mRNA_Ecto-sp13_S_contig1492.3743.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A6H5JKV4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV4_9PHAE) HSP 1 Score: 428 bits (1101), Expect = 2.580e-151 Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 1
Query: 52 MLNHADYGRTSEFVGQGGVGREVAPPTEMDADDKLENLTAEEEPGYGLGLPGLASLTLPSDGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
MLNHAD GRTSEFVGQGGVGREVAPPTEMDADDKLENLTAEEEPGYGLGLPGLASLTLPSDGMVVPPLNFSMVS GVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE
Sbjct: 1 MLNHADCGRTSEFVGQGGVGREVAPPTEMDADDKLENLTAEEEPGYGLGLPGLASLTLPSDGMVVPPLNFSMVSVGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 210
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A835YPN6_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN6_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.170e-67 Identity = 105/184 (57.07%), Postives = 136/184 (73.91%), Query Frame = 1
Query: 142 ADDKLENLTAEEEPGY----GLGLPGLASLTLPSDGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
ADD E T+ PG GLGL GLAS +LP GM++PPLN++MVS GV+RSGYPIACNF FL+ L L+++LCLCPES GSLEWAK SG ++ + + +N PFV M A+ +A+D ++D ++RP+LVHCLTGK++TGC +GCLRR Q W+L AIFDEY RF+ S LDMQFIEL++
Sbjct: 16 ADDTPEPATSGFPPGKPESEGLGLEGLASPSLPKQGMLIPPLNWAMVSPGVYRSGYPIACNFNFLKGLRLRTVLCLCPESCRRGSLEWAKSSGAALHLVSVSDNKEPFVWMDEQAVAQALDLIADPKSRPILVHCLTGKSRTGCVVGCLRRLQGWSLAAIFDEYLRFSAGSGSLLDMQFIELWD 199
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A2G9GM20_9LAMI (Protein-tyrosine-phosphatase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GM20_9LAMI) HSP 1 Score: 164 bits (415), Expect = 3.260e-47 Identity = 76/147 (51.70%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 241 VVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
+VPP+NFSMV G+FRSG+P NFPFL+ LGL+SI+ LCPE ++E+ KE+G+S+ + + PFVS+P +R A++ L D RNRP+L+HC GK +TGC +GCLR+ QNW L +I DEY RFA A+ DM+F+ELF+
Sbjct: 39 IVPPINFSMVDYGIFRSGFPDIPNFPFLKTLGLRSIIYLCPEPYPEANMEFVKENGISLFHFGVEGSKEPFVSIPEELIRCALEVLLDERNRPILIHCKRGKHRTGCLVGCLRKWQNWCLASILDEYQRFATDKARVSDMRFMELFD 185
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: L8H378_ACACA (Tyrosine specific protein phosphatase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H378_ACACA) HSP 1 Score: 162 bits (409), Expect = 1.110e-46 Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 238 MVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELF 678
+ +PPLNF+MV+ GV+RSGYP NFPFL+++GL+SIL LCPE+ +LE+ ++ G+ + + N PFV +P +R A+ L D RN PV++HC GK +TGC +GCLR+ Q W+L IFDEY RFAG + LD QFIELF
Sbjct: 12 LFIPPLNFAMVAPGVYRSGYPNKKNFPFLKKMGLKSILYLCPEAYPDENLEFLEKYGIKLLHFGINGNKEPFVEIPPHVIRNALVDLLDVRNHPVMIHCNKGKHRTGCLVGCLRKSQQWSLAYIFDEYRRFAGSKVRILDQQFIELF 158
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A2P2K1U8_RHIMU (Uncharacterized protein MANES_12G069200 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2K1U8_RHIMU) HSP 1 Score: 162 bits (411), Expect = 1.270e-46 Identity = 75/146 (51.37%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 244 VPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
+PPLNFSMV GVFRSG+P + NF FL+ LGL+SI+CLCPES ++E+ K +G+ + + PFV++P +R+A+ + D RN PVLVHC GK +TGC +GCLR+ Q W L +IFDEY RFA A+ D +FIELF+
Sbjct: 36 IPPLNFSMVDNGVFRSGFPDSANFSFLQTLGLRSIICLCPESYPEANMEFLKANGIKLFQFGIEGYKEPFVNIPDDTIREALKVVLDARNHPVLVHCKRGKHRTGCLVGCLRKLQRWYLSSIFDEYQRFAAAKARVSDQRFIELFD 181
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A6J1JK62_CUCMA (probable tyrosine-protein phosphatase At1g05000 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JK62_CUCMA) HSP 1 Score: 162 bits (411), Expect = 1.760e-46 Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 232 DGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
DG+ VPPLNF++V G+FRSG+P + NF FL+ LGL+SI+CLCPES S+++ K SG+ + + PFV++P +R+A+ + D RNRPVL+HC GK +TGC +GC R+ Q W L ++F EY RFA A+ D +FIELF+
Sbjct: 46 DGLFVPPLNFAVVDNGIFRSGFPDSSNFYFLQTLGLRSIICLCPESYPEASMDFLKSSGIRLFQLGIEGTKEPFVNIPDNTIREALKTILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFYEYQRFAAAKARVSDQRFIELFD 195
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: UPI001C502702 (probable tyrosine-protein phosphatase DSP4 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001C502702) HSP 1 Score: 162 bits (410), Expect = 4.230e-46 Identity = 82/192 (42.71%), Postives = 119/192 (61.98%), Query Frame = 1
Query: 106 VGREVAPPTEMDADDKLENLTAEEEPGYGLGLPGLASLTLPSDGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
VGRE+ E+ D++LE L E + +P +A + + VPPLNFSMV G+FRSG+P NF FL+ LGL+SI+CLCPE + E+ K +G+ + + PFV++P +R+A+ + D RN P+L+HC GK +TGC +GCLR+ Q W L ++FDEY RFA A+ D +F+ELF+
Sbjct: 6 VGREMCIANEITVDEELE-LKLEMISEAKIPVP-VAETDRDGEELFVPPLNFSMVDNGIFRSGFPDTANFSFLQTLGLRSIICLCPEPYPDPNTEFLKSNGIRLFQFGIEGYKEPFVNIPEDMIREALKVVLDVRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLSSVFDEYQRFAAAKARVSDQRFMELFD 195
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: UPI001C4E66E5 (probable tyrosine-protein phosphatase DSP4 isoform X1 n=3 Tax=Proteaceae TaxID=4328 RepID=UPI001C4E66E5) HSP 1 Score: 163 bits (413), Expect = 4.650e-46 Identity = 82/192 (42.71%), Postives = 119/192 (61.98%), Query Frame = 1
Query: 106 VGREVAPPTEMDADDKLENLTAEEEPGYGLGLPGLASLTLPSDGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
VG+E+ E+ D++LE L E E P +A + + M VPPLNF+MV GVFRSG+P NF FL+ LGL+SI+CLCPE + E+ K +G+ + + PFV++P +R+A+ + D RN P+L+HC GK +TGC +GCLR+ Q W L ++FDEY R+A A+ D +F+ELF+
Sbjct: 41 VGKEMCRANEVAVDEELE-LIPESEIS-----PTVAEIDRDGEDMFVPPLNFAMVDNGVFRSGFPDTANFSFLQTLGLRSIICLCPEPYPDPNTEFLKSNGIRLFQFGIEGYKEPFVNIPEDMIREALKVVLDVRNHPLLIHCKRGKHRTGCLVGCLRKLQRWCLSSVFDEYQRYAAAKARVSDQRFMELFD 226
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A0K9R786_SPIOL (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9R786_SPIOL) HSP 1 Score: 162 bits (409), Expect = 6.900e-46 Identity = 75/147 (51.02%), Postives = 104/147 (70.75%), Query Frame = 1
Query: 241 VVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
+VPPLNFS V GVFRSG+P NFPFL+ LGL+SI+ LCPE+ +LE+ K++G+ + + + PFV++P A+R+A+ + D RN PVL+HC GK +TGC +GCLR+ + W L +IFDEY RFAG A+ D +FIELF+
Sbjct: 70 LVPPLNFSFVDNGVFRSGFPEPPNFPFLQSLGLRSIIYLCPEAYPETNLEFIKKNGIKLYKFGIEGHKEPFVNIPDKAIREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCLRKLEKWCLSSIFDEYQRFAGGKARVSDQRFIELFD 216
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Match: A0A2R6X497_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X497_MARPO) HSP 1 Score: 160 bits (405), Expect = 1.140e-45 Identity = 72/150 (48.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 232 DGMVVPPLNFSMVSEGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 681
D +++PPLNF+MV +GV+RSGYP + NF FL +L L+S++ LCPE +LE+ K+ +++ + N PFV +P +R A+ L D +N P+L+HC GK +TGC +GCLR+ QNW+L +IFDEY RFAG + LD QF+ELF+
Sbjct: 5 DDLLIPPLNFAMVDQGVYRSGYPNSKNFTFLHKLRLRSVIYLCPEPYPESNLEFLKKDNITLFHFGIEGNKEPFVDIPEDVIRDALKILLDVKNHPILIHCNKGKHRTGCLVGCLRKVQNWSLTSIFDEYRRFAGTKVRMLDQQFMELFD 154 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1492.3743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1492.3743.1 >prot_Ecto-sp13_S_contig1492.3743.1 ID=prot_Ecto-sp13_S_contig1492.3743.1|Name=mRNA_Ecto-sp13_S_contig1492.3743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp MLNHADYGRTSEFVGQGGVGREVAPPTEMDADDKLENLTAEEEPGYGLGLback to top mRNA from alignment at Ecto-sp13_S_contig1492:4203..6485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1492.3743.1 ID=mRNA_Ecto-sp13_S_contig1492.3743.1|Name=mRNA_Ecto-sp13_S_contig1492.3743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2283bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1492:4203..6485- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1492:4203..6485- >mRNA_Ecto-sp13_S_contig1492.3743.1 ID=mRNA_Ecto-sp13_S_contig1492.3743.1|Name=mRNA_Ecto-sp13_S_contig1492.3743.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=633bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1492:4203..6485- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |