prot_Ecto-sp13_S_contig15145.3880.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15145.3880.1
Unique Nameprot_Ecto-sp13_S_contig15145.3880.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15145.3880.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.430e-88
Identity = 299/316 (94.62%), Postives = 303/316 (95.89%), Query Frame = 0 
Query:    1 YAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRPMWCPDHRPPGSFDVKTSRCQEPSCLKHPRHDNRSTRAYRQIALARVQCYGYDRDRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYTRCMST 316
            Y EPGQKKPKYCFLHKKPG IDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGRPMWCPDHRPPGSFDVKTSRCQEPSCLKHPRHD RST+A+RQI  ARVQ      DRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPY RC++T
Sbjct:   16 YGEPGQKKPKYCFLHKKPGQIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRPMWCPDHRPPGSFDVKTSRCQEPSCLKHPRHDTRSTKAHRQIVSARVQW-----DRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYRRCLNT 326
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BLAST of mRNA_Ecto-sp13_S_contig15145.3880.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 3.720e-40
Identity = 247/313 (78.91%), Postives = 247/313 (78.91%), Query Frame = 0 
Query:    1 YAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRPMWCPDHRPPGSFDVKTSRCQEPSCLKHPRHDNRSTRAYRQIALARVQCYGYDRDRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYTRC 313
            YAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGRPMWCPD                                            GYDRDRIRRRCRLHKLDDMV                 CGFPGLKPRFCSEHKQDGMLNLK    RC
Sbjct:   16 YAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAGQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGRPMWCPDXXXXXXXXXXXXXXXX-------------------XXXXXXXXXGYDRDRIRRRCRLHKLDDMVXXXXXXXXXXXXXXXXXCGFPGLKPRFCSEHKQDGMLNLKTRAFRC 309
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BLAST of mRNA_Ecto-sp13_S_contig15145.3880.1 vs. uniprot
Match: D7FQ52_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.870e-5
Identity = 28/62 (45.16%), Postives = 31/62 (50.00%), Query Frame = 0 
Query:  252 DRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYTRC 313
            DR+RRRCRL                       CCG  G K RFCSEHKQ+GM+NLK    RC
Sbjct:  249 DRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKQEGMVNLKTRAFRC 310
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15145.3880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYH5_9PHAE2.430e-8894.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMP7_ECTSI3.720e-4078.91EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FQ52_ECTSI1.870e-545.16EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15145contigEcto-sp13_S_contig15145:315..4244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15145.3880.1mRNA_Ecto-sp13_S_contig15145.3880.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15145 315..4244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15145.3880.1 ID=prot_Ecto-sp13_S_contig15145.3880.1|Name=mRNA_Ecto-sp13_S_contig15145.3880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
YAEPGQKKPKYCFLHKKPGHIDVRNKRCEVPNCEIRPHYGYDGEAPRFCA
QHRAEGMHNLRSRRCQSEGCVRYASCGHAGNPPVFCGAHKTIGMVNLIGR
RCAVDSCETYASYGVTGEKARYCAKHKGNNMVNLTVKHCEFSGCVTQPSF
NYAGQRKARFCARHRLEHMVDVLDRHCAQHGCDRQPIYGQAGEKEGRPMW
CPDHRPPGSFDVKTSRCQEPSCLKHPRHDNRSTRAYRQIALARVQCYGYD
RDRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQ
DGMLNLKVPYTRCMSTAPLLVE*
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