMQRMTL FHEAAEAKG+LIMHACAFDSVPADLGCLFAAKQF+SP+VCSSVSSF+T NVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP+YSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLF+HEGPTEEQMNEASYT    MTFLAKGYSTPPT AEP ATSAAG DPG VEA XXXXXX   A EPDVTVVTRVKGPEPG
Sbjct:  114 TDYIDLCGEPEFMQRMTLMFHEAAEAKGVLIMHACAFDSVPADLGCLFAAKQFVSPAVCSSVSSFVTFNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPYYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFSHEGPTEEQMNEASYTTSFEMTFLAKGYSTPPTTAEPSATSAAGVDPGVVEAXXXXXXXXXXAGEPDVTVVTRVKGPEPG 407          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: I2CP78_NANGC (Putative saccharopine dehydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP78_NANGC)

HSP 1 Score: 232 bits (592), Expect = 1.020e-69
Identity = 134/295 (45.42%), Postives = 181/295 (61.36%), Query Frame = 1
Query:    1 RTDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSP--SVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSL--AGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
            RTDYIDLCGEPEFM R+ L +HE A  K +L++ ACAFDSVPADLG +   K F++   +  +SV SF+ ++ G  G  GHATTFEAAVHGFGS +DL K+R+E++ K P      VG     +GGP++E+   +  Y FKFPG+D++VV++TQ SL  +G    A L P Y+AYFT   LW A  +++ GG+F  LA+  WGR+LLL +   F+ G FT EGP++E++    + MTF+A GYS      EP A S+     G                  D  +VTR+ GPEPG
Sbjct:  139 RTDYIDLCGEPEFMDRILLLYHEEAREKQVLLLSACAFDSVPADLGVIMTRKTFLARGGNALASVESFLNIDTGGKGLHGHATTFEAAVHGFGSISDLAKLRRELKRKMPYDDTRTVGPPLKAKGGPYFEKR--LSRYAFKFPGSDASVVKATQRSLVLSGLVPSAALLPRYAAYFTVPSLWWAGVVSVVGGIFGFLAQRPWGRSLLLAHPALFTLGAFTPEGPSDEELAATHFQMTFIASGYSN----TEPGADSSPLLRKGPC----------------DKVLVTRITGPEPG 411          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A9UV00_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UV00_MONBE)

HSP 1 Score: 197 bits (502), Expect = 2.340e-57
Identity = 110/241 (45.64%), Postives = 154/241 (63.90%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTP 726
            T+Y+D+ GEPEF++R+ ++++E A+AKGI I+ AC FDS+PADLG LF   QF   S  +SV S++ L+ G  G + H  T+E+AVHGFGSA +LR +RK    + P   +P VG R  +   P ++Q   + AY   FPG+D+++VR +Q  LA + E       YSA+FT  QL   +     G VF  LA   WGR+ LL     FS G+F+HEGPTEEQM E +++MTF A+GYS+P
Sbjct:  102 TNYLDISGEPEFIERIEVEYNEQAKAKGITIISACGFDSIPADLGTLFTVSQFPEGSRPASVESYLQLHAGEKGCAVHYATYESAVHGFGSAEELRALRK----RMPKVNVPVVGPRGPKSSLPRFDQR--VNAYALPFPGSDASIVRRSQRYLA-QTESPVSPVQYSAFFTISQLLWTSIFVACGTVFGLLASFEWGRSFLLKYPKVFSMGVFSHEGPTEEQMAETAFSMTFFAQGYSSP 335          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A0D2X0Q6_CAPO3 (Saccharopine dehydrogenase, variant n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0Q6_CAPO3)

HSP 1 Score: 197 bits (501), Expect = 1.000e-56
Identity = 109/291 (37.46%), Postives = 165/291 (56.70%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP-HYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
            TD++D+ GEP++++ + LK+H+ AE KG+++++ C FDS+PADLG  FA +QF +P + S++ S+++++ GP G  GH  T+E+AVHGFG+  +L ++R++  A    +++P V      R G F+ +    + +C  F GAD++VVR TQ       E  G+ P  Y AYFT    W       FG +FQ  A+  +GR +LL +   F+ GLF+HEGPT  Q+N  S++MTF A GYS+                             A     PD  +VTRV GPEPG
Sbjct:  112 TDFLDVSGEPQYLETIALKYHKQAEEKGVIVVNTCGFDSIPADLGTAFAVQQFGTPELVSNIESYLSIHSGPEGMGGHYATYESAVHGFGARGELDQLRRQAGAS---ARLPIVAPPIKRRAGAFFHKE--SDRWCMPFMGADASVVRRTQRVNY---EARGVSPIQYGAYFTISSFWTLILFFFFGSIFQLFARYPFGRKILLKHPKLFTFGLFSHEGPTRRQLNTTSFSMTFYALGYSS---------------------------KDAVETKRPDKKIVTRVAGPEPG 367          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A7S0LIR9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIR9_9EUKA)

HSP 1 Score: 196 bits (498), Expect = 3.540e-56
Identity = 109/258 (42.25%), Postives = 154/258 (59.69%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLN--VGPSGYSGHATTFEAAVHGFGSAADLRKVRKEV------QAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRG---EGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEP 744
            TD IDLCGEPE++ R+ L    AA   G+++ HACAFDSVPAD+G LFAA QF SP+ C+  + + T +   G +G + + TTF AAVHGFG+    R+ R+++      QA      +P +G +   RGGPF+ +   ++ +CF FPGADSAVVR++Q +L  R    +   L P +  YF     +   ++  FGG+F  LA   WGR LLL N   F+ G F+ EGPT+E ++  S+T  F A GYS+   A+ P
Sbjct:   93 TDVIDLCGEPEYIDRIMLHHAGAARKAGVIVAHACAFDSVPADVGTLFAALQFKSPAKCAHATMYHTFSPPAGVAGANANVTTFNAAVHGFGAVGPTREQRRQLMRQLEEQAPGSSKGVPPIGPKLKPRGGPFWNER--LQKWCFLFPGADSAVVRASQRTLVARAPAEQATRLGPQFGGYFCVSSTFSMLRVAFFGGLFNFLATKAWGRRLLLANPQFFTCGAFSSEGPTQEMLDGTSFTTVFEAAGYSSYDAASPP 348          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A2V0NY87_9CHLO (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NY87_9CHLO)

HSP 1 Score: 195 bits (495), Expect = 1.010e-55
Identity = 117/247 (47.37%), Postives = 153/247 (61.94%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPR-VGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAE 741
            TDY+DLCGEPEF++RM L + + A A G L+  A AFDS+P DLG +  A++F  P+V SSV S I ++  P G   H  T+E+AVHG GSA  L++VR E + K    K P+ VG RP    GP ++   G  AY   FPGAD++VVR TQ +L  RGE A    H+SA F     + A    + G    TLAK GWGR LLL N G  S GL +H GPT+EQM  A+  +TF+A+G+S PP +A+
Sbjct:  111 TDYLDLCGEPEFIERMELAYAQPAAASGALMACASAFDSIPNDLGTILVAREFRPPAVPSSVESVIRVSA-PLGLPIHFATWESAVHGIGSAQHLQRVRAEAK-KAGRGKAPKLVGPRPRGAQGPVWDAALG--AYTLPFPGADASVVRRTQMALGARGEPA---VHFSARFAVATRYYAAVAVVVGATLMTLAKHGWGRALLLRNPGLMSYGLVSHAGPTQEQMEAATTEVTFVARGFSAPPESAD 350          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A836CN77_9STRA (Saccharopine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN77_9STRA)

HSP 1 Score: 192 bits (489), Expect = 6.460e-55
Identity = 109/246 (44.31%), Postives = 139/246 (56.50%), Query Frame = 1
Query:   10 YIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPS---VCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAA 738
            YIDLCGEPEF+ RM LKFH  AE K +L++H+CAFDSVPADLG L+AA+QF + +   VCSSV SF+TL+ GP+G  GHATT+E+AVHGFG+  DLR++RKE+ AKFPP +                                                          AYFT      A    LFGG F  L+ S WGR+LLL     F++G+FTHEGP+ +Q+ E S+TM  +A+GYS    AA
Sbjct:   89 YIDLCGEPEFITRMKLKFHAKAEEKRVLVLHSCAFDSVPADLGVLYAAQQFTARTPGGVCSSVESFLTLHTGPAGLGGHATTYESAVHGFGAVEDLRRLRKELAAKFPPPQ----------------------------------------------------------AYFTVPSAAAAGLFVLFGGTFSLLSGSAWGRSLLLKYPALFTKGVFTHEGPSPQQLAETSFTMKLIARGYSAAAAAA 276          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A0G4EWP5_VITBC (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWP5_VITBC)

HSP 1 Score: 191 bits (486), Expect = 1.630e-54
Identity = 108/244 (44.26%), Postives = 152/244 (62.30%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQT-PGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPT 732
            T Y+D+CGEPEF++RM LK+H+ A   G LI+ +C FDSVPAD+G   A +QF SP+V   V +F+ L +G +G S H TT++ AV GFGSAADL  +RKE+    P  K+ ++GA+P    GPF ++  PG+    F FPGAD++V++ +Q S     + + +  H + Y           M LFGG+F  LAK   GR LLL   G F+ G+FTH GPT+EQ+ +  + MT  A G+S+ PT
Sbjct:  106 THYLDICGEPEFLERMELKYHQQALGNGCLIVGSCGFDSVPADIGSQVAREQFKSPAVPYKVETFLQLTMGEAGGSIHYTTYQCAVEGFGSAADLSNIRKELAPSKP--KVTKLGAKPKLEKGPFSDKRMPGMSG--FLFPGADASVIKRSQESFTAA-DPSYVSFHPACYILLPDGKAKYLMMLFGGMFSFLAKYSLGRQLLLAAPGIFTYGMFTHSGPTKEQVAQGGFEMTIFASGFSSTPT 344          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: A0A7S4C0M5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0M5_CHRCT)

HSP 1 Score: 191 bits (485), Expect = 4.540e-54
Identity = 112/271 (41.33%), Postives = 155/271 (57.20%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNV--GPSGYSGHATTFEAAVHGFGSAADLRKVRKEV----QAKFPPSK--IPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGA----------------------GLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTP 726
            TDY+DLCGEPEF++RM L++ +AA   G+ ++HACAFDSVPAD+G +F A QF  PS C+ V+ + T+ V  G SG   HATTFEAAVHGF    + R+ RK++    +A+ P S    P +G R   R GPF+   P ++ + F FPGAD+AVVR+TQ +LA  G  A                       L P ++AY           M +FG +F  LA+  WGR LLL +   FS G F+ +GP+++ ++  S+   F   GYS P
Sbjct:   91 TDYVDLCGEPEFIERMALRYGDAARDAGVRVVHACAFDSVPADIGAIFTAMQFTPPSRCAHVNMYHTVKVAEGASGAYAHATTFEAAVHGFAGVGEAREQRKQLLDRMEARAPGSSKGAPPIGPRLRARPGPFFH--PRLQKWAFLFPGADAAVVRATQRALAASGANAVSDAAPGDATAAPPNTASGGAAQLSPQFAAYVCVNTTSAMVVMAIFGTLFNFLARRDWGRKLLLAHPKLFSWGAFSRKGPSKQMLDGTSFCSWFEGCGYSNP 359          
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Match: F2U775_SALR5 (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U775_SALR5)

HSP 1 Score: 188 bits (477), Expect = 2.780e-53
Identity = 124/291 (42.61%), Postives = 164/291 (56.36%), Query Frame = 1
Query:    4 TDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFAAKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVRKEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRSTQNSLAGRGEGAGLCP-HYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGRNLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPATSAAGADPGEVEAAXXXXXXAPPAVEPDVTVVTRVKGPEPG 873
            T Y+D+CGEPEF++RM   + E A   G  I+ AC FDS+PADLG +F  KQF +  + SSV SF+ +  G +G   H  TFE+AVHGF SA +LR +R++ + K     +P VG R ++R G   E       YC  FPG+D+++VR +Q  L  +  GA + P  Y+A+F+    +    M   G VF  LA   +GR+LLL     F+ G+FTH+GPTEEQM   S+ M F+AKGY           TSAA A   E   A            PDVTV TRV GPEPG
Sbjct:  108 THYLDICGEPEFIERMEYLYDEQARQTGATIISACGFDSIPADLGTMFTVKQFTNGQIPSSVESFLQIKSGEAGTKVHFATFESAVHGFASAGELRDLRRK-KGKVT---VPVVG-RKLKRPGMLPEWREDGHGYCIPFPGSDASIVRRSQQYL--QAHGAEVQPVQYAAWFSLPSGFWTGVMMAAGTVFGALANFSFGRSLLLKFPELFTLGVFTHDGPTEEQMRATSFEMNFVAKGY-----------TSAAAA---EARGA------------PDVTVKTRVSGPEPG 365          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15255.3954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5E0_9PHAE5.070e-18492.86Sacchrp_dh_NADP domain-containing protein n=2 Tax=... [more]
I2CP78_NANGC1.020e-6945.42Putative saccharopine dehydrogenase (Fragment) n=1... [more]
A9UV00_MONBE2.340e-5745.64Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A0D2X0Q6_CAPO31.000e-5637.46Saccharopine dehydrogenase, variant n=2 Tax=Capsas... [more]
A0A7S0LIR9_9EUKA3.540e-5642.25Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A2V0NY87_9CHLO1.010e-5547.37Sacchrp_dh_NADP domain-containing protein n=1 Tax=... [more]
A0A836CN77_9STRA6.460e-5544.31Saccharopine dehydrogenase n=1 Tax=Tribonema minus... [more]
A0A0G4EWP5_VITBC1.630e-5444.26Sacchrp_dh_NADP domain-containing protein n=1 Tax=... [more]
A0A7S4C0M5_CHRCT4.540e-5441.33Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
F2U775_SALR52.780e-5342.61Sacchrp_dh_NADP domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15255contigEcto-sp13_S_contig15255:11..4149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score550.4
Seed ortholog evalue4.9e-154
Seed eggNOG ortholog2880.D7G3A3
Preferred nameSCCPDH
Model size873
Hectar predicted targeting categoryother localisation
GOsGO:0002576,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005811,GO:0005886,GO:0006810,GO:0006887,GO:0007275,GO:0007423,GO:0007444,GO:0008150,GO:0009507,GO:0009526,GO:0009536,GO:0009888,GO:0009941,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0022416,GO:0030141,GO:0030496,GO:0031090,GO:0031091,GO:0031093,GO:0031410,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0034774,GO:0035220,GO:0035295,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044433,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0046903,GO:0048513,GO:0048731,GO:0048856,GO:0051179,GO:0051234,GO:0060205,GO:0060429,GO:0070013,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503
Exons7
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG3268@1,KOG2733@2759
Ec32 ortholog descriptionSaccharopine dehydrogenase
Ec32 orthologEc-07_005660.2
Cds size873
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15255.3954.1prot_Ecto-sp13_S_contig15255.3954.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15255 11..4149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462811.3554997-CDS-Ecto-sp13_S_contig15255:10..1251681462811.3554997-CDS-Ecto-sp13_S_contig15255:10..125Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 11..125 +
1681462811.3658884-CDS-Ecto-sp13_S_contig15255:1076..11851681462811.3658884-CDS-Ecto-sp13_S_contig15255:1076..1185Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 1077..1185 +
1681462811.3745909-CDS-Ecto-sp13_S_contig15255:1548..16571681462811.3745909-CDS-Ecto-sp13_S_contig15255:1548..1657Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 1549..1657 +
1681462811.3864853-CDS-Ecto-sp13_S_contig15255:2028..21751681462811.3864853-CDS-Ecto-sp13_S_contig15255:2028..2175Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 2029..2175 +
1681462811.3967345-CDS-Ecto-sp13_S_contig15255:2436..25401681462811.3967345-CDS-Ecto-sp13_S_contig15255:2436..2540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 2437..2540 +
1681462811.4051976-CDS-Ecto-sp13_S_contig15255:3292..34011681462811.4051976-CDS-Ecto-sp13_S_contig15255:3292..3401Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 3293..3401 +
1681462811.4132652-CDS-Ecto-sp13_S_contig15255:3969..41491681462811.4132652-CDS-Ecto-sp13_S_contig15255:3969..4149Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15255 3970..4149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15255.3954.1

>prot_Ecto-sp13_S_contig15255.3954.1 ID=prot_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
RTDYIDLCGEPEFMQRMTLKFHEAAEAKGILIMHACAFDSVPADLGCLFA
AKQFMSPSVCSSVSSFITLNVGPSGYSGHATTFEAAVHGFGSAADLRKVR
KEVQAKFPPSKIPRVGARPVERGGPFYEQTPGIEAYCFKFPGADSAVVRS
TQNSLAGRGEGAGLCPHYSAYFTAGQLWGATQMTLFGGVFQTLAKSGWGR
NLLLNNVGAFSRGLFTHEGPTEEQMNEASYTMTFLAKGYSTPPTAAEPPA
TSAAGADPGEVEAAAAAAAPAPPAVEPDVTVVTRVKGPEPG
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mRNA from alignment at Ecto-sp13_S_contig15255:11..4149+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15255.3954.1 ID=mRNA_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4139bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15255:11..4149+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGACGGACTACATCGACCTGTGCGGAGAGCCGGAGTTCATGCAGCGGAT GACCCTCAAGTTCCACGAGGCGGCCGAGGCCAAGGGTATTCTCATCATGC ACGCCTGCGCGTTCGGTAAGGGCTAGAGGAGTATAGTGTGTGCGTGTGGG TATAAATGTGTCTTTTGTTTTTTGCACCGACCGCGCTACCTGGCTGACCA ATTAAAAGACGCCATCCTCACCGCGGTTGAAAACACAAAAATGCGTCTGA AGTTCACCATCCGGGACCCTGTGGCGGAGCGTCATGCGAAATTCTGTGTT ACTCTCCGGATTAAAGACCGATACGGTGGCAAAAAACAGACAAAAAAAGT ATGTGTGTTTGCCCCGAGATGGTCACGCAGCAGTGCGAAACGGCATGCAC GGCTGCTGTGGCTTCCTTTGCACGTGCTGCCAACCGCTCGCCGACCGGCT GACCAAGTGCAAAATCCGTACGCTCAGCGAGACTTGATTGATAACGCTGT CCAGTGTGAGATCACCCCCGACAGGCGTGTTCGTGTTTATGTGTCTTGAG TTTTTTGTATCGGATGGAGACCGCGCTAACTGGCTGACCAATGAAAAGAC GTCAGCCTCACTGCGGCAACGACCTGCCAAACGCTGATTCCAGAAGGCCA TGATGTGGGATTGCGGGAGGAGGTTCTCGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGGTGTGCGTTTTTTCTTTGTTAGCATCGACAACGCTCTCA CCGACTGGCCAATGCAGAGACGTCATTATTGTGGCGGGACAAAAAACACG AACACGCTTTCTCTTCTACGGACAGGGGGGCGGGGCGCAGGAGTTGGACG GCAGCAGTGTCTTGCTTCTGAAGTGCAAGGAGAAAGCTCAATCGTTTTAG GCACCATTGTTGCTCCGGGTGTGTGTGTTTGCTGGCATCGACTGCGCTGA CTTGCCGACCAACGAAGATATGACGGTCTCGACAGTGGGCCCACGAAATC GTTCACCTCGGTTCCGCTTGCTCACGTTTAGTGTGCCTGCTGCATCTCGC GCGCTTCGCCGTGCAGATTCCGTCCCCGCGGACCTCGGGTGCCTGTTCGC CGCGAAGCAGTTCATGAGCCCTTCCGTGTGCTCGTCTGTGTCCTCTTTCA TCACCCTCAATGTCGGGCCGTCTGGGTAAGGAAGAGAGGCCTTTGGCAGC CTTGTCTTTTCTTGTTCTGGTAATCAAATGCAAACGTCTGTCGGCAGCAG CTACAACAGCTGCTTTGGGGCTTGCGACGGCGGCGGCATAATCGCTACGG CCTCTTCTCGTGTATGCAGGCTCTGATCGCTGAACATGTGCCGATTCGCG GGTGCCGGTTCGCGGGCGTTAAACGTACCGGTATCTAAATTTTTACAATC ATTCAACCGCAGTCATGTGGATGTGTTGAAATATTGTTGCAGTGAGTAGG GAAAGACACCTGTTGGATGCTGGGCTTCAGTTTTTGGTCTGGTTAAGGCC CGCACCCTGGATTGTTGTGTTTTATGTTTTGTGAACAGGTACTCCGGCCA CGCCACGACATTCGAGGCGGCCGTGCACGGGTTCGGTTCCGCCGCAGATC TAAGGAAGGTTCGGAAGGAGGTGCAGGCCAAGTTTCCTCCCTCGAAGGTG AGAATGGGAGGACCTTCAAGCCCCAACCCTGAGAGCTGTGTTGTGCGTGT GTTGGTTGGTTGGTTGTTTTCATCGTAGCTGTTGTCGTTGTCTTGCATAG TTACAGCGTTTGTGTCTGCCACACCGTCCCAGCAGAACAAGCAGCAGCGA TGGCCAAGACGCGTGACTCCGCGTCGCGTTGTTGTCCTGCCCCCCCCTGG AGATTCTGCGCGTGTGCTTTTTACACCGCCCCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCAGTGATGACCTTTGTGA TTTTGCCTTGTGAAAAATCGCGTTTGTATGTTCTCCACATCATGTTGTTG TCTTGCCTTTGCCGGCAGATTCCGCGTGTGGGTGCCCGTCCGGTGGAGAG AGGTGGCCCCTTCTACGAGCAGACGCCGGGGATAGAGGCGTACTGCTTCA AGTTCCCGGGGGCAGACTCGGCGGTTGTGAGGTCCACGCAGAACTCCCTG GCCGGCAGAGGGGAGGTGAGGTCGCTGCTTCGGCTGTGATCACGCCGTAG GCTTAGGACCCGCGAGGTCTTACTCTGGTTACCGGGCCACCAGTTCGCTA GAAGATGAGACCCCTTTACTTTTTGTTTGCACGGTGTTTGTGCATGGAAA ATCGTTTTGTTTTCCCCTATGAGCAACCTTGTCTTTGGTTCTATCCGTGT TGCTGTTGCTGTTGCTGCTACCTCTGCGGCGGTGATGATGATGGGTTCTT GGCTCGTCCGGGCGCTTGGTGACCAGGGGGCCGGACTGTGCCCGCACTAC TCAGCATACTTCACGGCCGGCCAGTTGTGGGGGGCCACGCAGATGACACT CTTCGGAGGGGTGTTTCAGACGCTCGCAAAGTGAGAGAGCGAGACAGCAG TGAGAGAGACATGAGGTTCTGTGGGGGCCCCTTTGCGGCGGTAGTGGCGC GAGCACCGTTAGCAGCAAGAGACGAAACACCTGCGTGCGGATGATTTACG GCTCGGTGTCCGACTAGTCTAATAACCATTGAAAAATCTGTCGGTGGTTG AGATTTACATAGTTTTGTTGAAAACATTTTTTTCACAAAAACGAAAGAAA TTCTTCTTCAATCCGCAGATGAAAAAAAAAGCCTACGGGAAAATCGTAAT TCATTATCCTGTTGTTAGTCGCTTTTTAGACAGAGCAGGCCGGCCCTCTT CACACCAAACCGTGCATTCTTTTGAAATTCAGGCTGCCAAGGTTTGGGAA TATGTAGGTGTGTTACAGCTTGGAGTCTTACAGCATCGCGTGGTGCGTTT GTGCCGCCGTTGTAACCCTGTCGAGCAAGAGGGCCGCTGCACCCTCTGCC CCGACATATAGGGACTCGGGCCTTTCCTGGTTTATCTTGTCGGAAGGTAT GGCCCGTGGACGAGGGTTCAGTTGTTTTGTTCCACGTCGTAGAGGCAGTC TAAATATTTCCTCTTTTTTCACCAATATTTTTTTATCTTCCGATTCACTT TGTTGTTACTTCATCGATTTGCTACTCACATGTCAGTTTTTGACGGCATC GTGCTTTGCCCTACACCTGCTGCCCGTGTCGTTGTCGTTGTCGTTGTCGT TGTTGTTGTTCATGTTGGTTTTTTATCTGCAGGAGCGGGTGGGGTAGGAA CCTGCTCCTGAACAACGTCGGGGCGTTCAGTAGGGGACTCTTCACGCACG AGGGACCCACCGAAGAGCAGATGAACGAGGCGAGTTACACAGTCAGTTGA GAGACTGGACCGAAGGCTGTCTTGGTGGTTTGGTGGTCTTGTCTCTTCGC CTCGAGAGGCGAACGATACTATTTATACAGCTGTATACGTGCGATAACTG GTACTTACCCCCCCTGGGTGGGGCATTCGTTTGTGTTATTCGAAGAACGG GGAAATAACACTGAGGGTATATCTGACCGTGTTGCTCGCTATATCAGGGT GCATGAGCGAAAAGCCCCCATCCCCGTCCGAGCCCATCCTGTCCCGGTAG GATTCGATTGTGCCGTTCCGTGTGGATGGAAGGCCTCGGCCGATTGCGGC ACATGGCACTTTCAAAAGATCCAACAAGGTCTGGCCGAACGAACTTTGCC ATTGTTTTGCCGCATAGAAGGGAAACGGTCGCCCCCTCGTAGTTTTTTTT GGTTGACGCTAGAAGTAAACCAATCAGAGAACAACGGGCGCCCTATTGAT CGCCCTCTTATCCGTGTCGACTTGATGAAACGAATCCGGTTCTTCCTGTA AATGTTGGGGTCGCGTTGCGTTTACTGCTGCTGCTTGTGTTCGGCAGACG TCCTTCGAGATGACCTTCTTGGCCAAGGGGTATTCGACGCCCCCAACTGC TGCGGAGCCCCCCGCCACGTCCGCCGCCGGCGCCGACCCCGGCGAGGTAG AAGCTGCCGCAGCGGCGGCGGCCCCAGCGCCGCCCGCGGTAGAACCAGAC GTGACCGTGGTTACCAGGGTGAAGGGTCCAGAACCAGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15255:11..4149+

>mRNA_Ecto-sp13_S_contig15255.3954.1 ID=mRNA_Ecto-sp13_S_contig15255.3954.1|Name=mRNA_Ecto-sp13_S_contig15255.3954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15255:11..4149+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGACGGACTACATCGACCTGTGCGGAGAGCCGGAGTTCATGCAGCGGAT
GACCCTCAAGTTCCACGAGGCGGCCGAGGCCAAGGGTATTCTCATCATGC
ACGCCTGCGCGTTCGATTCCGTCCCCGCGGACCTCGGGTGCCTGTTCGCC
GCGAAGCAGTTCATGAGCCCTTCCGTGTGCTCGTCTGTGTCCTCTTTCAT
CACCCTCAATGTCGGGCCGTCTGGGTACTCCGGCCACGCCACGACATTCG
AGGCGGCCGTGCACGGGTTCGGTTCCGCCGCAGATCTAAGGAAGGTTCGG
AAGGAGGTGCAGGCCAAGTTTCCTCCCTCGAAGATTCCGCGTGTGGGTGC
CCGTCCGGTGGAGAGAGGTGGCCCCTTCTACGAGCAGACGCCGGGGATAG
AGGCGTACTGCTTCAAGTTCCCGGGGGCAGACTCGGCGGTTGTGAGGTCC
ACGCAGAACTCCCTGGCCGGCAGAGGGGAGGGGGCCGGACTGTGCCCGCA
CTACTCAGCATACTTCACGGCCGGCCAGTTGTGGGGGGCCACGCAGATGA
CACTCTTCGGAGGGGTGTTTCAGACGCTCGCAAAGAGCGGGTGGGGTAGG
AACCTGCTCCTGAACAACGTCGGGGCGTTCAGTAGGGGACTCTTCACGCA
CGAGGGACCCACCGAAGAGCAGATGAACGAGGCGAGTTACACAATGACCT
TCTTGGCCAAGGGGTATTCGACGCCCCCAACTGCTGCGGAGCCCCCCGCC
ACGTCCGCCGCCGGCGCCGACCCCGGCGAGGTAGAAGCTGCCGCAGCGGC
GGCGGCCCCAGCGCCGCCCGCGGTAGAACCAGACGTGACCGTGGTTACCA
GGGTGAAGGGTCCAGAACCAGGT
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