mRNA_Ecto-sp13_S_contig14992.3778.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: D7FYC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC4_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 1.230e-139 Identity = 226/239 (94.56%), Postives = 230/239 (96.23%), Query Frame = 1
Query: 1 MGELVLAKFAGQAVVNIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLGDIADRLDDVPPSPAAAVPRAPAAGTSIGAPAKNVADVLKQAPTTVGQSTAVGAAAGGAGGALLAVVGAETLTAAAIANAALAGAVCTGIGGVAVGVGIVAYQAMNCAQPSQRSS 717
MGELVLAKFAGQAVVNI ELILECVDSIGSIVRGMKENNRHASQLLE+VEAIEPPIRAIQKKGTTLS SESLRQLLETVQEIRTVLD+YARTCIVARALKRKKIAKKFAWLGN+LTQKMHAVQLGDIADRLDDVPP+PAAAV RAPAA TSIG PAKNVADVLKQAPTTVGQSTAVGAAAGGAGGALLAVVGAETLTAAAIANAALAGAVCTGI GVAVGVGIVAYQAMN AQ SQ SS
Sbjct: 1 MGELVLAKFAGQAVVNIVELILECVDSIGSIVRGMKENNRHASQLLEIVEAIEPPIRAIQKKGTTLSGSESLRQLLETVQEIRTVLDEYARTCIVARALKRKKIAKKFAWLGNNLTQKMHAVQLGDIADRLDDVPPAPAAAVQRAPAARTSIGVPAKNVADVLKQAPTTVGQSTAVGAAAGGAGGALLAVVGAETLTAAAIANAALAGAVCTGIVGVAVGVGIVAYQAMNFAQSSQTSS 239
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: D8LQ15_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 4.210e-19 Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 43 VNIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLG---------DIADRLDDV 402
V++A +IL V I + G+ EN+R A +LL+ AIE P+ A+ GT LSSSESLRQL TV+ IR L+ YART + RALKRK A KF LG +LT+ MHA+QL D +DRL+D+
Sbjct: 2 VDVAVVILRVVAEIHDVAEGINENHRQARRLLKRAMAIETPVLAVHN-GTILSSSESLRQLSATVENIRNFLEGYARTTKLNRALKRKSNAAKFTQLGVNLTEGMHALQLDVAVDAWANEDASDRLEDL 129
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: A0A6H5JLJ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLJ5_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 7.160e-17 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 46 NIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLG---------DIADRLDDV 402
++A +L V I ++ +KEN+R A +L + V AIEPP+ A+ KKG+ +SSSESL +LL V+EIR L+ YART RALKRK A FA L LT+ M A+QL D +DRLDD+
Sbjct: 3 DVAVAVLRVVTEIRNVAERIKENDRQARRLSDRVTAIEPPVIAV-KKGSKMSSSESLHRLLFAVEEIRNFLEGYARTTNFNRALKRKANADSFAKLSVMLTEGMQALQLDIAVDAWATEDASDRLDDL 129
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 3.590e-15 Identity = 55/128 (42.97%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 46 NIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLG---------DIADRLDDV 402
++A ++L + I + +KEN+R A +L+E V+AIEP + A+ K+GT +SSSESLRQLL TV+ IR L YAR RALKRK A +F G + + + A+ L D ADRLDD+
Sbjct: 3 DVAVIVLGVMAQIRDFAKDIKENDRQACRLIERVKAIEPAVLAV-KQGTNMSSSESLRQLLGTVEMIRNFLGGYARMSNFNRALKRKSNASEFTQFGIHINEGVQALSLDIAVDAWAKEDAADRLDDL 129
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: D7G887_ECTSI (Protein kinase, TKL group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G887_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 2.090e-14 Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 46 NIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLG---------DIADRLDDV 402
++A ++L + I IV+ +KEN+R A +L+E V+AI+P + A+ K+GT SSS+SL QLL TV IR L+ YA+ RALKRK A +F G LT+ + + L D ADRLDD+
Sbjct: 3 DVAVIVLGVMAQIRDIVKDIKENDRQACRLIERVKAIQPAVLAV-KQGTNTSSSDSLSQLLATVDMIRNFLEGYAQMSKFNRALKRKANASEFTQFGVLLTEGVQTLSLDVAVDAWAKEDAADRLDDL 129
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 3.840e-13 Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 43 VNIAELILECVDSIGSIVRGMKENNRHASQLLEVVEAIEPPIRAIQKKGTTLSSSESLRQLLETVQEIRTVLDQYARTCIVARALKRKKIAKKFAWLGNSLTQKMHAVQLG---------DIADRLDDV 402
V++A ++L + + + + EN+R A +LL+ AIE P+ A+Q GT+L+S++SLRQLL TV++IR L++YAR RAL R+ A +F LG +LT+ M A+ L D +DR +D+
Sbjct: 2 VDVAVVVLRVLAEVRDVAEDVMENDRQACRLLKRALAIEAPVLAVQN-GTSLTSADSLRQLLTTVEKIRNFLEEYARMTKFNRALNRRSNAAEFMRLGLNLTEGMQALHLEVAVDVWAKEDASDRQEDI 129 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14992.3778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14992.3778.1 >prot_Ecto-sp13_S_contig14992.3778.1 ID=prot_Ecto-sp13_S_contig14992.3778.1|Name=mRNA_Ecto-sp13_S_contig14992.3778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp MGELVLAKFAGQAVVNIAELILECVDSIGSIVRGMKENNRHASQLLEVVEback to top mRNA from alignment at Ecto-sp13_S_contig14992:1522..2241- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14992.3778.1 ID=mRNA_Ecto-sp13_S_contig14992.3778.1|Name=mRNA_Ecto-sp13_S_contig14992.3778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=720bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14992:1522..2241- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14992:1522..2241- >mRNA_Ecto-sp13_S_contig14992.3778.1 ID=mRNA_Ecto-sp13_S_contig14992.3778.1|Name=mRNA_Ecto-sp13_S_contig14992.3778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=720bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14992:1522..2241- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |