mRNA_Ecto-sp13_S_contig15063.3824.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A6H5K2C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C3_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.170e-87 Identity = 151/165 (91.52%), Postives = 158/165 (95.76%), Query Frame = 1
Query: 1 DATDENGDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRPGREGKVAASGVLGGAGIL 495
DAT E+GDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLE+Q+FLAWYMDWLFGEEESS DEWGEGDESSPNAVGRAPKDAGFAALV+ QAGGWKCAACLVSNA+A +KCASCE VRPG+E KV ASGVLGGAGIL
Sbjct: 656 DATGESGDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLERQAFLAWYMDWLFGEEESSHDEWGEGDESSPNAVGRAPKDAGFAALVRHQAGGWKCAACLVSNAKAVLKCASCEAVRPGQEDKVVASGVLGGAGIL 820
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: D8LRY5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY5_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.050e-85 Identity = 148/157 (94.27%), Postives = 153/157 (97.45%), Query Frame = 1
Query: 46 KAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRPGREGKVAASGVLGGAGILXXXSGAS 516
+AKAEKAFTEVDSAAKGWVEE QFEALMEAVGTTYAVEDHKPKLLAICT GRLE+QSFLAWYMDWLFG+EESSDDEWGEGDESSPNAVGRAPKDAGFA+LVKSQAGGWKCAACLVSNAEAA+KCASCETVRPGREGKVAASGVLGGAGIL X SGAS
Sbjct: 2234 RAKAEKAFTEVDSAAKGWVEEGQFEALMEAVGTTYAVEDHKPKLLAICTDGRLERQSFLAWYMDWLFGDEESSDDEWGEGDESSPNAVGRAPKDAGFASLVKSQAGGWKCAACLVSNAEAALKCASCETVRPGREGKVAASGVLGGAGILGXSSGAS 2390
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A6H5JYN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYN5_9PHAE) HSP 1 Score: 182 bits (462), Expect = 3.530e-56 Identity = 96/114 (84.21%), Postives = 100/114 (87.72%), Query Frame = -2
Query: 150 MPAPPNTPDAATLPSRPGLTVSHDAHFTAASALDTKHAAHFQPPAWLFTKAANPASFGARPTALGLLSSPSPHSSSDDSSSPNNQSMYHAKNDCFSNRPAVQIASSFGLWSSTA 491
MPAPPNTPDA TL S PGLT SHDAHF A A DTKHAAHFQPPAWL ++ ANPASFGARPTA GLLSSPSPHSS DDSSSPN+QSMYHAKN C SNRPAVQIA+SFGLWSSTA
Sbjct: 1 MPAPPNTPDATTLSSCPGLTASHDAHFNTALAFDTKHAAHFQPPAWLISRDANPASFGARPTASGLLSSPSPHSSCDDSSSPNSQSMYHAKNACLSNRPAVQIANSFGLWSSTA 114
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A7S4E7X3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 8.110e-21 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 1
Query: 1 DATDENGDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRP 441
DA+D++GDEEER EE+ A +AF V + K V S+F+ALMEA+GTTY E+H+ L + G + + +F+ WY+DW+ G+ +S P A +A A +A+L ++ G WKC C V N + A KCA+CET P
Sbjct: 115 DASDDSGDEEEREEERGNAREAFDTV-ADGKTEVPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA--ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 258
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A8J2SJ63_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ63_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.090e-20 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 1
Query: 1 DATDENGDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRP 441
DA+D++GDEEER EE+ A +AF V + K V S+F+ALMEA+GTTY E+H+ L + G + + +F+ WY+DW+ G+ +S P A +A A +A+L ++ G WKC C V N + A KCA+CET P
Sbjct: 955 DASDDSGDEEEREEERGNAREAFDTV-ADGKTEVPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA--ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNP 1098
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A7S4HSE8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HSE8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.860e-17 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 1
Query: 25 EEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTA-GRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNA---VGRAPKDAGFAALVKS---QAGGWKCAACLVSNAEAAVKCASCETVRPGRE---------GKVAASGVLGGAGI 492
EEE+ EE+ KA +AF + S + + + F L+E +GTTY E+H+ L + G++ K F+ WY+DWLFG+E+ ++ + DE P G + G+ KS + G WKC C+V N VKCA+CE VRPG E G AA+G +G G
Sbjct: 756 EEEKAEEREKALEAFASMSSDGEA-IPKEDFPKLIEGMGTTYCEEEHRRTLRKLAGPDGKVRKDEFVEWYLDWLFGDEDEDEEYSDKEDEEEPGEGTREGSVASNKGWGDAFKSTEGKEGSWKCDVCMVRNDPDLVKCAACEMVRPGHEEEANAKEGGGAGAAAGAIGAGGF 926
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A7R9W639_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W639_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.770e-17 Identity = 61/163 (37.42%), Postives = 91/163 (55.83%), Query Frame = 1
Query: 31 ERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNA--VGRAPKDAGFAALVKSQA---GGWKCAACLVSNAEAAVKCASCETVRPGREGKVAA---SGVLGGAGIL 495
E+ +E+ +A + F+ + S + + +F L+EA+GTTY E+H+ + I G++ + +F+ WY+DWLFGE E DDE+ E A +A K G+ KS G WKC CLV N ++KCA+CE V+PG E +VAA SG AG +
Sbjct: 121 EQADERNRAHEVFSSLSSDGDS-IPKEKFVDLIEAMGTTYCEEEHRRTIKKIAVEGKVHRDAFVEWYVDWLFGEGEE-DDEYSEXXXXXXXARDASKAAKQ-GWGDTFKSMGTKPGSWKCEFCLVQNDPDSIKCAACEAVKPGCEEEVAAKESSGAAASAGAI 280
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A7S3ZVY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.950e-17 Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 55 AEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRPGREGKVAASG 471
A +AF V A V S+F+ALMEA+GTTY E+H+ L + G + + +F+ WY+DW+ G+ +S P A +A A +A+L ++ G WKC C V N + A KCA+CET P K AASG
Sbjct: 131 AREAFDTVADGATS-VPSSKFQALMEALGTTYCEEEHRRTLRKLAPGGTVARDAFVEWYVDWVLGDGDSDXXXXXXXXXXXPAAESKAA--ATWASLTAAKEGSWKCEVCDVRNDKDASKCAACETPNPAAPQKAAASG 266
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A1Z5KBE2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBE2_FISSO) HSP 1 Score: 81.3 bits (199), Expect = 1.170e-14 Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 37 REEKAKAEKAFTEVDSAAKGW--VEESQFEALMEAVGTTYAVEDHKPKLLAIC-TAGRLEKQSFLAWYMDWLFGEEES----SDDEWGEGDESSPNAVGRAPKDAGFAALVKSQAGGWKCAACLVSNAEAAVKCASCETVRPG 444
REE+ +A+ F E+ S G + E F L+E++GTTY E+H+ + + ++G + + +F++WY+DWLFG +ES S++E E D N + G+ + K++ G WKC+ C+V N KC +CE VRPG
Sbjct: 770 REERERAQAKFQELSSIRNGVRSISEMDFPKLIESLGTTYCEEEHRRTIRKLKDSSGIITENAFVSWYIDWLFGGDESDVEDSEEEEDEVDGVVTNEL--VATGTGWGNIFKAEEGSWKCSVCMVLNPGETGKCKACEAVRPG 910
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Match: A0A3M6VIP6_9STRA (RanBP2-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIP6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.080e-13 Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 52 KAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYAVEDHKPKLLAICTAGRLEKQSFLAWYMDWLFGEEESSDDEWGEGDESSPN--AVGRAPKDAGFAAL-VKSQAGGWKCAACLVSNAEAAVKCASCETVRP 441
KA F + S ++ QF L++A+G+TYA E+H L + G++ + F++WY+DW+FG+++S D+ + SS A ++ +D A L + ++ G WKC C+VSN A+KC++CE P
Sbjct: 486 KARITFRTIVSDGSDFILSEQFPKLIKAMGSTYAEEEHAKTLENLEKDGKVYEADFVSWYVDWIFGDDDSDSDDNADTPASSATEPAEMKSKEDIAAAFLRLSAKEGSWKCGVCMVSNNPEAIKCSACEAPNP 618 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15063.3824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15063.3824.1 >prot_Ecto-sp13_S_contig15063.3824.1 ID=prot_Ecto-sp13_S_contig15063.3824.1|Name=mRNA_Ecto-sp13_S_contig15063.3824.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp DATDENGDEEERREEKAKAEKAFTEVDSAAKGWVEESQFEALMEAVGTTYback to top mRNA from alignment at Ecto-sp13_S_contig15063:3371..3904- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15063.3824.1 ID=mRNA_Ecto-sp13_S_contig15063.3824.1|Name=mRNA_Ecto-sp13_S_contig15063.3824.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=534bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15063:3371..3904- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15063:3371..3904- >mRNA_Ecto-sp13_S_contig15063.3824.1 ID=mRNA_Ecto-sp13_S_contig15063.3824.1|Name=mRNA_Ecto-sp13_S_contig15063.3824.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=534bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15063:3371..3904- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |