mRNA_Ecto-sp13_S_contig14797.3655.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5K3X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X2_9PHAE) HSP 1 Score: 618 bits (1594), Expect = 8.010e-214 Identity = 370/409 (90.46%), Postives = 385/409 (94.13%), Query Frame = 1
Query: 70 MAAEMSDLEGFEMLDETFGVREASEASDSETCPNSPLQLDRAGSLDNDGQHHLHSCEGGMAAGGRPAKCHATQAPGEGTVPETEKGKQPSASPIMRGKRGVGWTSEPRKGGAAGDMASLQARAEGREVLMPTKEVPEAAPAATLTFGDFPAISTAESSHSAGVSFQAPSARDQPARPEATSAASFGSQREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATPSVMPPAALAFGHESDGPDSYGSASPAAAAADEEAIVELVGMGFDREHVVRALKECGRGESWKEAAISLLLEPQVSSLADAEEGLSGTGRQGAAAMQGYADAAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERV 1296
MA EMSD EGFEMLDETFGVREASEASDSET PNSP+QLDR GSLDNDGQHHLHSCEGGM AGG P+K HATQAPGEGTVP+TEK KQPSASP++RG+RG GWT+E KGG AGD+ASLQARAEGR L+ +KEVPEAAPAATLTFGDFPAISTAESSHSAGVS QAP ARDQPAR EA SAA FGSQREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATPSV+PPAAL+FGHESD PDSYGSASPAAAAADEEAI ELVGMGFDREHVVRALKECGRGESWKEAAISLLLEPQVSSLA+AEEGLSGTGRQGAAAMQG+ADAAPAASQSPCPVCFEDIQAGEVFTVDC+EQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERV
Sbjct: 1 MADEMSDHEGFEMLDETFGVREASEASDSETFPNSPVQLDRTGSLDNDGQHHLHSCEGGMVAGGLPSKRHATQAPGEGTVPQTEKSKQPSASPVVRGERGAGWTNESGKGGVAGDVASLQARAEGRGALVTSKEVPEAAPAATLTFGDFPAISTAESSHSAGVSLQAPPARDQPARLEAASAAPFGSQREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ATPSVVPPAALSFGHESDRPDSYGSASPAAAAADEEAIFELVGMGFDREHVVRALKECGRGESWKEAAISLLLEPQVSSLAEAEEGLSGTGRQGAAAMQGFADAAPAASQSPCPVCFEDIQAGEVFTVDCEEQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERV 407
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: D7FH16_ECTSI (Zinc finger family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH16_ECTSI) HSP 1 Score: 257 bits (656), Expect = 4.280e-77 Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 1
Query: 895 MGFDREHVVRALKECGRGESWKEAAISLLLEPQVSSLADAEEGLSGTGRQGAAAMQGYADAAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDSALIPACPLSTMKCGHELGQEEVERV 1296
MGFDREHVVRAL+ECGRGESWKEAAISLLLEPQVSSLA EEGLSGTGRQGAAAMQ +ADAAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDS LIPACPLSTMKCGHELGQEEVERV
Sbjct: 1 MGFDREHVVRALRECGRGESWKEAAISLLLEPQVSSLAGWEEGLSGTGRQGAAAMQRFADAAPAASQSPCPVCFEDIQAGEVFTVDCKEQHTFCVDCLHHHCRVQLLDS-LIPACPLSTMKCGHELGQEEVERV 133
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5K984_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K984_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.280e-15 Identity = 51/92 (55.43%), Postives = 56/92 (60.87%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LE YGKLKE
Sbjct: 20 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLETYGKLKE 97
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5KZF0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF0_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.990e-15 Identity = 52/92 (56.52%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LEIYGKLKE
Sbjct: 140 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKE 217
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5K8S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8S6_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 3.490e-15 Identity = 51/92 (55.43%), Postives = 56/92 (60.87%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LE YGKLKE
Sbjct: 31 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLETYGKLKE 108
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5JWP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP1_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 6.340e-15 Identity = 51/92 (55.43%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRS+D LEIYGKLKE
Sbjct: 55 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSDDHLEIYGKLKE 132
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5KF79_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF79_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.110e-14 Identity = 52/92 (56.52%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LEIYGKLKE
Sbjct: 318 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKE 395
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5KVE0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE0_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.890e-14 Identity = 52/92 (56.52%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LEIYGKLKE
Sbjct: 466 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKE 543
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5KVQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.680e-14 Identity = 52/92 (56.52%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LEIYGKLKE
Sbjct: 785 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKE 862
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 4.140e-14 Identity = 52/92 (56.52%), Postives = 57/92 (61.96%), Query Frame = 3
Query: 1245 VDHEVWPRAWPRGSRAGKW------VWKRTSHAR*ESKTPVPPPPQQETLDTEGFGGFKKKVKEMLESREEANLRGKVRSEDPLEIYGKLKE 1502
VD W +A P G + +W VWK ++ETLDTEGFGGFKKKVKEMLESREEA LR KVRSED LEIYGKLKE
Sbjct: 22 VDKAAWGKATP-GKKGIRWDKVVERVWKEIGD-------------EEETLDTEGFGGFKKKVKEMLESREEATLRKKVRSEDHLEIYGKLKE 99 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14797.3655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14797.3655.1 >prot_Ecto-sp13_S_contig14797.3655.1 ID=prot_Ecto-sp13_S_contig14797.3655.1|Name=mRNA_Ecto-sp13_S_contig14797.3655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=452bp MAAEMSDLEGFEMLDETFGVREASEASDSETCPNSPLQLDRAGSLDNDGQback to top mRNA from alignment at Ecto-sp13_S_contig14797:1503..4326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14797.3655.1 ID=mRNA_Ecto-sp13_S_contig14797.3655.1|Name=mRNA_Ecto-sp13_S_contig14797.3655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2824bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14797:1503..4326+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14797:1503..4326+ >mRNA_Ecto-sp13_S_contig14797.3655.1 ID=mRNA_Ecto-sp13_S_contig14797.3655.1|Name=mRNA_Ecto-sp13_S_contig14797.3655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1356bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14797:1503..4326+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |