mRNA_Ecto-sp13_S_contig149.3728.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A6H5KJ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ68_9PHAE) HSP 1 Score: 1386 bits (3588), Expect = 0.000e+0 Identity = 921/1104 (83.42%), Postives = 946/1104 (85.69%), Query Frame = 1
Query: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLD----------ELRLAKEDKQLEGQDPSRSVGNTNDDDELWRGDDSATAEVEREERREALEEEARCLREELAAVKARAEEAVASINQELEEAVCARESASSAAAAAQGELVEEKARAAAAERQLKGATEEAAQLRTRLHDTTTELESARIALKTDGSNRFGKSTDNGDDDEDAADLESEASYLQFSHTLLKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNELQEELDSTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAATLAAMSSQLAESTEELERLRERLKDVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEARQLAVTREEESSTAQXXXXXXXXXXXXXXXXXSNAAALAAEAXXXXXXXXXXXXXXXXXXXXXTSEALSRATELETTLRETEAGRKSLLDTAASNAKKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXVALKETMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRLEIKNEEALSASKGLREECEGLTATVETLRAAAVAAAGDGGNKLXXXXXXXXXXXXXXXXXXXXXXEITRLRAVIEEMKRAGGEVGVARGSTGDASSHNGRDPDDGGSDEEERDGARRHGQGGASTKQHIMAERDSLRAELASEKEQAAVRAAGLETQLADKERXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMVGRGGGRLRAGGGSVASPKSTGRDPASIGADVGGAVGGILRGNFWSGWGGGSVTSADTTGGGSTGDAGAGKGPAAAVRKGSKARREGGRGDGEGKISAGAAGAGEADQQSISRVRENIMARLQEAAREGKAEQKETSGGADGVKNKDVGDADTDNSGSQGAXXXXXXXTRSDVKDVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTLTSPDSRSKETALWDLRVKVDLNG 3282
MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVL+ ELRLAKEDKQLEGQDPSRSVGNTNDDD WRGDDS AEVEREERRE LEEEARCLREELAAVKARAEEAVASINQELEEAVCARESA SAAAAAQGELV+EKARAAAAERQLKGATEEAAQLRTRL+DTTTELESAR AL+TDG+NR GKST+NGDDDEDAA LK IRD ITAQPPSSPARTEGQEAVRPVASEDAVASALEKVN+LQEEL+STVRDNVE+RRLIENTRQREEEENQHRLVQEGEAAA LAAMSSQLAESTEELE LRERLK+VEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEARQL VTREEESSTAQ XXXXXXXXXXXXXXXXSNAAALAAEA XXXXXX XXXXXXTSEALSR ELETTLRETEAGR+SLLDTAAS+AKKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXX TMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRL+IKNEEALSAS GLREECE L ATVETLRAAAVAAAGDGGNKL E RLRAV+EEMKR G EVGV RG GD SSH+GRDPDD GSDEEE DGARRHG+G ASTK+ I+AERDSLRAELASEKE XXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDAS RR PSSSATSMVGRGGGRLRAGGGSVASPKSTGRDPASIGA+VGGAVGGILRG FWSGWGGGSVTSADT GGGSTGDAG KISAGAAGAGEADQ+SISRVREN+MARLQEAAREGKAEQKETSGGADGVKNKDVG A+T+NSG QGA TRS+ KDVSDVGMAAAPRTVEDEWVEE VEHPPPDYGLESPVIRYLLQQWS DPDK+KYLSLWLRCVIERRKVP AFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGT PD SKETALWDLRVKVDLNG
Sbjct: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLNVRVIRFFVAAELRLAKEDKQLEGQDPSRSVGNTNDDDAPWRGDDSGIAEVEREERRETLEEEARCLREELAAVKARAEEAVASINQELEEAVCARESACSAAAAAQGELVQEKARAAAAERQLKGATEEAAQLRTRLNDTTTELESARNALETDGTNRVGKSTNNGDDDEDAA---------------LKLIRDAITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQEELESTVRDNVELRRLIENTRQREEEENQHRLVQEGEAAAALAAMSSQLAESTEELEGLRERLKNVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEARQLVVTREEESSTAQRXXXXXXXXXXXXXXXXSNAAALAAEAEEGRAXXXXXXTVVLXXXXXXTSEALSRVKELETTLRETEAGRESLLDTAASDAKKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRLKIKNEEALSASNGLREECEVLKATVETLRAAAVAAAGDGGNKLNDVSTAVATQTDEAEENEEKEGEFARLRAVVEEMKRGGDEVGVVRGCVGDVSSHDGRDPDDSGSDEEEGDGARRHGKGRASTKRQILAERDSLRAELASEKEXXXXXXXXXXXXXXXXXXXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASLRRIPSSSATSMVGRGGGRLRAGGGSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSADTNGGGSTGDAGXXXXXXXXXXXXXXXXXXXXXXXXXXKISAGAAGAGEADQRSISRVRENMMARLQEAAREGKAEQKETSGGADGVKNKDVGHANTNNSGLQGASGNNMEETRSENKDVSDVGMAAAPRTVEDEWVEENVEHPPPDYGLESPVIRYLLQQWSTDPDKIKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTPAYPDGHSKETALWDLRVKVDLNG 1089
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: D8LFB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB2_ECTSI) HSP 1 Score: 1045 bits (2701), Expect = 0.000e+0 Identity = 750/1094 (68.56%), Postives = 766/1094 (70.02%), Query Frame = 1
Query: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLDELRLAKEDKQLEGQDPSRSVGNTNDDDELWRGDDSATAEVEREERREALEEEARCLREELAAVKARAEEAVASINQELEEAVCARESASSAAAAAQGELVEEKARAAAAERQLKGATEEAAQLRTRLHDTTTELESARIALKTDGSNRFGKSTDNGDDDEDAADLESEASYLQFSHTLLKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNELQEELDSTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAATLAAMSSQLAESTEELERLRERLKDVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEARQLAVTREEESSTAQXXXXXXXXXXXXXXXXXSNAAALAAEAXXXXXXXXXXXXXXXXXXXXXTSEALSRATELETTLRETEAGRKSLLDTAASNAKKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXVALKETMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRLEIKNEEALSASKGLREECEGLTATVETLRAAAVAAAGDGGNKLXXXXXXXXXXXXXXXXXXXXXXEITRLRAVIEEMKRAGGEVGVARGSTGDASSHNGRDPDDGGSDEEERDGARRHGQGGASTKQHIMAERDSLRAELASEKEQAAVRAAGLETQLADKERXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMVGRGGGRLRAGGGSVASPKSTGRDPASIGADVGGAVGGILRGNFWSGWGGGSVTSADTTGGGSTGDAGAGKGPAAAVRKGSKARREGGRGDGEGKISAGAAGAGEADQQSISRVRENIMARLQEAAREGKAEQKETSGGADGVKNKDVGDADTDNSGSQGAXXXXXXXTRSDVKDVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTLTSPDSRSKETALWDLRVKVDLNG 3282
MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVL+ELRLAKE KQ EGQDPSRSVGN NDDD RGD+S TAEVEREE RE LEEEARCLREELAAVKARAE LKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVN+LQEEL+STVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAA LAAMSSQLAESTEELE LRERLK VEQEEARI+ASCSE VSALEA+EGEVASLGASLAHTTEALEEA+QLAVTREEESS AQ XXXXXXXXXXXXXXXX ALAAEA XXXXXXXXX TSEALSR TELETTLRETEAGRKSLLD AAS+A+KIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXX ETM EAEKAHKVAVEKEVEARL VEETLLMANK +MAERDSLRAELASEKEQA++RAAGLETQLADKER DTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSM GRGGGRLRAGGGSVASPKSTGRDPASIGA+ ILRG FWSGWGGGSVTSADT GGGSTG+AGAGK REGGRG GEGKIS GAAGAGEAD QSISRVREN+MARLQEAAREGK EQKETSGGA GVKNKDVG A+TDNSGSQGA T SDVK VSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWS DPDKLKYLSLWLRCVIERRKVP AFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEES PAGAGT TSPDS SKETALWDLRVKVDLNG
Sbjct: 1 MSLKDAVSALRSLKXXXXXXXXXXXXXXVAYRGVLNELRLAKEPKQKEGQDPSRSVGNNNDDDAPRRGDESGTAEVEREEWRETLEEEARCLREELAAVKARAE--------------------------------------------------------------------------------------------------------------LKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQEELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAANLAAMSSQLAESTEELEGLRERLKGVEQEEARIKASCSENVSALEASEGEVASLGASLAHTTEALEEAQQLAVTREEESSNAQRXXXXXXXXXXXXXXXXXXXXALAAEAEEGXXXXXXXXXVVLERERAATSEALSRVTELETTLRETEAGRKSLLDAAASDAEKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXETMVEAEKAHKVAVEKEVEARLGVEETLLMANK-------------------------------------------------------------------------------------------------------------------------------------VMAERDSLRAELASEKEQASMRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGRLRAGGGSVASPKSTGRDPASIGAEXXXXXXXILRGKFWSGWGGGSVTSADTNGGGSTGEAGAGKXXXXXXXXXXXXXREGGRGYGEGKISTGAAGAGEADHQSISRVRENMMARLQEAAREGKVEQKETSGGAGGVKNKDVGGANTDNSGSQGASGENKEETGSDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESIPAGAGTPTSPDSHSKETALWDLRVKVDLNG 851
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A7S2DMV1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMV1_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.470e-22 Identity = 43/84 (51.19%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 2893 WVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGG 3144
W +E+ HP P +G+E PVI++LL W++DP KL+Y+SLWL + +++ FP+GLQLV L PEIKDGFLTL++P++R + G
Sbjct: 32 WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRG 115
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A7S2DLI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI1_9STRA) HSP 1 Score: 104 bits (259), Expect = 9.920e-22 Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 2893 WVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSR 3168
W +E+ HP P +G+E PVI++LL W++DP KL+Y+SLWL + +++ FP+GLQLV L PEIKDGFLTL++P++R + G V V R
Sbjct: 32 WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRGSRVSVKVR 123
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A7S2SI89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI89_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.930e-19 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 2893 WVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIER---RKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIR 3132
W ET ++P P +G+ SPVI++LL W++DP KL+Y+SLWL +I VP +FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 203 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 285
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A7S2SIB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIB0_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.870e-18 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 2893 WVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIER---RKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIR 3132
W ET ++P P +G+ SPVI++LL W++DP KL+Y+SLWL +I VP +FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 655 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 737
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A662Y4D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D6_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.350e-16 Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 2893 WVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWL-RCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 3171
W EE V HP P + L+SP + YLL W+A+ K++YL WL + V+ R +P+ FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 298 WQEELVRHPTPHFDLDSPEVTYLLHAWTANVKKMQYLRRWLTQVVVTRGPLPADFPMGVELPRLPPEVRDGFLTLVVPLLRRQTEREILAHSRR 391
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A484ECE1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECE1_BRELC) HSP 1 Score: 91.3 bits (225), Expect = 7.170e-16 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 1
Query: 2878 TVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERR-KVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 3171
TV +W EE V HP P + L SP + YLL+ W+ D K +YL WL V++ + +P AFP ++L L+PE++DGFLTLV+P++R +L H R+
Sbjct: 236 TVNSKWFEELVRHPTPHFDLNSPEVAYLLRAWTIDMKKWRYLRRWLLQVVQTKGPLPDAFPMAVELPRLSPEVRDGFLTLVLPLLRKQTERDILAHCRK 334
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A0W8DHJ6_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DHJ6_PHYNI) HSP 1 Score: 91.7 bits (226), Expect = 7.320e-16 Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 2857 GMAAAPR---TVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWLRCVIERR-KVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 3171
G A AP +V +W EE V HP P + LESP + Y+L+ W+ + K++YL WL V++ + +P FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 251 GRARAPADADSVNPKWHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTKGPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQQTEREILAHSRR 359
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Match: A0A8K1C2V5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2V5_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 1.050e-15 Identity = 42/98 (42.86%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 2881 VEDEWVEETVEHPPPDYGLESPVIRYLLQQWSADPDKLKYLSLWL-RCVIERRKVPSAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 3171
+E W E+ + HP P + L+SP ++YLLQ W+ + KL+Y+ WL V+E +P FP G++L L PEI+DGFLTLV+P++R + VH+R+
Sbjct: 267 IEFAWQEDLIRHPTPHFDLDSPEVQYLLQSWTQNIKKLQYIRTWLTHVVVETADLPDDFPMGIELPRLLPEIRDGFLTLVVPLLRKQTRREIQVHTRQ 364 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig149.3728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig149.3728.1 >prot_Ecto-sp13_S_contig149.3728.1 ID=prot_Ecto-sp13_S_contig149.3728.1|Name=mRNA_Ecto-sp13_S_contig149.3728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1095bp MSLKDAVSALRSLKAELEACRSSKAELEVAYRGVLDELRLAKEDKQLEGQback to top mRNA from alignment at Ecto-sp13_S_contig149:13023..21173+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig149.3728.1 ID=mRNA_Ecto-sp13_S_contig149.3728.1|Name=mRNA_Ecto-sp13_S_contig149.3728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8151bp|location=Sequence derived from alignment at Ecto-sp13_S_contig149:13023..21173+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig149:13023..21173+ >mRNA_Ecto-sp13_S_contig149.3728.1 ID=mRNA_Ecto-sp13_S_contig149.3728.1|Name=mRNA_Ecto-sp13_S_contig149.3728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig149:13023..21173+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |