mRNA_Ecto-sp13_S_contig14861.3704.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14861.3704.1
Unique NamemRNA_Ecto-sp13_S_contig14861.3704.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE)

HSP 1 Score: 634 bits (1636), Expect = 8.710e-211
Identity = 396/520 (76.15%), Postives = 407/520 (78.27%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMHGGNEAEGGDGGDDQ-----------------------TLRGWIDSPGTAAAATSVATGSDKFLSVRPALHNWQQQXXXXXXXPSTAPQSSSPFSSGKSSNVNFEATEPLGGRRGGDAGVSSSTTPTELHNRSVSGNTISSPNGSTTNRSATPAAVFRDREEAHHPSLEEDLITFPRFKPHALMQPTLFSTDDPARGVSFHDGGILSGGDREQXXXXXXXXXXXXXXXGEALKRAGVGGAKLLNAWEKIEELEGLVESSRSHNQRLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSGALVQRPLTERQGPDDEIATEVLARTTQELEELRCENAELRKQMLA 1491
            IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDD                 L+EDALDMRTQQLFHLQKALVMHGGN AEGG+ GDDQ                       TL GWIDSPG  AAAT VA GSDKFLSVRPALHN QQ XXXXXXX          FSSGKSSNVNFEA EPLGGRR GDAGVSSSTTPTELH RSVSGNTI SPNGSTT  SATPAAVF  REEAH+P LEE+LI+FPRFKPHALMQPTLFSTDDPA GVSFHDGGILS  D EQ      XXXXXXX  GEALKRAGVGGAKLLNAWEKIEELEGLVESSRSHN+RLL+DLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQ      I    +DG+   A                 +  AL QRPLTERQGP+DEIATEVLARTTQELEELRCENAELRKQMLA
Sbjct:  804 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDA----------------LIEDALDMRTQQLFHLQKALVMHGGNGAEGGNVGDDQVCAAASDASTIPGHSGRSNLDRRTLDGWIDSPGATAAATKVAAGSDKFLSVRPALHNRQQXXXXXXXXXXXXXXXXXSFSSGKSSNVNFEAPEPLGGRRCGDAGVSSSTTPTELHYRSVSGNTIFSPNGSTTKGSATPAAVFGGREEAHNPPLEEELISFPRFKPHALMQPTLFSTDDPAGGVSFHDGGILSREDGEQGGEGDRXXXXXXXGRGEALKRAGVGGAKLLNAWEKIEELEGLVESSRSHNERLLKDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQI-----ICGVLIDGVLEHA-----------------QHSALTQRPLTERQGPEDEIATEVLARTTQELEELRCENAELRKQMLA 1285          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: D7FRU7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU7_ECTSI)

HSP 1 Score: 554 bits (1427), Expect = 2.620e-191
Identity = 326/367 (88.83%), Postives = 331/367 (90.19%), Query Frame = 1
Query:  391 MHGGNEAEGGDGGDDQTLRGWIDSPGTAAAATSVATGSDKFLSVRPALHNWQQQXXXXXXXPSTAPQSSSPFSSGKSSNVNFEATEPLGGRRGGDAGVSSSTTPTELHNRSVSGNTISSPNGSTTNRSATPAAVFRDREEAHHPSLEEDLITFPRFKPHALMQPTLFSTDDPARGVSFHDGGILSGGDREQXXXXXXXXXXXXXXXGEALKRAGVGGAKLLNAWEKIEELEGLVESSRSHNQRLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSGALVQRPLTERQGPDDEIATEVLARTTQELEELRCENAELRKQMLA 1491
            M+GGN AEGGD GDDQ  RGWIDSPG AAAATSVATGSDKFLSVRP LHNWQQ XXXXXXX          FSSGKSSNVNFEA EP GGRRGGDAGVSSSTTPTELHNRSVSGNTISSPNGSTTN SATPAAVF  REEAHH   EEDLITFPRFKPHALMQPTLFSTDDPA G SFHDGGILSGGD EQXXXXXXXXXXX     EALKRAG GGAKLLNAWEKIEELEGLVESSRSHN+RLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKS AL QRPLTERQGPDDE+ATEVLARTTQELEELRCENAELRKQ+L+
Sbjct:    1 MYGGNGAEGGDSGDDQKSRGWIDSPGAAAAATSVATGSDKFLSVRPVLHNWQQXXXXXXXXXXXXXXXX--FSSGKSSNVNFEAPEPTGGRRGGDAGVSSSTTPTELHNRSVSGNTISSPNGSTTNGSATPAAVFGGREEAHHSPFEEDLITFPRFKPHALMQPTLFSTDDPAGGGSFHDGGILSGGDGEQXXXXXXXXXXXGAGRVEALKRAGAGGAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSSALAQRPLTERQGPDDEVATEVLARTTQELEELRCENAELRKQILS 365          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: D7FRU8_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU8_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 8.510e-43
Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVI 282
            ++ERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGG EGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDD +
Sbjct:  216 LEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGTEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDAV 309          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A0P1ARB4_PLAHL (Kinesin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARB4_PLAHL)

HSP 1 Score: 121 bits (303), Expect = 2.230e-25
Identity = 86/191 (45.03%), Postives = 112/191 (58.64%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRS--DGGAEGVD-----------------------YADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMHGGNEAEGGDGGDDQTLRGWIDSPGTAAAATSVAT 498
            ++ERSLEF REKEEK+ LE RI+ LT QM+   +R    G  EG +                       Y  RLADLE+ER TIE EK QV+RYK LL+KQRDIMIALTQRLNERD+ I AL DEL+A + +Q+ +E+ LD +T  L HLQ+  + H  N     D    + L  W  +  T  A+ S+++
Sbjct:  602 LEERSLEFMREKEEKKRLEQRISALTSQMLMSSQRRLIPGATEGEETLNVEDPLIKDALKEHQDRIRQEYECRLADLEKERETIEEEKAQVDRYKLLLLKQRDIMIALTQRLNERDEQITALQDELDAYDRYQKELEEKLDEKTAHLIHLQRVAMEHNANSPGKIDSELLKALGDWGGALRTTTASDSISS 792          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A024T9G2_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9G2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.030e-25
Identity = 80/166 (48.19%), Postives = 100/166 (60.24%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMI-----GRGRRSDGGAEGV-----------------------------DYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMH 396
            +++RSLEF  EKEEK+ LE RI MLT QM+      +G   DG +                                +Y  RLADLE+ER TIE EK QV+RYKQLL+KQRDIMIALTQRLNERD+ I AL DEL+A + HQ+ +E+ LD +T QL HLQ+  + H
Sbjct:  456 LEQRSLEFMLEKEEKKKLEQRIIMLTSQMLMSHGKQKGANDDGSSXXXXXXXGENEFSTEDPQFRIALKEQQDRIRKEYECRLADLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLNERDEQIMALQDELDAYDRHQKSLEEKLDEKTAQLIHLQRVTMEH 621          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A5A8DDM3_CAFRO (Kinesin motor domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDM3_CAFRO)

HSP 1 Score: 115 bits (287), Expect = 2.390e-23
Identity = 87/202 (43.07%), Postives = 112/202 (55.45%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVD-------------------YADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMHGGN---------EAEGGDGGDDQTLRGWIDSPGTA--AAATSVATGSDKFL 516
            ++ RS EF REKEEK+ LEGRI+ L GQM+        G EGV                    Y  +L +LE+ER ++E EK QV+RYKQLL+KQRDIMI LTQRLNERDD I AL DEL+A + HQ  +E+ LD +T  L HLQ+  + H  +         EA G   G  ++  G +  P  A  A A     G D++L
Sbjct:  573 LEARSREFLREKEEKKRLEGRISALQGQMLT-------GGEGVTDTPAFRNALKEHQEKIRAKYDAKLHELEKERESMEEEKAQVDRYKQLLLKQRDIMILLTQRLNERDDQIVALQDELDAYDRHQRELEEKLDEKTAALIHLQRVALEHNTSSPFKSRALAEALGAWSGGQESSEG-MPHPAAASIAGAAEPEAGPDRYL 766          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A7S0XUM8_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XUM8_HEMAN)

HSP 1 Score: 107 bits (267), Expect = 2.790e-23
Identity = 66/142 (46.48%), Postives = 93/142 (65.49%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGA----------EGV--DYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALV 390
            ++ERS EF +EK EKR LE R+  ++ Q+I  G+  +  A          E +  +Y  +L DLERER  +  +K Q++RYKQLL+KQRDIMIALT RLNERD++I  L +E++A + HQ  +EDALD +T  L HLQ+  +
Sbjct:   44 LEERSREFMKEKAEKRKLEQRLHSMSSQLIAGGKEQETTAAMRSALRTEHEKIHGEYVRKLEDLERERQVLSEDKSQIDRYKQLLLKQRDIMIALTARLNERDEMIMRLQEEVDAYDRHQRDLEDALDQKTASLIHLQRVAL 185          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A5A8D575_CAFRO (Kinesin-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D575_CAFRO)

HSP 1 Score: 114 bits (285), Expect = 3.130e-23
Identity = 75/151 (49.67%), Postives = 94/151 (62.25%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVD-------------------YADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMH 396
            ++ RS EF REKEEK+ LEGRI+ L GQM+        G EGV                    Y  +L +LE+ER ++E EK QV+RYKQLL+KQRDIMI LTQRLNERDD I AL DEL+A + HQ  +E+ LD +T  L HLQ+  + H
Sbjct:  573 LEARSREFLREKEEKKRLEGRISALQGQMLT-------GGEGVTDTPAFRNALKEHQEKIRAKYDAKLHELEKERESMEEEKAQVDRYKQLLLKQRDIMILLTQRLNERDDQIVALQDELDAYDRHQRELEEKLDEKTAALIHLQRVALEH 716          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A7S3HBF7_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBF7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.500e-23
Identity = 80/152 (52.63%), Postives = 95/152 (62.50%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGV-------------------------DYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQK 381
            ++ RSLEF  EKEEK+ LE RIAML GQMI RG RS  G EG                          +Y  +LADLERER TIE EK QV+RYKQLL+KQRDIMIALTQRL ERD+ I AL DEL+A + H + +E+ LD +T  L   Q+
Sbjct:  481 LEARSLEFMHEKEEKKKLEQRIAMLMGQMI-RGDRS--GVEGTPGRGDGEVHPEVHTMMKEQQEKLTKEYEFKLADLERERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLVERDEQIMALQDELDAYDSHHKELEEKLDEKTAMLIKFQR 629          
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Match: A0A6A3NJV1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NJV1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.460e-23
Identity = 129/436 (29.59%), Postives = 174/436 (39.91%), Query Frame = 1
Query:    1 IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRR----SDGGAEG------------------------VDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDELEASEIHQELMEDALDMRTQQLFHLQKALVMHGGNEAEGGDGGDDQTLRGWIDSPGTAAAATSVATGS-DKFLSVRPALHNWQQQXXXXXXXPSTAPQSSSPFSSGKSSNVNFEATEPLGGRRGGDAGVSSSTTPTELHNRSVSGNTISSPNGSTTNRSATPAAVFRDREEAHHPSLEEDLITFPRFKPHALMQPTLFSTDDPARGVSFHDGGILSGGDREQXXXXXXXXXXXXXXXGEALKRAGVGGAKLLNAWEKIEELEGLVESSRSHNQRLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEAR 1221
            ++ERS EF REKEEK+ LE RI+ LT QM+   +R    S GG  G                         +Y  RLADLE+ER TIE EK QV+RYKQLL+KQRDIMIALTQRLNERD+ I                       +T  L HLQ+  + H  +                  SPG   A    A G      +  P +H                                     P+G  R  +       TP EL                                          LIT  +F+PH +  P + + ++ +   S H G                                  GGA LL+A EKI+EL  LV++  + +QR+  +LE+V+++KVS+E+L+REKL++LVQ E+EAR
Sbjct:  341 LEERSREFMREKEEKKRLEQRISALTSQMLMSNQRRLTPSAGGGLGDGEVLNVEDPLIRDAIKEHQDRIRQEYECRLADLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLNERDEQITXXXXXXXXXXXXXXXXXXXXXEKTAHLIHLQRVAMEHNAS------------------SPGKIDAELLKALGDWGGGTAQTPMMH-------------------------------------PVGSNRVAE-------TPAEL------------------------------------------LITHKQFRPHPV-DPVIINDNNYSNNNSLHTGS---------------------------------GGASLLSADEKIQELRALVDAQSAEHQRMARELEDVKSEKVSVEFLMREKLDKLVQVELEAR 638          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14861.3704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9W7_9PHAE8.710e-21176.15Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D7FRU7_ECTSI2.620e-19188.83Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FRU8_ECTSI8.510e-4394.68Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A0P1ARB4_PLAHL2.230e-2545.03Kinesin-like protein n=1 Tax=Plasmopara halstedii ... [more]
A0A024T9G2_9STRA5.030e-2548.19Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A5A8DDM3_CAFRO2.390e-2343.07Kinesin motor domain-containing protein n=3 Tax=Ca... [more]
A0A7S0XUM8_HEMAN2.790e-2346.48Hypothetical protein (Fragment) n=3 Tax=Hemiselmis... [more]
A0A5A8D575_CAFRO3.130e-2349.67Kinesin-like protein n=1 Tax=Cafeteria roenbergens... [more]
A0A7S3HBF7_9STRA5.500e-2352.63Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A6A3NJV1_9STRA6.460e-2329.59Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14861contigEcto-sp13_S_contig14861:2..4314 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score167.9
Seed ortholog evalue1.2e-38
Seed eggNOG ortholog2880.D7FRU8
Model size1491
KEGG koko:K20196
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG4280@2759
Cds size1491
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14861.3704.1prot_Ecto-sp13_S_contig14861.3704.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14861 2..4314 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462792.8338888-CDS-Ecto-sp13_S_contig14861:1..1301681462792.8338888-CDS-Ecto-sp13_S_contig14861:1..130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 2..130 +
1681462792.8458183-CDS-Ecto-sp13_S_contig14861:443..5091681462792.8458183-CDS-Ecto-sp13_S_contig14861:443..509Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 444..509 +
1681462792.8579764-CDS-Ecto-sp13_S_contig14861:966..10501681462792.8579764-CDS-Ecto-sp13_S_contig14861:966..1050Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 967..1050 +
1681462792.8670905-CDS-Ecto-sp13_S_contig14861:1651..16991681462792.8670905-CDS-Ecto-sp13_S_contig14861:1651..1699Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 1652..1699 +
1681462792.8788207-CDS-Ecto-sp13_S_contig14861:1937..20481681462792.8788207-CDS-Ecto-sp13_S_contig14861:1937..2048Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 1938..2048 +
1681462792.888957-CDS-Ecto-sp13_S_contig14861:2285..29651681462792.888957-CDS-Ecto-sp13_S_contig14861:2285..2965Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 2286..2965 +
1681462792.899787-CDS-Ecto-sp13_S_contig14861:3178..32991681462792.899787-CDS-Ecto-sp13_S_contig14861:3178..3299Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 3179..3299 +
1681462792.9188995-CDS-Ecto-sp13_S_contig14861:3687..38031681462792.9188995-CDS-Ecto-sp13_S_contig14861:3687..3803Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 3688..3803 +
1681462792.931387-CDS-Ecto-sp13_S_contig14861:4178..43141681462792.931387-CDS-Ecto-sp13_S_contig14861:4178..4314Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14861 4179..4314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14861.3704.1

>prot_Ecto-sp13_S_contig14861.3704.1 ID=prot_Ecto-sp13_S_contig14861.3704.1|Name=mRNA_Ecto-sp13_S_contig14861.3704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=497bp
IQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLA
DLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRLNERDDVICALNDE
LEASEIHQELMEDALDMRTQQLFHLQKALVMHGGNEAEGGDGGDDQTLRG
WIDSPGTAAAATSVATGSDKFLSVRPALHNWQQQQQQQQQRPSTAPQSSS
PFSSGKSSNVNFEATEPLGGRRGGDAGVSSSTTPTELHNRSVSGNTISSP
NGSTTNRSATPAAVFRDREEAHHPSLEEDLITFPRFKPHALMQPTLFSTD
DPARGVSFHDGGILSGGDREQEGEGDRGGGGGGAGRGEALKRAGVGGAKL
LNAWEKIEELEGLVESSRSHNQRLLEDLEEVQTDKVSMEYLLREKLERLV
QSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLK
SGALVQRPLTERQGPDDEIATEVLARTTQELEELRCENAELRKQMLA
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mRNA from alignment at Ecto-sp13_S_contig14861:2..4314+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14861.3704.1 ID=mRNA_Ecto-sp13_S_contig14861.3704.1|Name=mRNA_Ecto-sp13_S_contig14861.3704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4313bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14861:2..4314+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATCCAGGAACGGTCACTGGAGTTCCAGCGGGAGAAGGAAGAGAAGAGGCT CCTGGAAGGGCGCATCGCAATGCTCACCGGACAAATGATCGGGAGGGGCA GACGCTCAGACGGGGGCGCTGAGGGGGTGGTGAGAGGCATGCCCAGGATT CGGGCTAAAGGCGAATGGTTCCCGTTCATTATTGTCGCATTGCGGGTCAT CGCCGAGGTCCCTAGTTGACAACCGTTCGCATGGGAATGAACTATCGACT ATTTCCACACGCATGGTTTGGGTTGCGGGCGGGCAGAAGCTAGGAGGTGA CCGTATTGTGTCGTGACCACCATACACAGCATGCTGTAGATGTCCTGTCG TTCCGCAAGCGTCATAATCGAAGATAGAGCAGGTGTACTATTCAATGACG TTCCTTCTTGTGCTATCGTCTACTCTTCGCGGCGTTTAATAGGACTACGC CGACCGCTTAGCGGACCTCGAGCGAGAGCGCAACACCATTGAGCTGGAAA AGGAGCAGGTGACAATATTCCTGTAAATTCTTTGCTTTTTTTCTTGTTAT TGTTTTGTGGTGGTTTTGTTGAGTTCGTCAATGATAGAGAAAAACTCGTG TGATCCTATCCTTGTCTCCCTCTACATAGGGTAGGGACAGAACAATGCAG TTCCACAAGGAGAGTCTCACTATCGGCGAGGACTATATAGCGCCAGCATG GTTTCATATGGTCGACTTTCAGACTGCTAAAAAATGGAATCTGTAGGTGG TCAAGATGTTTCTAAGGCCCAAGCAATGAGGAAGAGGAAGATCTTTCGAA ACAACGAGTTGCTGCAAGTTGTGGATGTGACACTGTGCCCCACGTCTACC TTCGAAATGCGGGAGATCTGCTGATCGGTGACAGACAATTTCGTCCGTAT GCCCTCACGCCCCGCACCGGCTGTTCCCCCCTCTTGTGATGCTACGGGAC ACGGCCCGCCGGCAGGTGGAGAGGTATAAGCAACTGCTCATGAAACAAAG AGACATCATGATAGCCTTAACCCAACGCCTGAACGAACGGGACGATGTGG TGAGCTTGGAGGAACTCCGGCAACATGGTTGGTTCCACATGTTTACAAAA AGAGACCAACGATGCCGCCGGACCTGAGATTTACCTTTCATGGCGGTGCG CGAGGTCTCGTGCTCAGTGTTCTGCAAGTCGGCTGAGAGCAGTATTGGGA CCACGTCTCGGCAAACGTAAATGTACACGTCCTGGTGCATCGTTTGGGTT GGATTTCCGTGCGGAAAAAGAAAATAATAGTGTTGACTTCTGTCATGCTG ACTTCGCCTGCTCTCCTCACACTGCTCTCTACTCTACCACTCTTGTGGGA ACAAGAGGAGACTTGTTTCAGCCTTACACGAATCCGTCTTTCCCGCCTTG AAAGAGAAATCTCCCCATAAGAACGTTATTCTCTTGCGATTTCTCAACGG CAAGCGATCACCCCGACGAAGGAAACGGACGCATGGGTGGTATCGCTTGT GTATCACCCATGCGTGCGTGGCAAGATGAGTCTTCGACCGGCCAGCCGCC GGCGATCCAGCACGTGCAGCCTTATCCGGGTCTCTCTTAGAGAATAACCT GAACTCTCTTGCGGTTGTCGTGCCTTTGATGTTCTCTTGTCTTGTCACAG ATTTGCGCCCTGAATGACGAGCTAGAGGCGAGCGAGATTCACCAAGAGGT GCGAACTATAAAACGGAAGGGTATTATGTTTGCTTTGCCGCATGTCAACG CTAAGCGCGGTACTCAGCCTCCGTTCGTGTAGTTGTCACGCGAATACGAC CGTTGTATCATCACATTTCCTGCCACGTTCTTCGTTACATTCTTTCAAGT GCCATTGAATGGAACGGCCGAAACCTTGAAATCTACATCCAGCATGAAGA ACGATTTTGCCCAACCCGCCGTTCTTGTGACAACAGCTGATGGAGGATGC GCTTGACATGCGCACGCAACAGCTGTTCCACCTCCAGAAGGCATTAGTGA TGCACGGCGGCAACGAAGCGGAAGGCGGGGACGGTGGTGACGATCAGGTG TGTGCATCAGCTTCGGACGCATCCATCATTCTGGGTCATTGAGATCGATC GAATCTCGACAGACGGGTACGAGAAATAGCTAATGCACGTAGAGGGCTTT TCTGAGGGGGAGACATGGTGTTGTGGCTTATTCCGCCACATGTCGAGGGT TTCACGCCGTGTTTTCATCAGCATGCACCAAATTGAATCGTCTCCGGTTC GTACTTCATGTTCTCATCGCGTGTGGCCTGGCAGACGTTACGTGGGTGGA TAGACTCGCCTGGAACAGCGGCAGCAGCCACAAGTGTGGCGACAGGGTCG GACAAGTTTTTGTCAGTGCGCCCCGCACTCCACAATTGGCAGCAGCAGCA GCAGCAACAGCAGCAGCGTCCTTCGACGGCTCCCCAATCGTCTTCCCCTT TCTCTTCCGGAAAAAGCTCAAATGTCAACTTCGAGGCAACAGAACCGCTG GGGGGAAGGAGGGGTGGAGACGCTGGAGTGTCCTCCTCAACAACGCCAAC AGAGCTACATAACCGTTCTGTTAGCGGTAACACCATCTCCTCACCTAATG GCAGCACCACCAACCGTAGCGCTACCCCAGCAGCTGTATTCAGAGACAGG GAAGAAGCTCACCACCCCTCGCTCGAAGAAGACCTCATTACCTTCCCCAG GTTCAAGCCACACGCGCTGATGCAGCCTACGTTGTTCAGCACCGACGACC CAGCCCGAGGGGTTTCCTTTCATGATGGAGGCATTCTTTCAGGTGGGGAT CGCGAACAGGAAGGCGAAGGCGACCGTGGGGGCGGGGGTGGGGGCGCTGG ACGGGGAGAAGCGCTGAAGAGGGCGGGGGTGGGAGGTGCAAAATTGCTGA ACGCTTGGGAGAAGATCGAGGAGTTGGAAGGGCTGGTAGAGTCAAGCCGG TCTCACAACCAGAGGTAGGGGGGCAGTCCGAGCCTTCGAGCGCTTGTCAG AGTATTTCTTGCATATCGAGGTATCCTCGATACCATGTTGATGAGTTATT GCTATGTCGACACCAGAGAATGTCACCGGGTGGTGGGCGGTTGGTTGACT CTATTCCTGAGTTCAGCTTTCTCATGCCGTAGCGTCATTCCGCTGTGCAC ATAGTGTCTTTCCCTCCATCACCGCAGGTTGCTCGAAGACCTGGAGGAGG TGCAAACCGACAAGGTTTCCATGGAATATCTCCTTCGCGAGAAACTGGAA CGGCTGGTTCAGTCCGAGATCGAGGCGCGAGTTGCCCGAATGCATCAGGT ACGAAAACCAAGGTGTATTGGCCGCTCGGTGCTTTCACTACGGGGAATCT TTGTATCGTCCGCGCTTGCAATTGTCGTCTGCCCCTCGCTAGCGTATTTC ATCGCCGCTACTGACGTGCCACAGACTCCGGGCTGCGTGTGCCAGAAGTT CGGCGACGAAACGCGATCATCGATGACGCAAATATATTCTTCTTGCGAAC GTAGAAGCCGCATGATCTGTGCCCTGAATTCTCTCGCCTTTCCCAACAGC ATCTGCCTCCTACGTCTGAATCGCGTAAGAACATAGCCCTGTTTCGCACA CACTCAGACCATTACCTTGTTCGAGCAGAAATTCAGCCAGCTAACGAGTC GCCCCACCCCTCCTTCCCCGCGCTCCGGATCTCAAGGATGGCGGAGTTGA CGAAATATTGCGGCGCCAGCTGGACGGCCTACGGGTAGAAGCTGCCGCAA GGGCAAGGAGTGAAGCTGTTCTGAGGGAGGAAATCCGTTGTCTCAAGAGC GGGTAACGTGACCGTCGAGGGCGTCCATTTGAATTGAGTCTGATACATCC CCTCGCTCACTACACAGAGCAAGGCAGACTGCATAAAATTACCCTTTCGC GGCCTGTTGCACGGACTGGTGCCCCACACGTTGCGAAATGCTTTACCTCG ATGGTTTTTGGTTCATGAGTATCTCGTCCCCGATCGTGGGATAGAGTGTA CCAGTCAATGTTGGAACTGGGTTCCGGTACTGAAAATGTACCGCAGGCTA TAAATTTACAACGCTTCTCGTTGCAGTATTGTCCGAATGGCAAGAGGAGT TAAGCTTCGCGAAGCTGTGGTGTGCAGATCATCTGTGGTGTTCTTATCGA TGGCGTTTGGGAACATGCACAACGCAGCGCACTCGTGCAACGCCCTCTTA CGGAGCGCCAAGGGCCGGACGATGAAATCGCGACCGAGGTCCTAGCCAGG ACTACACAGGAGCTCGAGGAGCTTCGCTGCGAGAACGCGGAGTTACGAAA GCAGATGCTTGCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14861:2..4314+

>mRNA_Ecto-sp13_S_contig14861.3704.1 ID=mRNA_Ecto-sp13_S_contig14861.3704.1|Name=mRNA_Ecto-sp13_S_contig14861.3704.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1491bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14861:2..4314+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATCCAGGAACGGTCACTGGAGTTCCAGCGGGAGAAGGAAGAGAAGAGGCT
CCTGGAAGGGCGCATCGCAATGCTCACCGGACAAATGATCGGGAGGGGCA
GACGCTCAGACGGGGGCGCTGAGGGGGTGGACTACGCCGACCGCTTAGCG
GACCTCGAGCGAGAGCGCAACACCATTGAGCTGGAAAAGGAGCAGGTGGA
GAGGTATAAGCAACTGCTCATGAAACAAAGAGACATCATGATAGCCTTAA
CCCAACGCCTGAACGAACGGGACGATGTGATTTGCGCCCTGAATGACGAG
CTAGAGGCGAGCGAGATTCACCAAGAGCTGATGGAGGATGCGCTTGACAT
GCGCACGCAACAGCTGTTCCACCTCCAGAAGGCATTAGTGATGCACGGCG
GCAACGAAGCGGAAGGCGGGGACGGTGGTGACGATCAGACGTTACGTGGG
TGGATAGACTCGCCTGGAACAGCGGCAGCAGCCACAAGTGTGGCGACAGG
GTCGGACAAGTTTTTGTCAGTGCGCCCCGCACTCCACAATTGGCAGCAGC
AGCAGCAGCAACAGCAGCAGCGTCCTTCGACGGCTCCCCAATCGTCTTCC
CCTTTCTCTTCCGGAAAAAGCTCAAATGTCAACTTCGAGGCAACAGAACC
GCTGGGGGGAAGGAGGGGTGGAGACGCTGGAGTGTCCTCCTCAACAACGC
CAACAGAGCTACATAACCGTTCTGTTAGCGGTAACACCATCTCCTCACCT
AATGGCAGCACCACCAACCGTAGCGCTACCCCAGCAGCTGTATTCAGAGA
CAGGGAAGAAGCTCACCACCCCTCGCTCGAAGAAGACCTCATTACCTTCC
CCAGGTTCAAGCCACACGCGCTGATGCAGCCTACGTTGTTCAGCACCGAC
GACCCAGCCCGAGGGGTTTCCTTTCATGATGGAGGCATTCTTTCAGGTGG
GGATCGCGAACAGGAAGGCGAAGGCGACCGTGGGGGCGGGGGTGGGGGCG
CTGGACGGGGAGAAGCGCTGAAGAGGGCGGGGGTGGGAGGTGCAAAATTG
CTGAACGCTTGGGAGAAGATCGAGGAGTTGGAAGGGCTGGTAGAGTCAAG
CCGGTCTCACAACCAGAGGTTGCTCGAAGACCTGGAGGAGGTGCAAACCG
ACAAGGTTTCCATGGAATATCTCCTTCGCGAGAAACTGGAACGGCTGGTT
CAGTCCGAGATCGAGGCGCGAGTTGCCCGAATGCATCAGGATGGCGGAGT
TGACGAAATATTGCGGCGCCAGCTGGACGGCCTACGGGTAGAAGCTGCCG
CAAGGGCAAGGAGTGAAGCTGTTCTGAGGGAGGAAATCCGTTGTCTCAAG
AGCGGCGCACTCGTGCAACGCCCTCTTACGGAGCGCCAAGGGCCGGACGA
TGAAATCGCGACCGAGGTCCTAGCCAGGACTACACAGGAGCTCGAGGAGC
TTCGCTGCGAGAACGCGGAGTTACGAAAGCAGATGCTTGCT
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