prot_Ecto-sp13_S_contig14874.3710.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14874.3710.1
Unique Nameprot_Ecto-sp13_S_contig14874.3710.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A6H5JRM9_9PHAE (Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRM9_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.410e-68
Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0
Query:   47 MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVF LFTFHVEATD+VAELI AVKAKGM VGVALKPATPVE
Sbjct:    1 MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFPLFTFHVEATDKVAELIAAVKAKGMRVGVALKPATPVE 114          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A835Z9Z5_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z5_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.540e-51
Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVER--QGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            H  P  IGPSVLA+DMSRL EES ++ +  +  DY+HLDVMDGHFVPNLTFGAPVIK LRKHTKA LDAHLMVS PAQWVDDMA AGVDR      TFH+EAT++ A LI  VK +GM VG+ALKP TP +
Sbjct:    1 HHLPVGIGPSVLASDMSRLAEESAEIAQHFKEHDYLHLDVMDGHFVPNLTFGAPVIKSLRKHTKATLDAHLMVSDPAQWVDDMADAGVDR-----LTFHIEATEDPAALIRRVKGRGMKVGIALKPKTPAD 126          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A7S0MF64_9CRYP (Ribulose-phosphate 3-epimerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MF64_9CRYP)

HSP 1 Score: 157 bits (396), Expect = 3.790e-45
Identity = 78/131 (59.54%), Postives = 97/131 (74.05%), Query Frame = 0
Query:   30 RFHSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            + H RP AI PS+LA D++ L  E+  V  +  DY+HLDVMDGHFVPNL++GAPV+K LR H+KA  D HLMVS PA+WV DMA AG D     +FTFH+EATD+ A LI A+KA GM VG+A+KP TPV+
Sbjct:    4 KMHVRPPAILPSLLACDLANLAHEANRVAPEKTDYVHLDVMDGHFVPNLSWGAPVVKCLRPHSKAFFDVHLMVSEPAKWVKDMAEAGAD-----MFTFHIEATDDAAGLIKAIKAAGMKVGIAIKPKTPVD 129          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A0D2WU07_CAPO3 (Ribulose-phosphate 3-epimerase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WU07_CAPO3)

HSP 1 Score: 152 bits (383), Expect = 2.840e-43
Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 0
Query:   31 FHSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            FH     IGPSVLA+DMS L  E+  V   GADY+HLDVMDGHFVPN+T GAPVIK LRKH+KA  D H+MVS P QWVDDMA AG D+     FTFH+E+T +   LI  ++AK M VGVA+KP TP E
Sbjct:    3 FHKCNCRIGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSKAFFDLHMMVSKPEQWVDDMADAGGDQ-----FTFHLESTADPMALIRQIRAKNMKVGVAIKPNTPAE 127          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A1Y1Z982_9FUNG (Ribulose-phosphate 3-epimerase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z982_9FUNG)

HSP 1 Score: 150 bits (380), Expect = 5.580e-43
Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 0
Query:   36 AAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATP 158
            A I PS+L+ D ++L E+   +   GADY+H+DVMDGHFVPNLT GAP+IK LRKHTKA LD HLMVSHP QWV+D A AG D     +FTFH+EAT +   LI +V+  GM VG+ALKP TP
Sbjct:    4 AKIAPSLLSGDFAKLAEDCQYMVECGADYLHMDVMDGHFVPNLTLGAPIIKSLRKHTKAFLDCHLMVSHPEQWVEDFANAGAD-----MFTFHIEATQDAPALIESVRKTGMKVGIALKPKTP 121          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A485KVB4_9STRA (Ribulose-phosphate 3-epimerase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KVB4_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.040e-42
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            HS    IGPS+LA+D+S L +E+L V   GADY+HLDVMDGHFVPN+T+GAPVIK LR+HTKA  D H+MVS P +WVDD+  AG D+     FTFH+E+T     LI  ++A GM VGVALKP T VE
Sbjct:    3 HSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQHTKAFFDVHMMVSEPEKWVDDIKDAGGDQ-----FTFHLESTKNPEALIQQIRATGMKVGVALKPGTAVE 126          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A024U095_9STRA (Ribulose-phosphate 3-epimerase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U095_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.040e-42
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            HS    IGPS+LA+D+S L +E+L V   GADY+HLDVMDGHFVPN+T+GAPVIK LRKHT A  D H+MVS P +WVDD+  AG D+     FTFH+E+T +   LI  ++A GM VGVALKP T VE
Sbjct:    3 HSCVCKIGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTTAFFDVHMMVSEPEKWVDDIKDAGGDQ-----FTFHLESTSDPEALIRQIRAAGMKVGVALKPGTAVE 126          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A7S2XXF9_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXF9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.230e-42
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTK--ALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            H+R A I PSVLA D+SRL +ES  V   GAD +HLDVMDGHFVPNLTFG+PVI  LRK     ALLD HLMV++P +WV+DMA AG D      FTFHVEA  + AE I AVKA GM VG+ALKP TPVE
Sbjct:   52 HARSANIAPSVLACDLSRLAQESQRVLDAGADSVHLDVMDGHFVPNLTFGSPVIACLRKQVPRPALLDVHLMVTYPHKWVEDMAKAGAD-----CFTFHVEAEGQHAETIRAVKAAGMKVGLALKPGTPVE 177          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: M4C3P1_HYAAE (Ribulose-phosphate 3-epimerase n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4C3P1_HYAAE)

HSP 1 Score: 147 bits (372), Expect = 1.370e-41
Identity = 76/129 (58.91%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            HS    IGPS+LA+D+SRL +ESL V   GADY+HLDVMDGHFVPN+++G PVIK LR HTKA  D H+MVS P QWV D+AAAG D+     FTFH+EAT +   LI  +++ GM VG+A+KP T  E
Sbjct:    3 HSCTCKIGPSLLASDLSRLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKAFFDCHMMVSKPEQWVLDVAAAGGDQ-----FTFHLEATLDPEALIEQIRSAGMKVGLAIKPGTSAE 126          
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Match: A0A5D6YAI9_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAI9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.990e-41
Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 0
Query:   32 HSRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVGVALKPATPVE 160
            HS    IGPS+LA+D+S L +E+  V   GADY+HLDVMDGHFVPN+T+GAPVIK LR HT A  D H+MV+ P QWVDD+A AG ++     FTFH+EAT     LI  ++A GM VGVA+KP TPVE
Sbjct:    3 HSCVCKIGPSMLASDLSCLRDEARKVVAAGADYLHLDVMDGHFVPNITWGAPVIKALRPHTDAFFDCHMMVAKPEQWVDDIADAGGNQ-----FTFHLEATTAPLALIEQIRAAGMKVGVAIKPGTPVE 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14874.3710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRM9_9PHAE1.410e-6896.49Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus ... [more]
A0A835Z9Z5_9STRA3.540e-5168.70Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema m... [more]
A0A7S0MF64_9CRYP3.790e-4559.54Ribulose-phosphate 3-epimerase n=1 Tax=Cryptomonas... [more]
A0A0D2WU07_CAPO32.840e-4361.54Ribulose-phosphate 3-epimerase n=1 Tax=Capsaspora ... [more]
A0A1Y1Z982_9FUNG5.580e-4360.16Ribulose-phosphate 3-epimerase n=1 Tax=Basidiobolu... [more]
A0A485KVB4_9STRA2.040e-4259.69Ribulose-phosphate 3-epimerase n=8 Tax=Saprolegnia... [more]
A0A024U095_9STRA2.040e-4259.69Ribulose-phosphate 3-epimerase n=2 Tax=Saprolegnia... [more]
A0A7S2XXF9_9STRA7.230e-4264.12Ribulose-phosphate 3-epimerase n=1 Tax=Fibrocapsa ... [more]
M4C3P1_HYAAE1.370e-4158.91Ribulose-phosphate 3-epimerase n=26 Tax=Peronospor... [more]
A0A5D6YAI9_9STRA1.990e-4158.91Ribulose-phosphate 3-epimerase n=1 Tax=Pythium bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 32..160
e-value: 4.1E-44
score: 152.3
IPR000056Ribulose-phosphate 3-epimerase-likePFAMPF00834Ribul_P_3_epimcoord: 38..160
e-value: 1.1E-36
score: 126.1
IPR000056Ribulose-phosphate 3-epimerase-likePANTHERPTHR11749RIBULOSE-5-PHOSPHATE-3-EPIMERASEcoord: 36..160
IPR000056Ribulose-phosphate 3-epimerase-likePROSITEPS01085RIBUL_P_3_EPIMER_1coord: 65..79
NoneNo IPR availablePANTHERPTHR11749:SF3RIBULOSE-PHOSPHATE 3-EPIMERASEcoord: 36..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..160
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.623
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 36..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14874contigEcto-sp13_S_contig14874:1770..4286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14874.3710.1mRNA_Ecto-sp13_S_contig14874.3710.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14874 1770..4286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14874.3710.1 ID=prot_Ecto-sp13_S_contig14874.3710.1|Name=mRNA_Ecto-sp13_S_contig14874.3710.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
MRRGFAGCSSWTALYILGVAAGTTSIMGERFHSRPAAIGPSVLAADMSRL
MEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHL
MVSHPAQWVDDMAAAGVDRRVFLLFTFHVEATDEVAELIVAVKAKGMGVG
VALKPATPVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000056Ribul_P_3_epim-like
IPR011060RibuloseP-bd_barrel