mRNA_Ecto-sp13_S_contig151.3851.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig151.3851.1
Unique NamemRNA_Ecto-sp13_S_contig151.3851.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: D8LFK5_ECTSI (WD66_PHYPO66 kDa stress protein (P66) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK5_ECTSI)

HSP 1 Score: 1179 bits (3050), Expect = 0.000e+0
Identity = 636/643 (98.91%), Postives = 641/643 (99.69%), Query Frame = 1
Query:  148 MASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKDISVFDT 2076
            MASN+KPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXX GACTHTW+ISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNK+TGIAACSAGVVSVGWDDTLRLAPLDGESG GGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDA+VRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXX+PAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKDISVFDT
Sbjct:    1 MASNIKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXXGACTHTWSISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKITGIAACSAGVVSVGWDDTLRLAPLDGESGSGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDAEVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXNPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKDISVFDT 643          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A836C9B9_9STRA (66 kDa stress protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B9_9STRA)

HSP 1 Score: 635 bits (1638), Expect = 7.470e-214
Identity = 334/641 (52.11%), Postives = 420/641 (65.52%), Query Frame = 1
Query:  148 MASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKE-SKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVA-VAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAP-VTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVW-RAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKD 2058
            MA+ VKPC+D+PSF+ H+ PNPST RG+N  +G HPK+ +KI+YPSGKFI+VRD+ DP   FVYRGHN+  TVAKFSP+G WVAS D TGKVR+W+WDNPEH LK E+  + G +KDLAW  ESKRIV  G G GVN RAF WDTG+NLGE+VGH+K V+S DYRQ RP++IMT SED RT+F++GPPF MDHSN +QH+NFVN VRFSPDG++IAT  SD KVW+YDG TGEP+  LG A   H GSI+ L                        S A  HTWT +D+P VGDMQV+ V    +   SVS+ G++++LD   ERP  V  AHQ A+TAM+ S ++       G ++TGSF GV+CAW  A G A R  G   A  + GA HSNKV+GIA  +AG+VSVGWDDT+RLAP        GG  +T S    GQPCGV+ANA S+L AV T+ GV + R T     LS  YTP S+++  G  E+AVG  +G + +Y  +G  L ETK +   RG    VA+SPDG  LA GD+ +E+ V+ RAGG WD  V+GLWQFHT+                          S AKPR+R+ Y FA++DG+ GL W+    +ASAGGDHCVA WD+ K+
Sbjct:    1 MANLVKPCIDNPSFLGHFIPNPSTVRGNNFHMGVHPKQPNKIVYPSGKFIIVRDLDDPAAGFVYRGHNAVATVAKFSPSGCWVASGDTTGKVRVWSWDNPEHGLKAEINAIAGPVKDLAWDSESKRIVAVGEG-GVNMRAFTWDTGNNLGELVGHAKGVLSVDYRQARPFKIMTASEDMRTLFFKGPPFSMDHSNKDQHSNFVNVVRFSPDGARIATAGSDYKVWIYDGTTGEPVHELGAA---HTGSIFGLSWCPDSNHLVTASADKTCRLWNVDSKAVEHTWTFADAPEVGDMQVSCVTVSADHAASVSVRGDISLLDLQQERPAKVISAHQVAVTAMSPSTLN-------GALVTGSFDGVVCAW-AANGVATRLQGQLGAKTICGAAHSNKVSGIAVSAAGIVSVGWDDTIRLAPA-------GGHAYTESASLNGQPCGVSANAGSELAAVVTSSGVAVYRKTALVAELSVNYTPKSVSLF-GESEVAVGGDDGIVRIYALSGSTLTETKALPPVRGAAASVAFSPDGAHLAVGDSQKEIVVYARAGGAWDPLVQGLWQFHTSTVAALAWSPDNTLLASGGPDETIYVWSIAKPRKRITYKFAHRDGISGLCWVDADTLASAGGDHCVARWDVGKE 621          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A7S1U9R9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9R9_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 1.980e-136
Identity = 240/620 (38.71%), Postives = 347/620 (55.97%), Query Frame = 1
Query:  208 NPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCG-AGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGV-AANADSDLVAVATNQGVTLLRGTTPAVGL-SATYTPSSIAMAPGAGEIAVGSKEGKIYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKD 2058
            +PSTERG N+ LGTHPKE+K+IY SGK +VVR + DP+D FVYRGHN+ TTVAKF+PNG+WV SAD +GK+ +W+WDNPEH +K E   + G I DL WGPESK+I   G  G G++ +  MWD+G+ +GE++GH+  V+S  Y+  RPYR+++  ED+  I Y GPPF+  H++ + H+N+V CVRF+PDG   A+ S+DKK+  YD K G    T+  A   HAGSIYS                         +      +T  D   + +M+V V +  ++++S+SL G++ +   G + P  V+Q HQ  I A      S       G I TGS  GV C W+   G   +  G     +TGA+H  +V G+A  ++GVVS G+DDT+R A L       G   +  S GTTGQP G+ A    SD  A+ T++G+ + +GT  A  L +  Y    +AM      +AVG+K   IY+Y   G  L +T +V GHRGEV+ +A+SP G  LAAGD+ +EV V +   DW   ++G W FHT+                          +  K  ++    + +  GV  +A+L +  + + G D CV TW++ ++
Sbjct:   23 SPSTERGYNVHLGTHPKENKVIYCSGKNVVVRSIDDPSDCFVYRGHNAATTVAKFAPNGYWVCSADSSGKIMVWSWDNPEHIVKYEGILMAGKITDLEWGPESKKITVAGDGGGGLSCKTIMWDSGNAVGEMIGHTANVLSIAYKPSRPYRVLSAGEDNAVIMYNGPPFRQAHTSRD-HSNYVQCVRFAPDGKTAASVSNDKKIIFYDAKEGTVTGTIDNA---HAGSIYSCSWSPDSTMLATSSADKKVKVWNVETKEAVAEFT--DGTDLTNMKVGVVYKEDKIISLSLGGDITVWQVGQDAPLVVFQGHQTPIVAAAVDSES-------GTIFTGSSDGVCCYWNAGVG--SKFGGQIPRSITGAIHGGRVAGMAFTASGVVSAGYDDTIRFADL-------GSHAYGESTGTTGQPIGIDAVGPSSDTFALVTSEGIFVHQGTACAAHLENLGYEALCVAMNGAGDTVAVGAKNMNIYIYSFDGSSLTQTNMVSGHRGEVSSLAFSPCGGFLAAGDSYKEVRVHKTE-DWSIKIQGRWVFHTSRVTCLSWSPNGINLASGSNDTKVIIWNLKKTLKKKELNYVHMGGVNDVAYLDENTLVTVGNDQCVCTWNLAEE 619          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A0P1A7D1_PLAHL (WD40 repeat stress protein/actin interacting protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7D1_PLAHL)

HSP 1 Score: 433 bits (1114), Expect = 4.410e-136
Identity = 309/644 (47.98%), Postives = 402/644 (62.42%), Query Frame = 1
Query:  151 ASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDS-PGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGT-----TPAVGLSATYTPSSIAMAPGAGEIAVGSKEG-KIYVYETAGD-ELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITK 2055
            ASN    V  PS  +   PNP+T RG   VL  HPKE K+IY SGK ++VR+++DPTD FVY+GHN  TTVAKFSP+G+WVAS D++GKVR+W++DNPEH LK+E+    G IKDL+W PESKRIV  G G G+ AR FMWDTG++LGE+VGH KR++S DYRQ RP+RIMT SED     Y+GPPFK   +NNN HTNFVNCVRFSP+G    +  SDK   L                          XXXXXXXXXXXXXXXXXXXXXXXX       +T+  + P V DMQVAVA+C   L+S+SL+G++N LD  +  RP+ + Q HQ +I ++   P       A  ++LTGS+ GV+C+W   T          A  + G  H+ K+TGIAA S  + S  WDD LR +  D E        +TAS     QP GVA   +S L  V+TN+G+ L++       TP       +TP+ +A++P    +AVGS+E  KI++++ A    L E+  + GH G +T VA+SPDG+ LAAGD  REV VW       A V+G+W +H+  XXXXXXXXXXXXXXXXXXXXXXXXX    P ++  + F++KDGV  + +LS+  + S G D CV  WD++ 
Sbjct:    4 ASNPTEKVPPPSLKATVGPNPTTNRGAPSVLSIHPKEPKLIYCSGKLVIVRNLEDPTDTFVYKGHNEPTTVAKFSPSGYWVASGDVSGKVRVWSYDNPEHTLKLEIPVFAGEIKDLSWDPESKRIVAVGDGRGLMARVFMWDTGNSLGEIVGHQKRILSVDYRQTRPFRIMTASEDFNVCVYEGPPFKFKQNNNNLHTNFVNCVRFSPNGEFAVSVGSDK---LMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTLGGTKPQVKDMQVAVAWCQNYLISLSLSGDLNFLDVNNPSRPKQIVQGHQVSIVSLATQP-------AQNRLLTGSYDGVVCSWTSKT----------AKALEGTHHTAKITGIAANSNQLASCAWDDQLRFSN-DCE--------YTASTALNAQPNGVAIT-ESGLAVVSTNKGLKLVQDQKVIFETPEFS----WTPTCVAISPSEDLVAVGSQEDMKIHLFDVANKASLVESGEIAGHLGALTSVAFSPDGSHLAAGDTYREVRVWDVATR-SAKVQGMWVYHSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXNNPMKKRSFEFSHKDGVTAVKFLSETELVSVGNDACVNYWDLSS 612          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: M4B2S9_HYAAE (Uncharacterized protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=M4B2S9_HYAAE)

HSP 1 Score: 428 bits (1100), Expect = 4.060e-134
Identity = 306/634 (48.26%), Postives = 398/634 (62.78%), Query Frame = 1
Query:  178 HPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDS-PGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVAANADSDLVAVATNQGVTLLRGT-----TPAVGLSATYTPSSIAMAPGAGEIAVGSKEG-KIYVYETA-GDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDIT 2052
            +P+  +   PNP+T RG   VLG HPKE KIIY SGK +VVR+++DPTD FVY+GH+  TTVAKFSPNG+WVAS D++GKVR+W++DNPEH LK+EV    G IKDL+W PESKRIV  G G G  AR F +DTG+++GE+VGH KR++S DYR  RP+RIMT SED     Y+GPPFK   +N+N HTNFVNCVRFSP+G    +  SDK   L                          XXXXXXXXXXXXXXXXXXXXXXXX       +T   S P V DMQVAVA+C   L+S+SL+GN+N LD  +  +P+   Q HQ +I ++   P          +ILTGS+ GV+C+W          T   A  + GA H+ K+TGI+A S  + S GWDD LR A  D E        + A+     QP GVA   +S L  V+TN+GV LLR       TP       +TP+ +A++P    +AVGS+E  KI++++   G  L E+  + GH G +T V++SPDG+LLAAGD  REV VW       A V+G+W +H+  XXXXXXXXXXXXXXXXXXXXXXXXX    P ++  + F++KDGV G++++S+  + S G D C+  WD++
Sbjct:    6 NPTEKATIGPNPTTNRGAPSVLGVHPKEPKIIYCSGKLVVVRNLEDPTDTFVYKGHHEPTTVAKFSPNGYWVASGDVSGKVRVWSYDNPEHTLKLEVPVFAGEIKDLSWDPESKRIVAVGDGRGFMARVFTYDTGNSIGEIVGHQKRILSVDYRPTRPFRIMTASEDFNVCVYEGPPFKFKQNNSNLHTNFVNCVRFSPNGDFAVSVGSDK---LMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTFGGSKPQVKDMQVAVAWCQNHLISLSLSGNLNFLDLNNPSQPKQTVQGHQVSILSLATEPTQH-------RILTGSYDGVVCSW----------TSKVATTLAGAHHTAKITGISATSNQIASSGWDDQLRFAN-DNE--------YIATEALNAQPNGVALT-ESGLAVVSTNKGVKLLRDQKLVFETPEFS----WTPTCVAISPSEDLVAVGSQEDMKIHLFDVVNGSSLVESGEILGHLGALTSVSFSPDGSLLAAGDTYREVRVWDVASR-SAKVQGMWVYHSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXNSPMKKRVFDFSHKDGVTGVSFVSETELVSVGNDACLNYWDLS 604          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A485KKR6_9STRA (Aste57867_8573 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKR6_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 3.280e-133
Identity = 286/644 (44.41%), Postives = 381/644 (59.16%), Query Frame = 1
Query:  148 MASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTG-QPCGVA----ANADSDLVAVATNQGVTLLR-GTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIY-----VYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATW 2043
            M++N    + +P+  + ++P+P+T RG   VL  HPKE KIIY +GK +VVRD+ +P D F+Y+GHN  TTVAKFSPNG+WVASAD+TGKVR+W++DNPEH LK+EV    G +KDLAW PESKRI   G G    +R FMWDTG+++GE+VGH+KR++S DY+  RP+RI+T SED     ++GPPFK  HS    HTNF NCVR+SPDG    +  SDK + LYD KT E L+        H+ SIYS+                        S +   T+T   +  V DMQ +VA+ G+ LVS+SL+G++N LD  +   P  V Q HQ ++ A+   P SA        I+TGS+ G + AW       K  TG +   + GA H+ KVT I      V S GWDD +R   L   +       ++ SVG  G QP  VA    A++ S L AV TN+GV L+  G       + T+TP+S+A++P   ++AVG  E +       V+      L ET +  GH G +T +A+SPDG+LLAAGD+AREV VW       A + G W     XXXXXXXXXXXXXXXXXXXXXXXXXX   KP  R  + + +KDGV G+ +++D  + S G D  V TW
Sbjct:    1 MSNNPTERLPNPNLKATFSPHPTTTRGSPTVLNVHPKEPKIIYCTGKLVVVRDLVNPVDCFIYKGHNDATTVAKFSPNGYWVASADVTGKVRVWSYDNPEHTLKVEVPVFAGEVKDLAWDPESKRIAAVGDGRNTMSRVFMWDTGNSIGEIVGHAKRIMSVDYKPTRPFRILTCSEDFNVCAFEGPPFKFKHSIP-AHTNFANCVRYSPDGVHAISVGSDKGMVLYDAKTSEKLAVFPVE---HSVSIYSVAWSPDSKQVLTASGDKTVKLWDVASLSVVTTFTFGTA--VQDMQCSVAWVGDFLVSLSLSGDLNYLDVTNPSTPSRVLQGHQVSLQAVAVDPESA-------TIVTGSYDGAVVAW-------KNSTGHR---LGGAPHTAKVTSIDVHKGLVASGGWDDVVRFGSLADAT-------YSGSVGLNGAQPSDVALATHASSGSILCAVGTNKGVKLIADGQLAFESPNFTWTPTSVAISPNGAQVAVGGDEDRNIHLFDIVFANGAFSLVETSIFTGHNGALTSIAFSPDGSLLAAGDSAREVRVWEVATA-TAKIAGQWVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPANRHKFEYTHKDGVMGIKFMADDQLISVGNDSSVHTW 613          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A5D6Y7H0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7H0_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 1.780e-131
Identity = 307/640 (47.97%), Postives = 394/640 (61.56%), Query Frame = 1
Query:  154 SNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDS-PGVGDMQVAVAFCGEQLVSVSLNGNVNMLD-AGSERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVA-ANADSDLVAVATNQGVTLL-RGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEG-KIYVYET--AGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDIT 2052
            SN    +  P   +   PNP+T RG   VLG HPKE KIIY SGK +VVR+++DP+D FVY+GHN +TTVAKFSP+G+WVAS D++GKVR+W++DNPEH LKIEV    G IKD+AW PESKRIV  G G  + AR FMWDTG++LGE+VGH KR++S DY+  RP+RIMT SED     Y+GPPFK   +N+  H NFVNCVR+SPDG+   +  SDK   L                          XXXXXXXXXXXXXXXXXXXXXXXX+ A    +T   + P V DMQVAVA+C + LVS+SL+G++N+LD A    P+ V QAHQG+I A+          AA  ++LTGS+ GV+CAW+  T          A  + G+ HS K+TGIAA +  V SVGWDD +R A  +  +       ++AS     QP GVA    DS L  V++N+GV LL  G          +TP+ +A++P    +AVG  E  KI++++   +G  L E   + GH G +T VA+SPDG  LAAGDA REV VW                   XXXXXXXXXXXXXXXXXXXXXXXXXX  A P  +  + FA+KDG  G+ ++++  + S G D CV  W ++
Sbjct:    5 SNPTEKIPPPQLQATLPPNPTTTRGAPSVLGVHPKEPKIIYCSGKLVVVRNLEDPSDTFVYKGHNEQTTVAKFSPSGYWVASGDVSGKVRVWSYDNPEHTLKIEVPVFAGEIKDIAWDPESKRIVAVGDGRALMARVFMWDTGNSLGEIVGHQKRILSVDYKPTRPFRIMTASEDFNVCVYEGPPFKFKQNNSGLHANFVNCVRYSPDGAFAVSVGSDK---LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAVVTKFTFGGAAPQVKDMQVAVAWCRDHLVSLSLSGDLNLLDVAHPATPKRVVQAHQGSILALATD-------AARSRVLTGSYDGVVCAWEAKT----------ATVLGGSAHSGKITGIAANARQVASVGWDDHIRFADAEAAA-------YSASAPLNAQPTGVALGEGDSPLAVVSSNKGVKLLVDGRVVFETPEFAWTPTCVALSPAGDMVAVGGAEDMKIHLFDVVDSGRALVEAGEIVGHLGALTSVAFSPDGARLAAGDAYREVRVWDVASRXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANPMSKRSFEFAHKDGATGVRFVAEDQLVSVGNDACVNFWQLS 616          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A6G0WHC6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHC6_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 2.010e-131
Identity = 301/636 (47.33%), Postives = 395/636 (62.11%), Query Frame = 1
Query:  172 VDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTG-QPCGVAANADSD----LVAVATNQGVTLLR-GTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGK-IYVYET----AGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATW 2043
            +  P+  S ++P+P+T RG   VL  HPKE KIIY +GK ++VRD+ +P D F+YRGHN  TTVAKFSP+G+WVASAD++GK+R+W+WDNPEH LK+E+    G +KDL+W PESKRIV  G G  + AR FMWDTG+++G++VGHSKR++SCDY+  RP+RI+T SED     Y+GPPFK  HS    HT+F NCVR+SPDG    +  SDK + LYD KT E ++        HA SIYS+ XXXXXXXXXXXXXXXXXXXXXXX        T   +  V DMQ  V + G+ LVS+SL+G++N LD  +  +P  V Q HQ ++ A+   P +A        I+TGS+ G + AW  + G            + GAVH+ KVT I      V S GWDD +R   L   +       ++ SVG  G QP  VA    S     L AV TN+GV L+  G       +  +TP+S+A++P    +AVG  E + I++++     +G  L ET    GH G +TC+++SPDGTLLAAGD+ REV +W       A V G W     XXXXXXXXXXXXXXXXXXXXXXXXXX   KP  R  + + +KDGV G+ +++D  + S G D  V TW
Sbjct:   11 IPSPNLKSTFSPHPTTSRGSPTVLSVHPKEPKIIYCTGKLVIVRDLANPVDCFIYRGHNDTTTVAKFSPSGYWVASADVSGKIRVWSWDNPEHTLKVEIPVFAGEVKDLSWDPESKRIVAVGDGRNLLARVFMWDTGNSIGDIVGHSKRIMSCDYKPNRPFRILTASEDALVCAYEGPPFKFKHSIP-AHTSFANCVRYSPDGVHAVSVGSDKGMVLYDAKTSEKIAVFPVE---HAVSIYSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFGSA--VSDMQCGVVWVGDFLVSLSLSGDLNYLDINNPSKPLRVLQGHQVSLQAIAVDPETA-------TIVTGSYDGAVVAWKGSNGHR----------LDGAVHTAKVTSIDVHKGLVASGGWDDVVRFGSLAEAT-------YSGSVGLNGAQPSDVALATHSASGTILCAVGTNKGVKLIADGQLAFESPNFAWTPTSVAISPSGTTVAVGGDEDRLIHIFQVVQNGSGFTLEETATYAGHSGALTCLSFSPDGTLLAAGDSGREVRIWDVATG-TARVAGQWVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPANRFKFEYTHKDGVMGVKFMADDHLISVGNDSSVHTW 615          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A2D4CBQ1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBQ1_PYTIN)

HSP 1 Score: 414 bits (1063), Expect = 1.350e-128
Identity = 267/532 (50.19%), Postives = 337/532 (63.35%), Query Frame = 1
Query:  202 APNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVA-ANADSDLVAVATNQGVTLLRGT-----TPAVGLSATYTPSSIAMAPGAGEIAVGSKEGK-IYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREV 1773
            APNPST RG   V+G HPKE+KIIY SGK +VVR++ DPTD FVY+GHN  TTVAKFSP+G+WVAS D +GKVRIW++DNPEH LKIEV    G IKDL+W PESKR+V  G G  + AR FMWDTG+ LGE+VGH KR++S DY+  RP+RIMT SED     ++GPPFK   +NNN H+NFVNCVR+SP+G    +  SDK   L                          XXXXXXXXXXXXXXXXXXXXXXXX      T+T S SP + DMQVAV +  E LVS+SL+G++N LD  +  +P+ + QAHQ +  AM   P         G +LTGS+ G++ +W              A+ +TG  H+ KVTGI A +A V S+GWDD +R A          G  + ASV    QP GVA A  +S LVAV+TN+GV LLR       TP       +TPS +A++P    +AVGS+E K I++++  GD L+ET  + GH G +T VA+SPDG LLAAGD+ RE+
Sbjct:   21 APNPSTTRGAPSVVGVHPKENKIIYCSGKLVVVRNLDDPTDTFVYKGHNEPTTVAKFSPSGYWVASGDSSGKVRIWSYDNPEHTLKIEVPVFAGEIKDLSWDPESKRVVAVGDGRAMMARVFMWDTGNXLGEIVGHQKRILSVDYKPTRPFRIMTASEDFNVCVFEGPPFKFKQNNNNIHSNFVNCVRYSPNGELAVSVGSDK---LMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTFTFSSSPQIKDMQVAVVWKNEHLVSLSLSGDLNYLDLENPSKPKKIVQAHQVSTLAMATEPTR-------GLLLTGSYDGIVNSWHDKL----------ASTLTGQAHTAKVTGIDANAAIVASIGWDDQVRFAT---------GTEYIASVPLGAQPNGVAVAPGNSTLVAVSTNKGVKLLRDQRLVFETPEFA----WTPSCVAVSPAGDLVAVGSQEDKKIHLFDVVGDALKETGEIVGHLGALTAVAFSPDGKLLAAGDSYREI 519          
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Match: A0A024TGT1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGT1_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 3.680e-128
Identity = 282/647 (43.59%), Postives = 380/647 (58.73%), Query Frame = 1
Query:  151 ASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIVVRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTNFVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYSLXXXXXXXXXXXXXXXXXXXXXXXXSGACTHTWTISDSPGVGDMQVAVAFCGEQLVSVSLNGNVNMLDAGS-ERPRDVYQAHQGAITAMTRSPVSAGGGAAAGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACSAGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTG-QPCGVA----ANADSDLVAVATNQGVTLLRGTTPAVGLSAT--YTPSSIAMAPGAGEIAVGSKEGK-IYVYETAGDE-----LRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGDWDADVRGLWQFHTAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAKPRRRVHYTFANKDGVEGLAWLSDGVVASAGGDHCVATWDI 2049
            +SN    +  P+  + + P+P+T RG   V+G HPKE KI+Y +GK +VVRD+ +P D  +Y+GHN  TTVAKFSPNG+WVASADI GKVR+W++DNPEH LK+EV    G +KDL+W PESKRIV  G G  V++R FMWDTG+++GE+VGH KR++S DY+  RP+RI+T SED     ++GPPFK  HS    H+NF NCVR+SPDG    +  SDK + LYD K+ E L++       HA SIYS+                        + +   T+T   S  + DMQVAV + G+ LVS+SL+G++N LD    + P  V Q HQ ++ A+          A  G ++TGS+ G + AW  AT G +          TGA H+ KVT I      V S GWDD +R   +   +       ++ SVG  G QP  VA    A + + L AVATN+GV LL     A   SAT  +TP+S+AM P   ++A+G  E + ++V+    +      +    +   H G +T +AYSPDGTLLA GDA REV VW A  D    V G W  HT  XXXXXXXXXXXXXXXXXXXXXXXXX+  +P  R  +  A++DGV  + +++D  + S G D  + TW +
Sbjct:    4 SSNPVERLPDPNLKATFCPHPTTSRGSPSVIGVHPKEPKIVYCTGKLVVVRDLANPADCLLYKGHNDATTVAKFSPNGYWVASADIAGKVRVWSYDNPEHTLKVEVPVFAGEVKDLSWDPESKRIVAVGDGRTVSSRVFMWDTGNSIGEIVGHMKRIMSVDYKPTRPFRILTASEDSTIRAFEGPPFKFKHSIP-AHSNFANCVRYSPDGIHAVSVGSDKGMVLYDAKSSEKLASFPVE---HAVSIYSVAWSPDSKQLLTASGDKTVKLWDVGTMSVVTTFTFG-SGAIEDMQVAVVWVGDFLVSLSLSGDLNYLDVTRPDTPLRVVQGHQVSLQALAVD-------ADTGVLVTGSYDGAVVAWH-ATSGRR---------FTGAAHTAKVTSIDVHRGIVASGGWDDVVRFGSVVDTA-------YSGSVGLNGAQPSDVALATHAASGAVLCAVATNKGVKLLVNGALAFESSATATWTPTSVAMTPSGEQVALGGDEDRRVHVFHVVSNGETWSLVERDDMALTHNGSITTLAYSPDGTLLAVGDAGREVRVWDAK-DGSLRVGGQWVHHTTRXXXXXXXXXXXXXXXXXXXXXXXXXNVDQPANRHKFENAHRDGVMSVKFVADDQLVSVGNDAAIHTWQV 620          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig151.3851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK5_ECTSI0.000e+098.91WD66_PHYPO66 kDa stress protein (P66) n=2 Tax=Ecto... [more]
A0A836C9B9_9STRA7.470e-21452.1166 kDa stress protein n=1 Tax=Tribonema minus TaxI... [more]
A0A7S1U9R9_9STRA1.980e-13638.71Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0P1A7D1_PLAHL4.410e-13647.98WD40 repeat stress protein/actin interacting prote... [more]
M4B2S9_HYAAE4.060e-13448.26Uncharacterized protein n=27 Tax=Peronosporaceae T... [more]
A0A485KKR6_9STRA3.280e-13344.41Aste57867_8573 protein n=1 Tax=Aphanomyces stellat... [more]
A0A5D6Y7H0_9STRA1.780e-13147.97Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0WHC6_9STRA2.010e-13147.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4CBQ1_PYTIN1.350e-12850.19Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A024TGT1_9STRA3.680e-12843.59Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig151contigEcto-sp13_S_contig151:27205..33354 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1181.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LFK5
Preferred nameAIP1
Model size3202
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.positive regulation of actin filament depolymerization
EggNOG OGsKOG0318@1,KOG0318@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-04_001870.1
Cds size1932
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig151.3851.1prot_Ecto-sp13_S_contig151.3851.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig151 27898..32231 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462803.8715253-UTR-Ecto-sp13_S_contig151:27204..272871681462803.8715253-UTR-Ecto-sp13_S_contig151:27204..27287Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig151 27205..27287 +
1681462803.8861055-UTR-Ecto-sp13_S_contig151:27833..278971681462803.8861055-UTR-Ecto-sp13_S_contig151:27833..27897Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig151 27834..27897 +
1681462803.929057-UTR-Ecto-sp13_S_contig151:32231..333541681462803.929057-UTR-Ecto-sp13_S_contig151:32231..33354Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig151 32232..33354 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462803.8967726-CDS-Ecto-sp13_S_contig151:27897..281671681462803.8967726-CDS-Ecto-sp13_S_contig151:27897..28167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig151 27898..28167 +
1681462803.9109337-CDS-Ecto-sp13_S_contig151:28598..289941681462803.9109337-CDS-Ecto-sp13_S_contig151:28598..28994Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig151 28599..28994 +
1681462803.9201133-CDS-Ecto-sp13_S_contig151:30965..322311681462803.9201133-CDS-Ecto-sp13_S_contig151:30965..32231Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig151 30966..32231 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig151.3851.1

>prot_Ecto-sp13_S_contig151.3851.1 ID=prot_Ecto-sp13_S_contig151.3851.1|Name=mRNA_Ecto-sp13_S_contig151.3851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=644bp
MASNVKPCVDHPSFVSHWAPNPSTERGDNLVLGTHPKESKIIYPSGKFIV
VRDVKDPTDVFVYRGHNSKTTVAKFSPNGFWVASADITGKVRIWAWDNPE
HQLKIEVFGLGGAIKDLAWGPESKRIVCCGAGSGVNARAFMWDTGSNLGE
VVGHSKRVISCDYRQVRPYRIMTGSEDHRTIFYQGPPFKMDHSNNNQHTN
FVNCVRFSPDGSKIATCSSDKKVWLYDGKTGEPLSTLGEAAGAHAGSIYS
LAWSPDSSSVATASADKTVRLFDAASGACTHTWTISDSPGVGDMQVAVAF
CGEQLVSVSLNGNVNMLDAGSERPRDVYQAHQGAITAMTRSPVSAGGGAA
AGKILTGSFTGVLCAWDPATGGAKRCTGGKAAPVTGAVHSNKVTGIAACS
AGVVSVGWDDTLRLAPLDGESGGGGGPVFTASVGTTGQPCGVAANADSDL
VAVATNQGVTLLRGTTPAVGLSATYTPSSIAMAPGAGEIAVGSKEGKIYV
YETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAREVTVWRAGGD
WDADVRGLWQFHTARVACLAWSPEGTYLASGGLDENVFVWSPAKPRRRVH
YTFANKDGVEGLAWLSDGVVASAGGDHCVATWDITKDISVFDT*
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mRNA from alignment at Ecto-sp13_S_contig151:27205..33354+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig151.3851.1 ID=mRNA_Ecto-sp13_S_contig151.3851.1|Name=mRNA_Ecto-sp13_S_contig151.3851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig151:27205..33354+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCTCTGTCCGTGCTGCGCAGGGTTGTAATTGCTCCCGCACGCAAAACA AGACCTGAGGACAACCTGCTGTATTGCGCTACGGTGAGCTCTGCCTCGAG ATGTACGGCTAGGTTTCGGTCACCGCAAGCTGATACCCGCCTGCCTGCTG TGCTGCTGAGCTGAAATCGTGTCTCTGCGGCTGTCGCCCATTCCTGCTGC TGTGCGCGAGCCCACAAGCATGATACGAGTGCAGCAGTGTAGACCAATGT CCCTTAGGCCTCACGTAGAGTTAGCTTCTTTCAGCTGGCACACAATCTAG AAGGTGCACCATTCACATAACCTACGAGGGTGTTTGCTTTCTTCGGAGTT TGTCTCGTTGCAGAATTTGCGCGCGAATCCTTCCTCTCTTCCGTTGGCCG AAGAATTCCTCCGCCTTTTTTCACCCTTTCGGAACACCTACAGCAGTACC GGTTGTTGTCGCTGCTTGCTGAGAGTCGAGAGCTGAATACCGCAGCTATG AGGGGTAGGCTCTCCCCTGTTAACGTGCACCCTTTTGATTGCGAGTGAAT AGTCATATGCCATCGTTGCCGATTTGCTGCCATGCTGACACTTCACTGCT CCCCCACATGATGTGTTTGACCGCGGCAGACGAAGGAGCCGTTCCGCTAC AAGAAATAGGAGCAGGACTCCACGGCGCTCACTACATACAACCATGGCGA GCAACGTCAAGCCGTGCGTGGACCACCCCTCTTTCGTGTCCCACTGGGCG CCCAACCCGTCCACCGAGCGAGGGGACAACCTCGTCTTGGGTACGCACCC GAAGGAGTCCAAGATCATCTACCCGAGCGGAAAGTTCATCGTGGTGAGGG ACGTCAAGGATCCCACCGACGTGTTCGTCTACCGCGGCCATAACTCCAAG ACAACGGTGGCAAAGTTCTCCCCGAACGGGTTCTGGGTGGCCTCTGCGGA CATCACCGGGAAGGTGCGGTTCCAGCACAGCAGTGGACGCGACAGAGAGA GAGAGTCAGCCGCCTCTGTCGTTTTGCATTGTTCCTTTGCGTCGCAAGTG CTGTGTGTATCGTCAATACCCTTGCTGACCTCTGTATCCGTTGCTCAGAG AGGCATAGATTTGTGTACAAATACATCAGCAACACAGCAGTGTTTGGGAA CAACCATGCACAGGCAGAGCTAGGAACCTGCTGTTGTGTCAGCTAGGATG AAGGTTTCTAAGCGAGCAGGACGACGTGTAATACGGGCCGGTTGGTGGTT AGAAGTGACATTTTTGTCTTTTCCTCTGGCAGCTGTTGTACTTTGCGGCC GAATCCTCGCCCCGTTGGCCGTGTCCATCGCCCATACCTTGATAGAATTC CTAAACACCATCAACTGCTGTCAAAATGCCCCCAAACACAACAGGTGCGG ATTTGGGCGTGGGACAACCCGGAACACCAGCTCAAGATCGAGGTCTTCGG CCTGGGGGGCGCTATCAAGGATCTCGCATGGGGCCCGGAGAGCAAGCGGA TTGTGTGCTGCGGGGCGGGCTCCGGGGTGAACGCTCGTGCGTTCATGTGG GACACCGGGAGCAACCTTGGGGAGGTGGTGGGCCACAGCAAGCGGGTCAT CAGCTGCGACTACAGACAGGTCCGGCCGTACCGCATCATGACCGGGAGCG AGGATCACCGGACGATCTTTTACCAGGGGCCGCCGTTCAAGATGGACCAC TCCAACAACAACCAGCACACCAACTTCGTTAACTGCGTGCGGTTCAGCCC CGACGGCAGCAAGATTGCCACCTGCTCCTCAGACAAGAAGGTAGGATAGA CAGTCCTTGGAGCTTTCTTTCTCGCCCGCGGACTTGCTGCATCTGTCTCG CCCGCACGCTTGCGGTATCTGTCGTAGCTGTAATAGCCCTTTGGTTTCGT CATCTTTTTTTTTTTTAGGCATTCCTCGATCAACAGCAATCACCCATCTC TCGTTCGTAGGCGAGTTACCGCCAGGTTGCGAGTCAGCGCACGGTCCGGA GTCGTCGCACAGGGGTGCGATGAAAAGTAGATGGCACAATTATTTAGTTC GATTTCCGCACAGGGTCCGGAGTTACCGCACAGGGGTGCGATGACTCGCA ACCTACAATAGGGTAGTTGAGTGGCAGCGATTTCGAGGCAACTTTCACCC TAGGAACCATGCCAGTGCTGGCATGTAGCTCTGCTGCATGGGTAGGTAGG TCCTCGTCGCATACCACACGCGGAGGTACGAAGGAAATGAAACACATTGG TTTTGTCATTGGATCGGTAAACTTGAACATTGTCCATTCAATGAAAACAC GAGAAGAAACAGCAGCCATCAGCCAAAACAACGAAAACAAAAAGATTGTG GGTCGCGTGTAGGCACAACTCGCCGGCGGGAAGTTGCCCATGTTTTCCGC CCGCGGCATTTCGTATTTCGCCGCGTTTAATTTCGCCGCTTGTGTGTGTG TGTGTGTGTGTCTGTGTGTGTGTCTTTTGTTTTAGCATCGACCGCGCTAA CCGGCTGACCAATGAAAAGACGTCAGTCTTAGTGCGGTTGAAAACACAAC ACACTTCTATCTGCCATGAATTGGGACCCCGTGAGGGGGCAGCATGGGGG AGGCTAAACTATCCTCCGGATCAAAGACAGAAACGGTAGCAACAGAAGAA AACTGCACGCGTCTACCAAGGCTGTAAACATGCACTCGAGTTCGTTTGGG AGTGCTTTCACCATCATCTTCCTTGTGATCGCTACCATCATTCTCATCAC CCTTTTCACAGCAAAGTTTTGGCAGTTCTTCCCTAGCCCTGTGTCTTTTG TTGCGAGGAAGATCATCTGGCTCAAACCCTTTGCTCTCTTCCACTCCTCC ATGTTTCCCTCCTCCATCGACGTCTTCGTCCTCCTTTCTTCCTTTCCCTT TCCTTCGTCTCCGTCACTCCCAAAATAGTTACCCTCATTACTATCGTTGT CGCAGAGATCCCAACCGATTGGCCGTGGTGGAAGTTGGTCGATCAGTAGC CCATGATGTTCGCACCGACAGAAAACCGTCTCCGAATCCTTCTAGTGTTG TTGTTGTTTTGTTGTTGTTTCTCACATTAGCTCTATAGTCCACAAAAATG GGGAGCCCGTGGTCGCAAAAACCCGGCACATACGACGCCACGGGGAAACA AAACAACAACAGGGTACAAACCACTCGGGAAAGAAAACAAAATGAAAGAA AGAAAAGAACAGCTACCGTGCCGGTCGAGAAAGGAGCCCTCGAAGACCGA TCAAAATGAAACAAAATAAAAATAAAGATAAAATGGAGGACGCGTCCTCC ACCCGCCTACATGTGTGTGTGTGTGTGCTTTCTCGAAAACCTAGCATCCA CCGGGCTGTGGTTGGCTGACGTGCGCGTGCGTGTGGAAGTTGCGTGTGGA GCCTGCACCCGCAGCACAACTGAGGCGTCTGTGGGTCTGCATTTTTTTTT CTTTCAAGTACCGCACTTACCGGAGTCATCGCACGGTCCGGAGTCATCGC ACCCCTGTGCGATGAACATGACATTAGGGCGAAAATGTTTAAAAAACGAC CGCACGGCGGTGCGCTGACTCGCAACCTTACAGTATGTTATTGCCTTTTT CGTGTTGCGGAAGACTTGTTTCGTGAATCGTAGTCAAACAGGCCCCACCC AATCAATCGAGCGAAGTCACTTCCCCAGCTTCCCCATCCCTTTTTCCTTG TTTTTCACCTCGACTCCTCCCCCCCGCCTCCCCCGCCGACCTCGTCCGCG AACACCAACAGGTGTGGCTGTACGACGGGAAGACGGGAGAGCCGCTGTCC ACCCTGGGCGAGGCAGCGGGCGCTCACGCGGGCTCGATCTACTCCCTAGC CTGGAGCCCGGACTCTTCGTCCGTCGCGACCGCCTCCGCCGACAAGACCG TCCGCCTCTTCGACGCGGCCTCGGGCGCTTGCACGCACACGTGGACCATC TCCGACTCCCCGGGGGTCGGGGACATGCAGGTGGCGGTGGCCTTCTGCGG CGAGCAGCTAGTCTCGGTCTCCCTCAACGGCAACGTGAACATGCTCGACG CCGGCTCCGAGCGGCCCCGCGACGTGTACCAGGCCCACCAGGGGGCCATC ACGGCGATGACCCGGAGCCCGGTGTCCGCGGGGGGCGGGGCCGCCGCAGG CAAGATCTTGACGGGCTCCTTCACGGGGGTGCTGTGCGCGTGGGACCCGG CCACCGGCGGCGCGAAGCGGTGCACAGGAGGCAAGGCGGCCCCGGTAACC GGCGCCGTGCACAGCAACAAGGTCACCGGCATCGCCGCCTGCTCGGCAGG CGTCGTGTCCGTCGGCTGGGACGACACCTTGCGGCTCGCTCCTCTCGACG GCGAAAGCGGCGGCGGCGGGGGGCCCGTCTTCACCGCGTCGGTCGGGACG ACCGGCCAGCCGTGCGGCGTCGCCGCGAACGCGGACTCCGACCTCGTGGC CGTGGCCACCAACCAGGGTGTCACGCTCCTCCGCGGCACCACCCCCGCCG TCGGCCTGTCGGCGACGTACACTCCGTCCTCGATCGCCATGGCCCCCGGC GCCGGCGAGATCGCGGTCGGGTCCAAGGAGGGGAAGATCTACGTCTACGA GACGGCCGGCGACGAGCTGAGGGAGACCAAGGTCGTGGACGGCCACCGCG GGGAGGTGACCTGCGTCGCGTACTCCCCCGACGGGACCCTCCTGGCCGCC GGAGACGCCGCCCGCGAGGTCACGGTGTGGCGCGCGGGGGGAGATTGGGA CGCCGATGTGCGGGGGCTGTGGCAGTTCCACACGGCGCGCGTGGCGTGCC TGGCGTGGTCGCCGGAGGGAACGTACCTGGCGTCCGGCGGGCTCGACGAG AACGTGTTCGTGTGGAGCCCGGCCAAGCCGAGGCGCCGCGTTCACTACAC GTTCGCGAACAAGGACGGCGTGGAAGGGCTGGCCTGGCTGTCGGACGGGG TCGTGGCCTCAGCGGGCGGGGACCACTGCGTGGCGACGTGGGACATCACC AAGGACATTTCCGTGTTCGACACCTGAGATCGTTGTAGCACCCTTTCGTA TTGGTCCCGGGCTGGCTCCCCTATTCCGATCGCTTCCGCGTAGGAGCGTG TGTTTGTTTTCTTCGGAGGTTCGCGTGCGGCTCATTTCACACCGTGGGGA TGAGGCGTGTTTGATTGCTTGCGCGCCCCCATATCGTTGAGAGGCCGCGC CAAAGGCGTGGGCAGCAACGATACACCTGCCAGTATGTAAACGTAAAAGA TTTTTCTGCGAGTATGTAAAACGTATAAGAGCACCATTTAGACGGTCGGC GGAGGAGTACGGACGTGTGGGGCGTATAGAATTTCTGGGGCTTTCCCAGC GAGCAAAGGCGTCGTTGGTTTTCAGGTGTTAAGGCACTAAAAGCTGTAGT CGCAGGTGCTCGTGTAAGGCTGAAGGAGGGGGGTAACAGGACCGGCGGGA GTAGCAGGGCGGCATCCTCAAGAAGCCGGAAGAATATTGGGTATATTCAT TCGTTTCACCAGATATAGAACGCCATCGATAGCGTGTCTACGGGTCACAT TTGTTTTTTTTCGGCATATCTGGGTAACATGTTCCGCCGGCAAGGAGCAC ATTGTTCTCGGATTGGCGACAAAAAATGCTGATCCACGGAAGTTTTGATA TCGATGAGTCAACCCGAAAATGGCCGATAAGCTCTCGGGGATGCTAGACG TGTAGACGGGCGCGATGCGTGATTTGTCCCGAGCAATGTTGAGGCTCACT GCAACCAGACCGGTTGCACCACGGTCTGTAGTCTTTCGCAACCGAAATCA GACCGTTAGATGTCGGCGCTAACTGGTCTAATATATGGTTTACTCCGAGT GTCGTGGAGGGCCATCCGCCCGTTTCGGTCCTATTATGGTGCGAAAGCAA TCGGTCATGGGTAAAAGTAGTAGACCCTTGTGTAAGGCGGCATAAACAAG GCCGGTCGCCCTGTATGAGGTCGGTGTTATCACGCGAATCACATGGTCTC ATGCTTTGAATAGGGCCGGGTGTCCCGTGTAGGGCCCGTCAGTCCCTTGG CACTTTTCGACCTCTTAAACAGGGACCACTACTTGTTGGAAGTTGAAGAT CAACAACAACCTTCCGAAAAAACTGAACTCGACGGCAGACAAGAAGAAGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig151:27205..33354+

>mRNA_Ecto-sp13_S_contig151.3851.1 ID=mRNA_Ecto-sp13_S_contig151.3851.1|Name=mRNA_Ecto-sp13_S_contig151.3851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1932bp|location=Sequence derived from alignment at Ecto-sp13_S_contig151:27205..33354+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGAGCAACGTCAAGCCGTGCGTGGACCACCCCTCTTTCGTGTCCCA
CTGGGCGCCCAACCCGTCCACCGAGCGAGGGGACAACCTCGTCTTGGGTA
CGCACCCGAAGGAGTCCAAGATCATCTACCCGAGCGGAAAGTTCATCGTG
GTGAGGGACGTCAAGGATCCCACCGACGTGTTCGTCTACCGCGGCCATAA
CTCCAAGACAACGGTGGCAAAGTTCTCCCCGAACGGGTTCTGGGTGGCCT
CTGCGGACATCACCGGGAAGGTGCGGATTTGGGCGTGGGACAACCCGGAA
CACCAGCTCAAGATCGAGGTCTTCGGCCTGGGGGGCGCTATCAAGGATCT
CGCATGGGGCCCGGAGAGCAAGCGGATTGTGTGCTGCGGGGCGGGCTCCG
GGGTGAACGCTCGTGCGTTCATGTGGGACACCGGGAGCAACCTTGGGGAG
GTGGTGGGCCACAGCAAGCGGGTCATCAGCTGCGACTACAGACAGGTCCG
GCCGTACCGCATCATGACCGGGAGCGAGGATCACCGGACGATCTTTTACC
AGGGGCCGCCGTTCAAGATGGACCACTCCAACAACAACCAGCACACCAAC
TTCGTTAACTGCGTGCGGTTCAGCCCCGACGGCAGCAAGATTGCCACCTG
CTCCTCAGACAAGAAGGTGTGGCTGTACGACGGGAAGACGGGAGAGCCGC
TGTCCACCCTGGGCGAGGCAGCGGGCGCTCACGCGGGCTCGATCTACTCC
CTAGCCTGGAGCCCGGACTCTTCGTCCGTCGCGACCGCCTCCGCCGACAA
GACCGTCCGCCTCTTCGACGCGGCCTCGGGCGCTTGCACGCACACGTGGA
CCATCTCCGACTCCCCGGGGGTCGGGGACATGCAGGTGGCGGTGGCCTTC
TGCGGCGAGCAGCTAGTCTCGGTCTCCCTCAACGGCAACGTGAACATGCT
CGACGCCGGCTCCGAGCGGCCCCGCGACGTGTACCAGGCCCACCAGGGGG
CCATCACGGCGATGACCCGGAGCCCGGTGTCCGCGGGGGGCGGGGCCGCC
GCAGGCAAGATCTTGACGGGCTCCTTCACGGGGGTGCTGTGCGCGTGGGA
CCCGGCCACCGGCGGCGCGAAGCGGTGCACAGGAGGCAAGGCGGCCCCGG
TAACCGGCGCCGTGCACAGCAACAAGGTCACCGGCATCGCCGCCTGCTCG
GCAGGCGTCGTGTCCGTCGGCTGGGACGACACCTTGCGGCTCGCTCCTCT
CGACGGCGAAAGCGGCGGCGGCGGGGGGCCCGTCTTCACCGCGTCGGTCG
GGACGACCGGCCAGCCGTGCGGCGTCGCCGCGAACGCGGACTCCGACCTC
GTGGCCGTGGCCACCAACCAGGGTGTCACGCTCCTCCGCGGCACCACCCC
CGCCGTCGGCCTGTCGGCGACGTACACTCCGTCCTCGATCGCCATGGCCC
CCGGCGCCGGCGAGATCGCGGTCGGGTCCAAGGAGGGGAAGATCTACGTC
TACGAGACGGCCGGCGACGAGCTGAGGGAGACCAAGGTCGTGGACGGCCA
CCGCGGGGAGGTGACCTGCGTCGCGTACTCCCCCGACGGGACCCTCCTGG
CCGCCGGAGACGCCGCCCGCGAGGTCACGGTGTGGCGCGCGGGGGGAGAT
TGGGACGCCGATGTGCGGGGGCTGTGGCAGTTCCACACGGCGCGCGTGGC
GTGCCTGGCGTGGTCGCCGGAGGGAACGTACCTGGCGTCCGGCGGGCTCG
ACGAGAACGTGTTCGTGTGGAGCCCGGCCAAGCCGAGGCGCCGCGTTCAC
TACACGTTCGCGAACAAGGACGGCGTGGAAGGGCTGGCCTGGCTGTCGGA
CGGGGTCGTGGCCTCAGCGGGCGGGGACCACTGCGTGGCGACGTGGGACA
TCACCAAGGACATTTCCGTGTTCGACACCTGA
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