mRNA_Ecto-sp13_S_contig15130.3874.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A6H5KLT5_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLT5_9PHAE) HSP 1 Score: 334 bits (857), Expect = 4.170e-114 Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 1
Query: 1 MMAPMRVLAGISLCLVVVDGYNAKVPTMSGGNGGTHPRGRFIAKAACAAASLTGLVVAAPFIVGSDSADGVAAMAAETARNVAVAPALAEEESGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
MMAPMRVLAG+SLCLV+VDGYNAKVPTMSGGNGGT PRGRFIAKAACAAASLTGL VAAPFIVGSDSADGVAA+AAETARNVAVAPALAEE GSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK
Sbjct: 1 MMAPMRVLAGLSLCLVIVDGYNAKVPTMSGGNGGTQPRGRFIAKAACAAASLTGLAVAAPFIVGSDSADGVAAVAAETARNVAVAPALAEEALGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 182
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A835YRY8_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY8_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.480e-27 Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 214 AAMAAETARNVAVAPALAEEESGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
AA+ A VA AP A E K V+F V+L+ + G+FV++V PDWAP GAARF L + FF D RFFRVLKGFVAQFGI+GDP V AK+R + ++DDPVTQSNK
Sbjct: 54 AAVGAAAGVGVAAAPKGAFAEGDPK---VQFQVELAPGKQGTFVMQVHPDWAPKGAARFLELVDSDFFTDVRFFRVLKGFVAQFGISGDPQVSAKWRASAIRDDPVTQSNK 161
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A7S2XWI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWI2_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.150e-27 Identity = 53/83 (63.86%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 295 YVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSN 543
YVKFDVQLSD ++GSFV+EV P WAP GA RF L FF CRFFRV+K FVAQFGI+G+P VQ+++R ++DDPVTQ N
Sbjct: 30 YVKFDVQLSDHDTGSFVLEVNPSWAPNGAQRFKELLDDDFFAGCRFFRVIKDFVAQFGIHGNPGVQSQWRDQKIKDDPVTQKN 112
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A7S2RJE7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJE7_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.930e-27 Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 253 APALAEEESGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSN 543
AP LAE+ + P V F VQLS EE G ++V PDW+P GA RF L +AGF+ DCRFFRVL GFVAQFGINGDPAV +++RG ++DDPVT +N
Sbjct: 97 APGLAED--AAAPFDVLFTVQLSPEEEGQVGLKVHPDWSPRGAQRFRELVEAGFYNDCRFFRVLPGFVAQFGINGDPAVMSQWRGRNLRDDPVTVTN 191
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A7S3FBK8_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FBK8_9EUKA) HSP 1 Score: 101 bits (252), Expect = 1.520e-23 Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 289 PSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
P V+FDV L +++G F +EV PDWAPLGAARF + +A FF+ RFFRV+ GF+AQFGI+ P + A+++G + DDPV +SNK
Sbjct: 31 PFVVEFDVTLGSKDTGKFQLEVHPDWAPLGAARFKEMVEAEFFKGVRFFRVISGFMAQFGIHPKPTIAAEWKGKALTDDPVVESNK 116
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A7S0CL93_9STRA (Peptidylprolyl isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CL93_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.630e-23 Identity = 52/100 (52.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 244 VAVAPALAEEESGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSN 543
+A +PALA++E G K + ++ + SG+FV+++RP WAP+GA RF L++AGF+ DCR FRV+ GF++QFGINGDP +QAKY+ + M+DDPV +SN
Sbjct: 81 LAPSPALADDE-GRKIEFTVQNLDGLEGLSGTFVIQMRPTWAPIGAQRFEELTEAGFWNDCRIFRVIPGFISQFGINGDPKMQAKYKVS-MRDDPVRESN 178
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: K0T578_THAOC (Peptidylprolyl isomerase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T578_THAOC) HSP 1 Score: 102 bits (255), Expect = 1.700e-23 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1
Query: 328 ESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSN 543
E+G+F+V RPDWAP+GA RF L GFFE+CR FRVL GF+AQFGINGDP VQAK+R ++D+PV SN
Sbjct: 93 ETGTFIVLTRPDWAPIGAGRFETLVSEGFFEECRVFRVLPGFIAQFGINGDPDVQAKWRSNYLEDEPVAVSN 164
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A346A3Y1_9HYPH (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A3Y1_9HYPH) HSP 1 Score: 101 bits (251), Expect = 2.000e-23 Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 253 APALAEEESGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
APA+A+E + VKFD GSFVV+V DWAPLGA RF L K+GF++D RFFRV+ GF+ QFGING+P A++R ++DDPV QSNK
Sbjct: 21 APAVAQEAAAPATYKVKFDTT-----KGSFVVQVNRDWAPLGADRFYNLVKSGFYDDVRFFRVISGFMVQFGINGNPNTMAQWRDKPVKDDPVKQSNK 113
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A2E3GXH2_9PLAN (PPIase cyclophilin-type domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E3GXH2_9PLAN) HSP 1 Score: 103 bits (256), Expect = 2.980e-23 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 331 SGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
+G FVVEV PDWAP GAARF L ++GF+++ RFFRV+ GF+ Q+GINGDPAVQ+++R V+QDDPV QSNK
Sbjct: 57 AGDFVVEVHPDWAPRGAARFKNLVESGFYDNTRFFRVVPGFMVQWGINGDPAVQSQWRDKVIQDDPVRQSNK 128
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Match: A0A7S2CBJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBJ7_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.840e-23 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 298 VKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNK 546
V FD+ D G+ V+EV P+WAPLGA RF L G F++ RFFRVL GF+AQFGI+GDPAV AK+RG ++DDPV SNK
Sbjct: 95 VTFDIVNEDGTGGAVVIEVHPEWAPLGAERFKELVSTGTFDENRFFRVLPGFIAQFGISGDPAVSAKWRGQNLRDDPVKVSNK 177 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15130.3874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15130.3874.1 >prot_Ecto-sp13_S_contig15130.3874.1 ID=prot_Ecto-sp13_S_contig15130.3874.1|Name=mRNA_Ecto-sp13_S_contig15130.3874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp MMAPMRVLAGISLCLVVVDGYNAKVPTMSGGNGGTHPRGRFIAKAACAAAback to top mRNA from alignment at Ecto-sp13_S_contig15130:978..4248+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15130.3874.1 ID=mRNA_Ecto-sp13_S_contig15130.3874.1|Name=mRNA_Ecto-sp13_S_contig15130.3874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3271bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15130:978..4248+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15130:978..4248+ >mRNA_Ecto-sp13_S_contig15130.3874.1 ID=mRNA_Ecto-sp13_S_contig15130.3874.1|Name=mRNA_Ecto-sp13_S_contig15130.3874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15130:978..4248+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |