mRNA_Ecto-sp13_S_contig14997.3781.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A6H5KN81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN81_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 4.830e-169 Identity = 312/327 (95.41%), Postives = 317/327 (96.94%), Query Frame = 1
Query: 1 MVTLLVGTTLALAVGVAAGIPLRNDLGNMSMAIDTPSSLARRYFNQGLRFTSTFKFDYAAESQLAALNEDPSCAMCEWGLALAYGQNLNDALVMSLEPWFLANEPLAFQAVRRAQALLLSAESEAERSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMHRRDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ 981
MVTLLVGTTLALA GVAAGIPLRNDLGNMSMAIDT SSLARRYFNQGLRFTSTFKFDYAAESQLAAL+EDP+CAMCEWGLALAYGQNLNDALVMSLEPWFLANEPLAFQAV+RA+ALLLSAESEAERS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAM RRDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMN+SPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ
Sbjct: 1 MVTLLVGTTLALAAGVAAGIPLRNDLGNMSMAIDTSSSLARRYFNQGLRFTSTFKFDYAAESQLAALDEDPACAMCEWGLALAYGQNLNDALVMSLEPWFLANEPLAFQAVQRAKALLLSAESEAERSRGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TAMRRRDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNISPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ 324
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: D8LR50_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR50_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.200e-28 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1
Query: 802 MRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ 981
MRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ
Sbjct: 1 MRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHLQ 60
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A7S2QLG8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QLG8_9DINO) HSP 1 Score: 102 bits (254), Expect = 3.670e-22 Identity = 56/136 (41.18%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 571 ALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
A+ L+L+F T EE FV P L +AYAE M A R +PD + L+LAA+ WM M PWDYW RP +A LLE + L+PD+ WA+H Y H+ E A + A+ A++L L+PG+PH+
Sbjct: 19 AITEGLTLRFARTAEE----FVARSP-QLRKAYAEHMDRVARR-----FPDDTLALVLAAEGWMAMHPWDYWTKLGAARPETSRAMELLEQTLRLEPDHGWAVHLYIHVTEASAISTHAIPYAEKLPGLIPGSPHI 144
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: UPI001CCC3894 (hypothetical protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CCC3894) HSP 1 Score: 100 bits (250), Expect = 6.200e-20 Identity = 90/317 (28.39%), Postives = 123/317 (38.80%), Query Frame = 1
Query: 40 VGVAAGIPLRNDLGNMSMAIDTPSSLARRYFNQGLRFTSTFKFDYAAESQLAALNEDPSCAMCEWGLALAYGQNLNDALVMSLEPWFLANEPLAFQAVRRAQALLLSAESEAERSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMHRRDLALVSALSLKF----VATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
+ +A G L +DLG+ + T S A+ +F+QGL F D AA S A+ DPSCAMC WG+A A G N N P+ R A + A+ A+ ++ALV+AL+ +F A EE E++ N+ YA M D A R +PD V +L A+A MN +PW W + V P R+ LE + D +P A HFY H +E AVA A RL L+PGA H+
Sbjct: 50 IALARGAILFDDLGDHRRKVTTQSPQAQAFFDQGLALLYGFNHDEAARSFARAVELDPSCAMCLWGVAYALGPNYNI--------------PMLPDRARAAWDAITRAQEHAQYGQPV---------------------------------------------------------EVALVAALARRFKGSEYAPPEEMEAY---------NRIYAGEMRDVARR-----FPDDLDVQVLFAEALMNANPWRLWSSEGVPAPGTREIVETLESVLARDESHPGANHFYIHAVEASPRPERAVAAADRLPGLMPGAGHI 281
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A1I2A7N9_9DELT (Uncharacterized protein n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2A7N9_9DELT) HSP 1 Score: 96.7 bits (239), Expect = 1.710e-18 Identity = 91/314 (28.98%), Postives = 118/314 (37.58%), Query Frame = 1
Query: 49 AAGIPLRNDLGNMSMAIDTPSSLARRYFNQGLRFTSTFKFDYAAESQLAALNEDPSCAMCEWGLALAYGQNLNDALVMSLEPWFLANEPLAFQAVRRAQALLLSAESEAERSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMHRRDLALVSALSLKF----VATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
A G L DLG+ + T S A+ +F+QGL F D AA S A+ DPSCAMC WG+A A G N N P A+ AV RAQ A+ + ALV+AL+ +F A E E++ N+ YA M D A R +PD V L A+A MN++PW W V P + LE + D +P A HFY H +E AVA A+RL L+PGA H+
Sbjct: 54 ARGAVLFGDLGDHERPVTTQSPQAQAFFDQGLNLLYGFNHDEAARSFARAVELDPSCAMCLWGVAYALGPNYNI-------PMLPDRAHAAWDAVTRAQ-------EHAQYGQPV---------------------------------------------------------EAALVAALARRFKGSEYAPPTEMEAY---------NRVYAVEMRDVARR-----FPDDLDVQALFAEALMNVNPWRLWSNDGVAAPGTLEIVETLESVLARDESHPGANHFYIHAVEASPRPERAVAAAERLAALMPGAGHM 282
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: UPI001EE37B84 (tetratricopeptide repeat protein n=1 Tax=Methylobacterium isbiliense TaxID=315478 RepID=UPI001EE37B84) HSP 1 Score: 86.7 bits (213), Expect = 4.280e-15 Identity = 55/119 (46.22%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 652 SLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKART--LLE--------DAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
+L+QAYAEAM AR +PD P V LL ADA MN++PWDYW+ P AR L+E D ++ PD+P AIH Y H +E AVA AQRLE L+PGA HL
Sbjct: 219 ALDQAYAEAMKAVQAR-----FPDSPDVALLTADALMNLTPWDYWDDGG-RTPKGETARMVELIEGVLGDRKLDGLVAAPDHPGAIHLYIHAVEASDRPERAVAHAQRLEALMPGAGHL 331
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A5D0GDP9_9FLAO (Uncharacterized protein n=1 Tax=Formosa maritima TaxID=2592046 RepID=A0A5D0GDP9_9FLAO) HSP 1 Score: 85.1 bits (209), Expect = 1.330e-14 Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1
Query: 547 TAMHRRDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
T ++ AL+++L+ ++ + LE+ S LN Y EAM + A E +P+ +L L A + MN PW+YW+ P+ +A+T LE AM+L PDNP A H+Y H++E+ + AV A +L L+PGA H+
Sbjct: 152 TNASEKEQALINSLTHRYSSDLEKETS--------DLNMEYMEAMTEVA-----EDYPEDSDILTLYAASIMNTVPWNYWDKEGNPSPHIAEAKTALEKAMVLSPDNPGAHHYYIHMVEL-PKPDLAVPSADKLGLLMPGAGHI 281
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A2K8WFE6_9RHOB (Uncharacterized protein n=1 Tax=Sagittula sp. P11 TaxID=2009329 RepID=A0A2K8WFE6_9RHOB) HSP 1 Score: 83.2 bits (204), Expect = 5.790e-14 Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 547 TAMHRRDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVM-RPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
TA + RD L A++L++ G A + A+A+AMAD AAR +PD V ++ ADA MN+ PWDYWE + + N + LE A+ +DP +P A+H Y H +E A+ G A L VP A HL
Sbjct: 142 TAANDRDRMLAEAVTLRYAVE---------GGTQADRDSAFADAMADVAAR-----FPDDANVQVIRADALMNLHPWDYWEADGIAPKGNGAEILAALERAIEIDPAHPAALHLYIHAVEASADPGQGEIAADLLRGSVPMAGHL 272
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: V4NPF0_9CAUL (Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 TaxID=1282362 RepID=V4NPF0_9CAUL) HSP 1 Score: 81.3 bits (199), Expect = 2.530e-13 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 562 RDLALVSALSLKFVATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPS-VMRPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
RD L+ AL++++ + H Q YA+A+ A+ R WP + +LAA+A M+++PWDYWE RP KA L+E + +PD+P AIH Y HL E A A A RL L P +PHL
Sbjct: 152 RDHVLLEALAVRYAPNPPKEAGHV-------FAQKYADALIAASER-----WPADDFIAILAAEAAMDVNPWDYWEAGGHAARPWGGKAMALVETVLKRNPDHPEAIHLYIHLTENSDNPRRAEAYADRLGALAPNSPHL 279
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Match: A0A0A0EE63_9RHOB (Uncharacterized protein n=1 Tax=Pseudooceanicola atlanticus TaxID=1461694 RepID=A0A0A0EE63_9RHOB) HSP 1 Score: 81.3 bits (199), Expect = 2.550e-13 Identity = 52/126 (41.27%), Postives = 66/126 (52.38%), Query Frame = 1
Query: 604 ATLEEYESHFVDGLPASLNQAYAEAMADAAARSEEEGWPDHPIVLLLAADAWMNMSPWDYWETPSVM-RPNARKARTLLEDAMLLDPDNPWAIHFYTHLMEVGAEAGAAVAPAQRLEYLVPGAPHL 978
A L+ Y D ASLN A+A AMAD AA +P+ V ++ ADA MN+ PWDYW+ V + N LE AM LDP +P A+H Y H +E ++ A A A L VP A HL
Sbjct: 154 ALLQRYAPRDADR--ASLNAAFANAMADVAAE-----FPEDANVQVIRADALMNLQPWDYWDADGVTPKGNGAAILATLERAMALDPAHPAALHLYIHAVEASSDPARAEAAADALRGSVPMAGHL 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14997.3781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14997.3781.1 >prot_Ecto-sp13_S_contig14997.3781.1 ID=prot_Ecto-sp13_S_contig14997.3781.1|Name=mRNA_Ecto-sp13_S_contig14997.3781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp MVTLLVGTTLALAVGVAAGIPLRNDLGNMSMAIDTPSSLARRYFNQGLRFback to top mRNA from alignment at Ecto-sp13_S_contig14997:64..3150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14997.3781.1 ID=mRNA_Ecto-sp13_S_contig14997.3781.1|Name=mRNA_Ecto-sp13_S_contig14997.3781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3087bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14997:64..3150- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14997:64..3150- >mRNA_Ecto-sp13_S_contig14997.3781.1 ID=mRNA_Ecto-sp13_S_contig14997.3781.1|Name=mRNA_Ecto-sp13_S_contig14997.3781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14997:64..3150- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |