prot_Ecto-sp13_S_contig15020.3800.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15020.3800.1
Unique Nameprot_Ecto-sp13_S_contig15020.3800.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length937
Homology
BLAST of mRNA_Ecto-sp13_S_contig15020.3800.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE)

HSP 1 Score: 679 bits (1752), Expect = 4.900e-219
Identity = 602/902 (66.74%), Postives = 615/902 (68.18%), Query Frame = 0
Query:    4 AAHTFCCGLEEVPAGDWFCPACQARREEESRRREADSRRDAILQRVWAVDSGSEGQEQEQXXXXGVEEXTGRXXXXXPLESSGEEGVVTGAGAVGEGXXXXXXXXXXXXXXXXXXXXXXXXATAEAGAEAI----DGGGEVRESSPDLEAIGLGYSSGSTSSFNEEEEQEEFHGSDAEDGDARVGADPTETRGRTAVSSVSEGSSRPQPHSSTSLEARRRSGDGSEDGERLVSVLPGXXXXXXXXXXXXXXXXXXXXXNRSNGGAVGRSGRSRDGSGSXXXXXXAAPNFWPRVLASATSAMTPRHVFADDEDGEELASSEDEAGPPAGATGVVAQFWADAKLAQQVCECVYNTCGHSCPRYSARSCSAARTIQDFMSSQMLEDPVRGMCRECPCL--------GFADLRAIFVGRHGTRFHSISTVLERKFQPERRVFKRPRMMRTSQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PRLPAASDVRLGHSEVQALVQRLRRVARKERDRRSRGWAVGGSSARIGVSEGGGGVPNVPVEVEQTMEELRRVAVHGDATTLDVLLSTQ---------------------------------LPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQARIRRWSQLVFKTPRELPVSPFSPHNHASPMARRPAAVGSARAAGGAGAAGAGLTTAVRSHRARSLGGEMLSASXXXXXXXXXALPRRGTFQGTRGTPPXXXXXXXXXXXXXXXXXXXXXXXXXXARAVVRTIPRRHDVSGGTGGAGVKRTIPRLPPQDGDGARNGXXXXXXXXXXXLSSPTRHPARHRDHHREPASFSRDSASASRVP 858
            AAHTFCCGL EVPAGDWFCPACQARREEESRRREADSRRDAILQRVWAVDSGS+G E   XXXX    X   XXXXX                    XXXXXXXXXXXXXXXXXXXX    ATAEAGAEAI    D G EVRESS DLEAIGLGYSSGS S                                                H S S EARRRSGDGSED ERLVSVL GXXXXXXXXXXXXXXXXXXXXX      AVGRSGR RDGSGS      AAPNFWPRVLASATSAMTPRHVFAD+EDGEELASSEDEAGPPAGATGVVAQ WADAKLAQQ+ +          P  S +    A T +     Q  + PVRG                G A                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PRLPAASDVRLGH EVQALVQRLRRVA KER+RRSRGWAVGGS AR+GVSEGGGG P VP EVEQT+EELRRVAVHGDATTLDVLLS+Q                                 LPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAA PGETRDNRELIKQARIRRWSQLVFKTPRELPVSPFSPHNHASPM RRPAAVGSARAAGGAGA GAG TTAVR HRARSLGGEMLSAS    XXXXXALPR GTFQGTRGTPP    XXXXXXXXXXXXXXXXXXXXXX  AV+RTIPRR DVSGGTG  GVKRTIPRLP QDGDGAR+G           LSSP R            AS SRD ASAS VP
Sbjct:  691 AAHTFCCGLGEVPAGDWFCPACQARREEESRRREADSRRDAILQRVWAVDSGSDG-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITTAATAEAGAEAIAEAIDEGSEVRESSGDLEAIGLGYSSGSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXHGSASPEARRRSGDGSEDSERLVSVLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGRSGRRRDGSGSASAGA-AAPNFWPRVLASATSAMTPRHVFADEEDGEELASSEDEAGPPAGATGVVAQSWADAKLAQQLAQGTNKKKKGKAPSTSKQPPRTAMTTRT--QPQQQQQPVRGSVSNGQASPGSPVWNGGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRLPAASDVRLGHLEVQALVQRLRRVALKERERRSRGWAVGGS-ARMGVSEGGGGYPKVPSEVEQTIEELRRVAVHGDATTLDVLLSSQVGVSRRLNRLDASGSPALKLAVFGGGGCWWPSQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAAGPGETRDNRELIKQARIRRWSQLVFKTPRELPVSPFSPHNHASPMPRRPAAVGSARAAGGAGA-GAGWTTAVRCHRARSLGGEMLSASLSSPXXXXXALPRHGTFQGTRGTPPPRGKXXXXXXXXXXXXXXXXXXXXXXXXAVIRTIPRRRDVSGGTGXXGVKRTIPRLPSQDGDGARSGGGGRGGAATSSLSSPARXXXXXXXXXXXXASSSRDLASASLVP 1585          
BLAST of mRNA_Ecto-sp13_S_contig15020.3800.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 1.480e-191
Identity = 529/771 (68.61%), Postives = 544/771 (70.56%), Query Frame = 0
Query:    2 KQAAHTFCCGLEEVPAGDWFCPACQARREEESRRREADSRRDAILQRVWAVDSGSEGQEQEQXXXXGVEEXTGRXXXXXPLESSGEEGVVTGAGAVGEGXXXXXXXXXXXXXXXXXXXXXXXXA--TAEAGAEAIDGGGEVRESSPDLEAIGLGYSSGSTSSFNEEEEQEEFHGSDAEDGDARVGADPTETRGRTAVSSVSEGSSRPQPHSSTSLEARRRSGDGSEDGERLVSVLPGXXXXXXXXXXXXXXXXXXXXXNRSNGGAVGRSGRSRDGSGSXXXXXXAAPNFWPRVLASATSAMTPRHVFADDEDGEELASSEDEAGPPAGATGVVAQFWADAKLAQQVCECVYNTCGHSCPRYSARSCSAARTIQDFMSSQMLEDPVRGMCRECPCL--------GFADLRAIFVGRHGTRFHSISTVLERKFQPERRVFKRPRMMRTSQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLPAASDVRLGHSEVQALVQRLRRVARKERDRRSRGWAVGGSSARIGVSEGGGGVPNVPVEVEQTMEELRRVAVHGDATTLDVLLSTQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQARIRRWSQLVFKTPRELPVSPFSPHNHASPMARRPAAVGSARAAGGAGAAGAGL--------------TTAVRSHRARSLGGEMLSASXXXXXXXXXALPRRGTFQGTRGTPP 748
              AAHTFCCGLEEVPAGDWFCPACQARREEE+RRREADSRRDAILQRVWAVDSGSE +    XXXX    X   XXXXX                    XXXXXXXXXXXXXXXXXXXXXXXX   TA AGAEAID GGEVR SS DLEAIGLG SS                                    RTAV S  EGSSRP+PHSS S EARRRS DGSEDGERLVSVLPGXXXXXXXXXXXXXXXXXXXXX     GAVGRSGRS DGS  XXXXXX APNFWPRVLASATSAMTPRHVFAD+E G+ELASSEDEAGPPAGATGVVAQ WADAKLAQQ+ +          P  S +              Q  + PVRG                G                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PRLPAASDVRLGHSEVQALVQRLRRVA KER+RRSRGWAVGGSSAR GVSEGGGG P V VEVEQTM ELRRVAVHGDATTLDVLLS+QLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ  +RRWSQLVF+TPRELPVSPFSPHNHASP+ RRPAAV +AR AG                       TTAVRSHRARSLGGEML AS XXXXXX  ALPR GTFQGTRGTPP
Sbjct:  720 SNAAHTFCCGLEEVPAGDWFCPACQARREEEARRREADSRRDAILQRVWAVDSGSEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVTAGAGAEAIDEGGEVRVSSGDLEAIGLGDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RTAVGSGVEGSSRPRPHSSASPEARRRSSDGSEDGERLVSVLPGXXXXXXXXXXXXXXXXXXXXXXXXXXGAVGRSGRSHDGSX-XXXXXXXAPNFWPRVLASATSAMTPRHVFADEEYGQELASSEDEAGPPAGATGVVAQSWADAKLAQQLAQGKNKKDKSKAPSTSKQP--PRXXXXXXXXPQQRQQPVRGSVSNGQASVGSPVWNGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRLPAASDVRLGHSEVQALVQRLRRVALKERERRSRGWAVGGSSARTGVSEGGGGDPKVAVEVEQTMAELRRVAVHGDATTLDVLLSSQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQI-VRRWSQLVFRTPRELPVSPFSPHNHASPIPRRPAAVDTARYAGAXXXXXXXXXXXXXXXXXXXXXWTTAVRSHRARSLGGEMLWASSXXXXXXA-ALPRHGTFQGTRGTPP 1484          
BLAST of mRNA_Ecto-sp13_S_contig15020.3800.1 vs. uniprot
Match: A0A098VQT2_9MICR (TFIIS N-terminal domain-containing protein n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VQT2_9MICR)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-8
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
Query:  553 EVEQTMEELRRVAVHGDATTL-DVLLSTQLPTVLRLWLEVAPDGGPFLPPPQ-RASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQARIRRWSQLVF 660
            EV + +    R+ +      L D LL  ++   +RLWLE  PDG   LP    R S+L +L  LP++K HL+ESG+GK+V+ +   P ETR+N++L  +  I +WS+ + 
Sbjct:  117 EVLEKLSRFYRLLISNHRRDLIDYLLDNRILDAIRLWLEPYPDGS--LPSIDVRKSILHILAQLPIEKIHLKESGLGKVVMYLYKSPDETRENKKLAYKL-IDKWSRPII 223          
BLAST of mRNA_Ecto-sp13_S_contig15020.3800.1 vs. uniprot
Match: A0A1Y1WJ92_9FUNG (TFIIS N-terminal domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WJ92_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 7.280e-6
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 0
Query:  559 EELRRVAVHGDATTLDVLLSTQLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQARIRRWSQLVFK 661
            +ELR+  ++      +  L   +   LRLWLE   DG       Q A LL +L  LP+++ HLRESGIGK+++ M+  P     NR + +Q  ++RWS++V K
Sbjct:  167 DELRKTHLY------EAFLENNIVDSLRLWLEPLDDGSLPALDIQNA-LLDILGKLPIRRDHLRESGIGKIIMFMSKCPRIPERNRRVCEQF-VQRWSRMVMK 261          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15020.3800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6K9_9PHAE4.900e-21966.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVY3_ECTSI1.480e-19168.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A098VQT2_9MICR1.300e-837.27TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A1Y1WJ92_9FUNG7.280e-636.89TFIIS N-terminal domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 555..664
e-value: 6.6E-14
score: 53.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..40
e-value: 2.3E-6
score: 29.1
NoneNo IPR availablePANTHERPTHR47177FAMILY NOT NAMEDcoord: 4..219
NoneNo IPR availablePANTHERPTHR47177:SF4coord: 4..219
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 583..662
score: 9.332
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 4..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15020contigEcto-sp13_S_contig15020:77..4274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15020.3800.1mRNA_Ecto-sp13_S_contig15020.3800.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15020 77..4274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15020.3800.1 ID=prot_Ecto-sp13_S_contig15020.3800.1|Name=mRNA_Ecto-sp13_S_contig15020.3800.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=937bp
MKQAAHTFCCGLEEVPAGDWFCPACQARREEESRRREADSRRDAILQRVW
AVDSGSEGQEQEQENDDGVEEETGRGQQQQPLESSGEEGVVTGAGAVGEG
SSAAGGGRTRRAAAEAAAAAITTAATAEAGAEAIDGGGEVRESSPDLEAI
GLGYSSGSTSSFNEEEEQEEFHGSDAEDGDARVGADPTETRGRTAVSSVS
EGSSRPQPHSSTSLEARRRSGDGSEDGERLVSVLPGGGGVSGGAAAGGAS
SSSHRRGNRSNGGAVGRSGRSRDGSGSTAAAAAAAPNFWPRVLASATSAM
TPRHVFADDEDGEELASSEDEAGPPAGATGVVAQFWADAKLAQQVCECVY
NTCGHSCPRYSARSCSAARTIQDFMSSQMLEDPVRGMCRECPCLGFADLR
AIFVGRHGTRFHSISTVLERKFQPERRVFKRPRMMRTSQPPVLPPPPPPP
LTMSPATRYGGRTGGGGSVGGGGGVAARGRRRAGVSTTTTTPRLPAASDV
RLGHSEVQALVQRLRRVARKERDRRSRGWAVGGSSARIGVSEGGGGVPNV
PVEVEQTMEELRRVAVHGDATTLDVLLSTQLPTVLRLWLEVAPDGGPFLP
PPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQA
RIRRWSQLVFKTPRELPVSPFSPHNHASPMARRPAAVGSARAAGGAGAAG
AGLTTAVRSHRARSLGGEMLSASSSSSSPPPPALPRRGTFQGTRGTPPPR
GNKLGGGRNGGSSSSSATLRRAGGARAVVRTIPRRHDVSGGTGGAGVKRT
IPRLPPQDGDGARNGGGGGGGATTSSLSSPTRHPARHRDHHREPASFSRD
SASASRVPSTSSSSSSSSSATSSLPHHRQLNLGGNGGGASASRPPSSFSR
PASNGGVTPRPQQQRPQQQQQLYSSPPRYFPARAANA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035441TFIIS/LEDGF_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR017923TFIIS_N
IPR011011Znf_FYVE_PHD