prot_Ecto-sp13_S_contig14998.3782.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14998.3782.1
Unique Nameprot_Ecto-sp13_S_contig14998.3782.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: D7G781_ECTSI (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G781_ECTSI)

HSP 1 Score: 451 bits (1160), Expect = 2.770e-158
Identity = 232/254 (91.34%), Postives = 237/254 (93.31%), Query Frame = 0
Query:    1 MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            MWNAVWVLLLITYPPVLSFSFAGVALQ NKA +RRAARRV VETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF RTEEMFQHL+EP TAVNM+VFRAFGLL GCVTLRGDFKAIPDKPNFVKASFGPPLINFLGK GLTIRSGPKSSVRLAATYVDER+    LG      LF+F
Sbjct:    1 MWNAVWVLLLITYPPVLSFSFAGVALQSNKAAIRRAARRVSVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF-RTEEMFQHLVEPTTAVNMVVFRAFGLLKGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKRGLTIRSGPKSSVRLAATYVDERIR---LGMGGRGSLFVF 250          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A6H5JIG4_9PHAE (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG4_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 5.310e-157
Identity = 226/238 (94.96%), Postives = 230/238 (96.64%), Query Frame = 0
Query:    1 MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSR-TEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER 237
            MWNAVW+LLL TYPPVLSFSFAGVALQ NKAGVRRAA RVLVETAASSAEAGPPP IGGD PANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLF + TEEMFQHL+EPATAVNM+VFRAFGLL GCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER
Sbjct:    1 MWNAVWILLLTTYPPVLSFSFAGVALQSNKAGVRRAAPRVLVETAASSAEAGPPPPIGGDLPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFRQATEEMFQHLVEPATAVNMVVFRAFGLLKGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDER 238          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A7S2Y058_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y058_9STRA)

HSP 1 Score: 157 bits (396), Expect = 4.150e-42
Identity = 81/188 (43.09%), Postives = 117/188 (62.23%), Query Frame = 0
Query:   71 ELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSG--PSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAI--PDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            + +  +L  +  T+RGV  + EQ+ +IDG+++++  L  + D L+D R+FGNYNVAYVS+G  PSQ+GNPAGG +RG++GR  F +T  +FQHL+ P   +NM+ F+  G   GC TL G F+ I  PD PN V+A F PP +        T++ GP+S V L   YVD++V    +G      LFLF
Sbjct:  114 QAIEEILKIVPETDRGVLASEEQRTKIDGLLEKVENLNTNADTLSDERIFGNYNVAYVSTGKAPSQKGNPAGGGFRGKIGRKFF-QTTAVFQHLVAPNQVINMVQFKMLGRFPGCTTLMGTFEKINVPDLPNAVRAKFQPPRVTIGSSGKFTLQIGPQSQVTLGTPYVDDKVR---VGRGGRGSLFLF 297          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A7S3UXI2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXI2_HETAK)

HSP 1 Score: 150 bits (379), Expect = 5.330e-41
Identity = 83/182 (45.60%), Postives = 108/182 (59.34%), Query Frame = 0
Query:   73 VTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            V  LL  I GT+ G    P ++ EID +I+ L+  G  +  L    ++GNYNVAYVSSG SQRGNPAGGR+RG +G++LF RT  +FQHL+EP   VNM+ F+  G++ GC TL G F      PN V+A F PP + F      T+  GP S V L+  Y+D RV    LG      LF+F
Sbjct:   71 VDQLLELIRGTDAGSAVAPGKRAEIDALIEALSAAGGGQRNLARPEIYGNYNVAYVSSGGSQRGNPAGGRFRGALGKALF-RTTNLFQHLVEPNRVVNMVQFKLLGVVEGCTTLAGTFAPEGRDPNTVRARFQPPRVTFGRSGRCTLELGPPSEVVLSTPYLDGRVR---LGRGGRGSLFVF 248          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A383V4T8_TETOB (PAP_fibrillin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V4T8_TETOB)

HSP 1 Score: 147 bits (370), Expect = 1.880e-38
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 0
Query:   66 GSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDF----------KAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            G AAA++V+++L K++GT+ G+   PEQ++E+D +I QL   G  +    + +  +FGNYNVAY SSG  QRG PAGGR+RGR+GR LF +T  +FQ +L+P  A N + F+ FG+L G V LRG            +    + + V+  F PP+++ LG  GL  R GP SSV+L+  Y+DERV    LG      LF+F
Sbjct:   47 GPAAADIVSTILDKVQGTDGGISLQPEQKREVDALISQLEAAGRSQQPRPMQNPLLFGNYNVAYTSSGDDQRGQPAGGRFRGRLGRLLF-QTTGVFQSVLQPDIATNKVTFKLFGVLPGAVGLRGTVVPVQAGQPHGRGTAGEGDTVRVLFEPPVLS-LGS-GLHFRIGPPSSVQLSTPYLDERVR---LGRGSRGSLFVF 241          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: D8TNC6_VOLCA (PAP_fibrillin domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNC6_VOLCA)

HSP 1 Score: 137 bits (346), Expect = 7.270e-36
Identity = 89/213 (41.78%), Postives = 125/213 (58.69%), Query Frame = 0
Query:   45 AASSAEAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQR-GNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            AASSA   P PA     P++    A +LV  +L  IEGT+ G+  +P+ +  +D ++++L  LGA +    L++  ++GNYNVAY S G SQ  G PAGGR+RGR+GR+LF RT  +FQ +L+P  A N + FR FG L G V LRG      D  + V+  F PP+++   +  L ++ G  SSV L  TY+DERV    LG      LF+F
Sbjct:   59 AASSAAVSPAPAETVPQPSSSADEARQLVDQVLKTIEGTDSGLQISPQARAHVDALLERLEVLGAAQQPRPLDNPLLWGNYNVAYTSVGKSQEHGEPAGGRFRGRIGRALF-RTAGLFQSVLKPDLATNKVEFRLFGFLPGYVGLRGKVLPQGDTGDTVQVLFEPPMLSIANR--LHLKIGRFSSVVLTTTYLDERVR---LGRGSRGSLFVF 265          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A250WT81_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT81_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 1.280e-34
Identity = 79/187 (42.25%), Postives = 112/187 (59.89%), Query Frame = 0
Query:   72 LVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDWLNDSRVFGNYNVAYVSS--GPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLL--EPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            LV  ++ ++EGT+ G++ +  Q+ EID ++D+L   G     + D R+ GNY V Y S+   P Q+G  AGGR+RG +GRSLF +T  +FQ +L  +P  AVN + F   GL+ G V LRG  +   D    V   F PP+++F GK  L +R GPKSSV+LA TY+DER+    +G      LFLF
Sbjct:   47 LVDDIICRVEGTDGGINLSDAQKDEIDLLLDKLREAGKGSRPVKDPRLIGNYVVVYTSTRRAPGQKGQAAGGRFRGALGRSLF-KTTGVFQSVLAGDPPIAVNKVAFNLLGLIPGYVGLRGRVEPFGDDDESVSVYFDPPILSFAGK--LHLRIGPKSSVQLATTYLDERIR---VGLGSRGSLFLF 227          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A8J4AX21_9CHLO (PAP_fibrillin domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AX21_9CHLO)

HSP 1 Score: 134 bits (336), Expect = 2.530e-33
Identity = 81/189 (42.86%), Postives = 114/189 (60.32%), Query Frame = 0
Query:   69 AAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQ-RGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            A  +V  +L  IE T+ G+  +PE +  +D ++D+L TLG  +    L++  ++GNYNVAY S G SQ RG PAGGR+RGR+GR+LF RT  +FQ +L+P  A N + FR FG L G V LRG      D  + V+  F PP+++    + L ++ G  SSV L+ TY+DERV    LG      LF+F
Sbjct:   84 ARHIVDEVLEAIEATDSGLQISPEARTRVDSLLDRLETLGTTQQPRPLDNPLLWGNYNVAYTSVGRSQERGEPAGGRFRGRIGRALF-RTAGLFQSVLKPDIATNKVEFRLFGFLPGYVGLRGRVLPQGDNGDTVQVIFEPPVLSIA--NSLHLKIGKPSSVVLSTTYLDERVR---LGKGSRGSLFVF 266          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A835XUG7_9CHLO (PAP_fibrillin domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUG7_9CHLO)

HSP 1 Score: 134 bits (337), Expect = 3.930e-33
Identity = 80/188 (42.55%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   69 AAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            A  +V  +L  I  T+ G   +PE++ E+D +++QL  +GA +    L++  ++GNYNVAY SSG  Q G PAGGR+RGRVG++LF RT  +FQ +L+P  A N + F+ FG + G V LRG      D+ + V+  F PP++  +G+ GL +R G  SSV L+ TY+DERV    LG      LF+F
Sbjct:   58 ATAIVDRILESIRDTDSGAAISPEKRAEVDELLEQLEQIGAAQQPRPLDNPLLWGNYNVAYTSSGKGQYGEPAGGRFRGRVGKALF-RTAGLFQSVLQPDIATNKVEFKLFGFIPGFVGLRGKVLPEGDEGDTVQVLFEPPVLT-IGE-GLHLRIGRTSSVVLSTTYLDERVR---LGKGSRGSLFVF 239          
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Match: A0A2K3D377_CHLRE (PAP_fibrillin domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D377_CHLRE)

HSP 1 Score: 133 bits (334), Expect = 4.130e-33
Identity = 91/221 (41.18%), Postives = 128/221 (57.92%), Query Frame = 0
Query:   39 RVLVETAASSA--EAGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGIIDQLNTLGADKDW--LNDSRVFGNYNVAYVSSGPSQ-RGNPAGGRWRGRVGRSLFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFVKASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGXXXXGLFLF 254
            +V +E+ AS+A  +A P  A+       D   A  +V  +L  IEGT+ G+   P  +K +DG++D+L  LGA +    L+   ++GNYNVAY S G SQ RG PAGGR+RG++GR+LF RT  +FQ +L+P  A N + F+ FG+L G V LRG      D  + V+  F PP++    K  L I  G  SSV L+ TY+DER+    LG      LF+F
Sbjct:   51 KVALESPASNAATDAAPAAAVAHAAAPED---ARAIVDEVLKAIEGTDSGLSIDPATRKHVDGLLDKLEALGAAQQPRPLDSPLLWGNYNVAYTSVGRSQERGEPAGGRFRGKIGRALF-RTAGLFQSVLQPDIATNKVEFKLFGMLPGFVGLRGRVVPQGDAGDTVQVLFEPPVLAIADKLFLCI--GRTSSVVLSTTYLDERIR---LGKGSRGSLFVF 262          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14998.3782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G781_ECTSI2.770e-15891.34PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JIG4_9PHAE5.310e-15794.96PAP_fibrillin domain-containing protein (Fragment)... [more]
A0A7S2Y058_9STRA4.150e-4243.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UXI2_HETAK5.330e-4145.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A383V4T8_TETOB1.880e-3842.79PAP_fibrillin domain-containing protein n=1 Tax=Te... [more]
D8TNC6_VOLCA7.270e-3641.78PAP_fibrillin domain-containing protein (Fragment)... [more]
A0A250WT81_9CHLO1.280e-3442.25Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A8J4AX21_9CHLO2.530e-3342.86PAP_fibrillin domain-containing protein n=1 Tax=Vo... [more]
A0A835XUG7_9CHLO3.930e-3342.55PAP_fibrillin domain-containing protein n=1 Tax=Ed... [more]
A0A2K3D377_CHLRE4.130e-3341.18PAP_fibrillin domain-containing protein n=2 Tax=Ch... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 72..194
e-value: 4.6E-7
score: 30.0
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 56..254
NoneNo IPR availablePANTHERPTHR31906:SF25PLASTID-LIPID-ASSOCIATED PROTEIN 8, CHLOROPLASTIC-RELATEDcoord: 56..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.921
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14998contigEcto-sp13_S_contig14998:622..4226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14998.3782.1mRNA_Ecto-sp13_S_contig14998.3782.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14998 622..4226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14998.3782.1 ID=prot_Ecto-sp13_S_contig14998.3782.1|Name=mRNA_Ecto-sp13_S_contig14998.3782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MWNAVWVLLLITYPPVLSFSFAGVALQGNKAGVRRAARRVLVETAASSAE
AGPPPAIGGDGPANDGSAAAELVTSLLGKIEGTNRGVDCTPEQQKEIDGI
IDQLNTLGADKDWLNDSRVFGNYNVAYVSSGPSQRGNPAGGRWRGRVGRS
LFSRTEEMFQHLLEPATAVNMIVFRAFGLLTGCVTLRGDFKAIPDKPNFV
KASFGPPLINFLGKHGLTIRSGPKSSVRLAATYVDERVSARLLGGGGGGG
LFLF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP