mRNA_Ecto-sp13_S_contig14909.3734.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 1.570e-179 Identity = 264/299 (88.29%), Postives = 279/299 (93.31%), Query Frame = 1
Query: 1 SDTPLPHGGNQEEELEERTTSAGDKCRYGWYMMGAAVFLSLVAALALSGSLGGTPPIATTTLEEFQRXXXXXXXXXXXXXXXXXXXXXXSLSGETSGQGVPAIELGEELPTQSPKSKDEKKSDESTEPPESWRGGGGPFGLDGDWRNALQEEGGDGAENGLRGEACMTHEKRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTSITLFDALNKHESTCCALV 897
++TP PHGGNQEEELEE TTSAG+ C+YGWYMMGAAVFLSLVAA+ALSGSLG TPPIA TTLEEFQR XXXXXXXXXXXXX SLSGE SGQGVP +ELGEELPTQSP+SKDEKKSD+STEPPESW+G GGPFG+DGDWRNALQE+GGDGAENGLRGEACMTHE RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDE+SIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRR AQMEPLNRCLRHYINRK+DDP+NAPSWLLFHD DEYVYPRDTS+TLFDALNKHESTCCALV
Sbjct: 2 AETPRPHGGNQEEELEEYTTSAGNNCQYGWYMMGAAVFLSLVAAVALSGSLGETPPIAATTLEEFQRRKAWDEGAXXXXXXXXXXXXXRSLSGEASGQGVPTVELGEELPTQSPQSKDEKKSDDSTEPPESWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALV 300
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE) HSP 1 Score: 212 bits (539), Expect = 2.230e-61 Identity = 107/191 (56.02%), Postives = 128/191 (67.02%), Query Frame = 1
Query: 394 WRGGGGPFGLDGDWRNALQEEGGD-----GAENGLRGE-ACMTHEKRKEV-----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTSITLFDALNKHESTCCALV 897
WRG GG FGL DWR AL GG GA GLRG AC+ +K+ EV AVCLRTKD+ RFLPEW+AFHYA+GVDEI IYDD+S D T EVL+PFV AGIVRYIF++I R QM+PLN CL ++ R+ ++A +W+LFHDTDEY+YP DTS+ + DAL KH TCCALV
Sbjct: 149 WRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALV 339
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE) HSP 1 Score: 191 bits (485), Expect = 2.220e-54 Identity = 96/187 (51.34%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 385 PESWRGGGGPFGLDGDWRNALQEEGGDGAENGLRGEACMTHEKRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTSITLFDALNKHESTCCALV 897
P W G GG FGL DWR A G G E +RG++CM K+++V A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV AGIV YI + QM PLN CL ++ R+ D + AP WLLFHDTDEYV P DTS+T+ AL+KH +TCC V
Sbjct: 76 PYPWTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNE-APRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRV 261
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI) HSP 1 Score: 181 bits (460), Expect = 7.420e-52 Identity = 81/126 (64.29%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 520 EVAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTSITLFDALNKHESTCCALV 897
+VA+CLRTKD+ RFLPEW+AFHYA+GVDEI IYDD+S D T EVL PFV AGIVRYIF++I R QM+PLN CL + R+ ++A +W+LFHDTDEY+YP DTS+ + DAL KH TCCALV
Sbjct: 2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALV 127
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.690e-25 Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 517 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSE----VLKPFVSAGIVRYIFDMI-PRRA------AQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTS-ITLFDALNKHESTCCALV 897
++V C RTKD GR+LPEWVA+H+A+GVDE++I+DD+SVD T E VL+PFV AGIV++ I PR A A M PL C+ Y + + AP W++ DTDEY++ R+ I L +AL +TCC V
Sbjct: 249 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQV 387
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: R5PZS6_9PROT (Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5PZS6_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 2.010e-13 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 523 VAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVYPRDTSITLFDALNKHESTC 885
+++C K+ +LPEW+ F+ +GV++ IYD+ S D T EVLKP++ G V Y + P +A Q+ N ++ Y +N WL F D DE+V P T T+ + L +E C
Sbjct: 17 LSLCAIVKNEAPYLPEWIEFYKLVGVEKFYIYDNESSDNTKEVLKPYIDTGDVVYTYQ--PGQAQQLVAYNDAVKKY--------KNETKWLGFFDLDEFVMPLSTK-TIPEFLKDYEEEC 126
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: D7G8H9_ECTSI (VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H9_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 9.630e-13 Identity = 58/75 (77.33%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 94 MMGAAVFLSLVAALALSGSLGGTPPIATTTLEEFQRXXXXXXXXXXXXXXXXXXXXXXSLSGETSGQGVPAIELG 318
MMGAAVFLSLVAA+ALSGSLG TPPIA TTLEEFQR XXXXXXXXXXXXX SLSGE SGQGVP ++ G
Sbjct: 1 MMGAAVFLSLVAAVALSGSLGETPPIAATTLEEFQRRKAWDEGAXXXXXXXXXXXXXRSLSGEASGQGVPTMDTG 75
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: A0A1V5QNH7_9ARCH (Glycosyl transferase family 2 n=1 Tax=archaeon ADurb.Bin336 TaxID=1866922 RepID=A0A1V5QNH7_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 1.110e-12 Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 523 VAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCLRHYINRKEDDPQNAPSWLLFHDTDEYVY 828
+++C KD G +L EW+ FH +GV+ IYD+NS D T ++L+P+++ + Y F P Q+E N CL++Y + W+ F D DE++Y
Sbjct: 69 LSICAIIKDEGPYLQEWIEFHKLVGVEHFYIYDNNSTDNTKQILQPYINDKTITYTF--WPMHPGQIEAYNDCLKNYGKESK--------WIAFIDLDEFLY 160
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: D8LG84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG84_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.580e-11 Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 517 KEVAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEV 651
++V C RTKD GR+LPEWVA+H+A+GVDE++I+DD+SVD T EV
Sbjct: 63 EQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREV 107
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Match: A0A7U3SQ81_9SPHI (Glycosyltransferase family 92 protein n=1 Tax=Pedobacter endophyticus TaxID=2789740 RepID=A0A7U3SQ81_9SPHI) HSP 1 Score: 74.3 bits (181), Expect = 1.670e-11 Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 523 VAVCLRTKDYGRFLPEWVAFHYAIGVDEISIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRAAQMEPLNRCL-RHYINRKEDDPQNAPSWLLFHDTDEYVYP-RDTSITLF 855
+AVC K+ G + EW+ +H +GV++ IYD+ S D T ++L+P++S+G+V Y + P Q+ + CL +H ++ + W+ F D DE+++P +D+SI F
Sbjct: 86 LAVCAIAKNEGPYFEEWIEWHRKLGVEKFYIYDNESTDNTRQILEPYISSGMVEYT--LWPGMKQQLMAYDNCLEKHRLDAR---------WIAFIDLDEFIFPVKDSSIPRF 187 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14909.3734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14909.3734.1 >prot_Ecto-sp13_S_contig14909.3734.1 ID=prot_Ecto-sp13_S_contig14909.3734.1|Name=mRNA_Ecto-sp13_S_contig14909.3734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp SDTPLPHGGNQEEELEERTTSAGDKCRYGWYMMGAAVFLSLVAALALSGSback to top mRNA from alignment at Ecto-sp13_S_contig14909:153..2845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14909.3734.1 ID=mRNA_Ecto-sp13_S_contig14909.3734.1|Name=mRNA_Ecto-sp13_S_contig14909.3734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2693bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14909:153..2845- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14909:153..2845- >mRNA_Ecto-sp13_S_contig14909.3734.1 ID=mRNA_Ecto-sp13_S_contig14909.3734.1|Name=mRNA_Ecto-sp13_S_contig14909.3734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14909:153..2845- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |