mRNA_Ecto-sp13_S_contig1482.3677.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A6H5K8U5_9PHAE (Acyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U5_9PHAE) HSP 1 Score: 688 bits (1776), Expect = 3.030e-243 Identity = 338/373 (90.62%), Postives = 346/373 (92.76%), Query Frame = 1
Query: 1 MAHQAGGTTTNGERTSSSPPSAGWIRNTDLYRATGGRKLRQADRHKVLGELSQELNTNVGDQQPMTALQEAFSIFLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILLGLGAVVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELIIQ 1119
MAHQ GGTTT+GERTSSSPPSAGWIRNTDLYRATGGR+L QADRHKVL ELSQEL+T+V DQQPMTALQEAFSI LFFLFPGCMVWVPFALAG AWAA+RYLPAGGA QILLGLGAV LFFWPL HWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTM+SFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFL+ARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYG+LRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPK AELRRIFDKYKGPYGWGEKELIIQ
Sbjct: 1 MAHQPGGTTTDGERTSSSPPSAGWIRNTDLYRATGGRELSQADRHKVLRELSQELSTDVRDQQPMTALQEAFSILLFFLFPGCMVWVPFALAGVAWAAHRYLPAGGALQILLGLGAVALFFWPLRHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMISFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLRARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKSAGEPTQADIDKYHDLFVAELRRIFDKYKGPYGWGEKELIIQ 373
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: D7G7D5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D5_ECTSI) HSP 1 Score: 603 bits (1555), Expect = 1.690e-209 Identity = 291/320 (90.94%), Postives = 297/320 (92.81%), Query Frame = 1
Query: 160 ELNTNVGDQQPMTALQEAFSIFLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILLGLGAVVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELIIQ 1119
EL+ +VG QQPMTALQEAFSI LFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQ+LLGLGAV LFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFP+VWGFSFKGLTTDAALRLPLMRHVM WIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYG+LRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPK AELRRIFDKYKGPYGWGEKELII+
Sbjct: 69 ELSADVGHQQPMTALQEAFSILLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQVLLGLGAVALFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPMVWGFSFKGLTTDAALRLPLMRHVMAWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKPAGEPTQADIDKYHDLFVAELRRIFDKYKGPYGWGEKELIIR 388
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A836C9N4_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N4_9STRA) HSP 1 Score: 324 bits (830), Expect = 5.850e-101 Identity = 164/357 (45.94%), Postives = 227/357 (63.59%), Query Frame = 1
Query: 55 PPSAGWIRNTDLYRATGGRKLRQADRHKVLGELSQELNTNVGDQQP--MTALQEAFSIFLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILLGLGAVVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELIIQ 1119
PP GW+R TDL A+G + A+R+ VL L+Q L T ++P ++ LQ+ + F FPGC++WVPF + G A+ A+R A A + + AV L WP + WP F +++TP +FRY S +AWEAPL + L PPHG+LP+ NL+ +L F +WGF GLT DAALRLP+MR +M+W+GC SA + G S+G+ PGGVAEIFD N+ +EV+F++ARKGFV+L+LR GT LVPCY FGNT++F W D +RA+SR+LGFG++ +WGR LP+I RQPL +TG PI VP EL+ +FD++KG YGWG+K+L+I+
Sbjct: 10 PPPQGWVRMTDLV-ASGSYDMATAERNGVLNALAQPLKTAPSYKEPQRLSFLQDLAGVLAFLFFPGCLIWVPFIICGGAYLAFRSGTAAIATYVF-AMAAVTL--WPHTRWPGFIASFVTPIVFRYCSLVYAWEAPLPNRH--HILVCPPHGVLPIANLLLLLGFRAIWGFDVDGLTADAALRLPVMRQIMSWVGCGSATASAAKVQLDRGRSIGISPGGVAEIFDVNDPDEVIFMRARKGFVRLALRSGTPLVPCYCFGNTQLFHCWYDSGNRMRAISRRLGFGVMPIWGRFGLPVIYRQPLFAITGTPIEVP-LDPNPSAETVDKFHALFLEELQGLFDRHKGAYGWGDKQLVIR 359
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A1S6KM83_9STRA (Acyltransferase n=2 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S6KM83_9STRA) HSP 1 Score: 247 bits (630), Expect = 3.740e-71 Identity = 149/366 (40.71%), Postives = 207/366 (56.56%), Query Frame = 1
Query: 55 PPSAGWIRNTDLYRATGGRKLRQADRHKVLGELSQEL------NTNVGDQQPMTALQEAFSIFLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILLGLGAVVLFFWPLSHWPA-----FTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELIIQ 1119
PPSA ++ T +Y ATG + DR KV+ LS+ L + GD + MT +E +I + G M+W+P A+ G A Y+ + A ++L + F+ LS P + + IF+Y S A +APL+ SAG Y APPHG+LP+GNL+T+ + G F+GLTTD ALRLPL RH + IG +A R + + +GWS+G+ GGVAEIF+ NN +EV+ +K RKGFVKL+LR GT LV CY FGNT++ +W D GVL LSR L G+L +WGR LP++ R P+L +PIVVPK L +FD+YK YGW +K+L+I+
Sbjct: 40 PPSARYVNMTQVY-ATGAHNMPDEDRLKVMNGLSKPLTEAKPGDLGFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFA----LYVRSAMAWVVML------IVFFTLSLHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLD-SAGRYIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLYGWPDKKLLIK 393
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: W7TJC9_9STRA (Acyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJC9_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.200e-59 Identity = 111/257 (43.19%), Postives = 156/257 (60.70%), Query Frame = 1
Query: 349 VVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELIIQ 1119
V L P+S + + + IF+Y S A + P++ S G Y APPHG+LP GNL+T+ + G F+GLTTD ALRLP+ RH + +G A R + + +GWS+G+ GGVAEIF+ NN++EV+ +K RKGFVKL+L+ GT LVP Y FGNT++ +W D G L+ +SR FG+LL+WGR LP++ R P+L V +PIVVP+ L +FD YKG YGW +K+L+I+
Sbjct: 113 VALSLHPVSRVHSMVHSPLNYFIFKYFSMKMASDYPID-SKGQYIFVAPPHGVLPFGNLLTVHAMKSCGGMEFRGLTTDVALRLPIFRHYLGLVGTIPASRHVARKYLDKGWSLGISSGGVAEIFEVNNNDEVILMKERKGFVKLALQTGTPLVPSYIFGNTKLLSAWYDDAGALQGISRYFKFGILLLWGRFGLPLMHRHPVLGVMAKPIVVPRAEGEPTQDMIDTIHAQFCDSLIALFDDYKGLYGWPDKKLLIK 368
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A7S2S8P9_9STRA (Acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8P9_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.260e-58 Identity = 130/319 (40.75%), Postives = 175/319 (54.86%), Query Frame = 1
Query: 190 PMTALQEAFSIFLF-FLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILLGLGAVVLFFWP-------LSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNN--DNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELII 1116
P+ L EA ++ LF F PG + P + Y G P ++L AV L F P LS WPA + I RY S + PLE PY L APPHG+ P GN+VTM++FP V G+SFKGL AALR P+ +H++T IG A R +++ +G ++G+ GGVAE+F++N+ +E + LK RKG VKL+ R G +LVPCY FGNT++ D GVLR +SRK+GF L+L WGR LLPI R P+L G+PI VP+ A + +FD +K YGW K L+
Sbjct: 91 PLPFLDEAVAVLLFAFGVPGFIFTFPMLVFAV------YCVWGPRPAVVLVGIAVALVFVPARFSEKSLSSWPALS-------IMRYFSFKAVYREPLEVGK-PYILVAPPHGVFPFGNIVTMITFPAVMGYSFKGLAASAALRFPVFKHLLTTIGAIDASRASATKALNQGHTIGISTGGVAEVFETNSATGDECVVLKDRKGLVKLAFRTGASLVPCYLFGNTQLLSLAYDGSGVLRWISRKVGFALILFWGRFLLPIPYRIPILGGLGKPIPVPEVENPTNEQIDEMHDKLLAA-MEELFDTHKAIYGWEGKRLVF 394
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A1E7FKA1_9STRA (Acyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKA1_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.510e-46 Identity = 93/221 (42.08%), Postives = 134/221 (60.63%), Query Frame = 1
Query: 475 PYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQD---PYG--VLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXAE-LRRIFDKYKGPYGWGEKELIIQ 1119
P + APPHG+ P GN++++LSFP ++G +F+GL + AALR P+ + ++ IG A R ++ G S+G+ GGVAEIF +N+D+E + LK R G +KL++R GT +VPCY FGNT++ W P G VL +SRK+GF L+L+ GR LPI R+P+L V +PI E ++RIFD YK YGW +K+LII+
Sbjct: 107 PSIMVAPPHGVFPYGNILSVLSFPALYGCTFRGLASSAALRPPIFKQILRSIGIVDASRHVARNTLENGESIGISTGGVAEIFFTNDDDECILLKERIGLIKLAIRTGTNIVPCYLFGNTKLLNCWAGEGIPGGRYVLEKISRKIGFALILIHGRFFLPIPFRKPVLGVMSKPIPTHHIQNEDPTPEQIECIQAQLLEEMKRIFDTYKHLYGWDDKKLIIK 327
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A448ZRQ3_9STRA (Acyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ3_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.160e-43 Identity = 123/347 (35.45%), Postives = 175/347 (50.43%), Query Frame = 1
Query: 127 DRHKVLGELSQELNTNVGDQQPMTALQEAFSI-FLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQI--LLGLGAVVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEA---PLEASAGPY---FLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGW-SVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDP-----YGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXX-AELRRIFDKYKGPYGWGEKELIIQ 1119
+R + LS+ +V + MT EA + FL F+ P + +P A+A L G + G+ + L P P ++++ + +Y S F E P E + Y APPHG+ P GN+++ML FP ++G F+GL + AALR P+ + V+ IG A R VARS EG S+G+ GGVAEIF +N +E + LK R G +KL++R G LVPCY FGNT + W VL SRKLGF L+L++GR LPI R+P+L V G+P+ E+ RIF+ YK YGW EK++II+
Sbjct: 41 ERKRHFVPLSKVKKGDVLKVEKMTFFAEALCVLFLAFVVPNGVFTLPPAIA-----LIGKLVLGDVKMAFKIFGMFLLPLAILPQEFVPTSLQSYLAIQVSKYFSFRFVVEKRPPPPEPTNKNYHSGIYVAPPHGVFPYGNILSMLGFPTMFGHHFRGLASSAALRPPIFKQVLRSIGTIDASRH-VARSALEGGESIGISTGGVAEIFFTNEKDECILLKERIGLIKLAIRTGADLVPCYLFGNTTLLNCWAGEGIPGATTVLEKFSRKLGFALILIYGRFFLPIPFRKPILAVMGKPVHTHHVKGEDPTPEQIEMIQTQLLTEVERIFNTYKHLYGWDEKKIIIK 381
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: J7HZ45_PHATR (Acyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=J7HZ45_PHATR) HSP 1 Score: 156 bits (394), Expect = 5.700e-38 Identity = 113/351 (32.19%), Postives = 174/351 (49.57%), Query Frame = 1
Query: 127 DRHKVLGELSQELNTNVGDQQPMTALQE-AFSIFLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQILL-GLGAVVLFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAP----------LEASAGPYFLCAPPHGILPVGNLVTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGW--SVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDP-----YGVLRALSRK-LGFGLLLVWGRMLLPIILRQPLLVVTGRPI-VVPKXXXXXXXXXXXXXXXXXXAELRRIFDKYKGPYGWGEKELII 1116
DR +Q +V QPM+ ++ A +FL F P + +P A W +++ LL G + L P + PA ++W+ I +Y S E +E A P + A PHG+ P GN +T++++PL+ G GL +AALR P+ + ++ IG + A R V ++ E W +VG+ PGGVAE+F++N+ NE + LK R G +K+++R G LVP Y +GNT ++ W +L +SRK LGF L+ + GR LPI R P+L V G+PI + EL+ +FD+YK YGW ++ L+I
Sbjct: 46 DRGLATKPAAQATKEDVLTVQPMSFVEHTACCLFLAFGVPNGALTIPIA----TWLIGKFVLRNVFLAFLLAGCILLPLAILPQEYVPARLQSWLALQILKYFSFSLVMEERPPTMCTGKQLIEQPARPRIVTAYPHGVFPYGNALTVVTWPLLTGHHIVGLAANAALRTPIFKQILRSIGVKDASRASVRNAL-ETWPFTVGISPGGVAEVFETNHFNEHILLKERIGVIKMAIRTGADLVPGYMYGNTNLYWCWTGEGIPGARWLLEYVSRKILGFALVPIAGRWRLPIPYRTPILCVVGKPIPTIHLQTEEPSMEQIVDIQEQLSTELKSMFDRYKHLYGWEDRMLVI 391
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Match: A0A6B2LBC0_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LBC0_9EUKA) HSP 1 Score: 152 bits (384), Expect = 1.380e-37 Identity = 97/283 (34.28%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 304 LPAG--GAPQILLGLGAVVL--FFWP--LSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNL----VTMLSFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGVLRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKXXXXXXXXXXXXXXXXXXA--ELRRIFDKYKGPYGWGEKELII 1116
LPAG P + + L A+V +WP + +W +F +I RY + E PL+ S Y +C PHG+ P+G L V + P G G+++D+ ++PL RH+ +W+GC+ A RE + +GE S G+ GG+AE++ + D+E + L++RKGFV+++L G+ LVP Y FGN++I R L++ SRKL L +V+GR LP+ PL +V G+P+ VPK L+ +FD K YGW ++L+I
Sbjct: 21 LPAGMYWYPWVFVPLTALVWSSIYWPSPVCYWESFINGYIMEQCRRYFKMTYKVEQPLDTSRN-YLICHFPHGVFPLGPLLGSSVVKIMSP---GLKVYGISSDSIFKIPLYRHIFSWLGCRPATRENFKKLLGEA-SCGVVVGGLAEMYMQHEDHEEVLLRSRKGFVEVALETGSPLVPVYYFGNSQILRFVPKS---LQSFSRKLRVSLGIVYGRYFLPVPFLVPLHMVVGKPVEVPKMAKEDPEFPKMVEEVHQRLVQALQELFDNNKEEYGWKNRKLVI 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1482.3677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1482.3677.1 >prot_Ecto-sp13_S_contig1482.3677.1 ID=prot_Ecto-sp13_S_contig1482.3677.1|Name=mRNA_Ecto-sp13_S_contig1482.3677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp MAHQAGGTTTNGERTSSSPPSAGWIRNTDLYRATGGRKLRQADRHKVLGEback to top mRNA from alignment at Ecto-sp13_S_contig1482:7808..15290- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1482.3677.1 ID=mRNA_Ecto-sp13_S_contig1482.3677.1|Name=mRNA_Ecto-sp13_S_contig1482.3677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7483bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1482:7808..15290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1482:7808..15290- >mRNA_Ecto-sp13_S_contig1482.3677.1 ID=mRNA_Ecto-sp13_S_contig1482.3677.1|Name=mRNA_Ecto-sp13_S_contig1482.3677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1482:7808..15290- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |