prot_Ecto-sp13_S_contig1471.3601.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1471.3601.1
Unique Nameprot_Ecto-sp13_S_contig1471.3601.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1471.3601.1 vs. uniprot
Match: A0A6H5K2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H6_9PHAE)

HSP 1 Score: 526 bits (1356), Expect = 1.540e-185
Identity = 277/299 (92.64%), Postives = 283/299 (94.65%), Query Frame = 0 
Query:    1 MEEQAAFWGPSSNLDTAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAWRDARKGPAPEGVLDRANGFWREVVKVERGIRTALREADRDTLQAVGVVATAAAVLACAVYFREAASGAIGTIGGAAKGGSTGDSEGGGYNKKKGPGRIKNKAVASRGGSENDDSSRTTADGVKCQAPGDSDGPSMRVTRNRGRHPVETGTPSPGT 299
            MEEQAAFWGPSSNLD AQEQLNRQLCVAI+RCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSE MKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAW+DARKGPAPEGVLDRANG WREVVKVERGIRTALRE DR+TLQAVGVVA AAAVLACAVYFREAA GAIGTIGGA KGGS GDSEGGG +KKKGPGRIK+KAV SRGGS NDDSS TTADGV+C APGDSDGPSM VTRNRGRHPVETGT  PGT
Sbjct:  145 MEEQAAFWGPSSNLDEAQEQLNRQLCVAIKRCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEGMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAWQDARKGPAPEGVLDRANGVWREVVKVERGIRTALREMDRETLQAVGVVA-AAAVLACAVYFREAALGAIGTIGGATKGGSPGDSEGGGNDKKKGPGRIKDKAVGSRGGSGNDDSSETTADGVECHAPGDSDGPSMTVTRNRGRHPVETGTHGPGT 442
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BLAST of mRNA_Ecto-sp13_S_contig1471.3601.1 vs. uniprot
Match: D7FL46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL46_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 3.530e-160
Identity = 250/301 (83.06%), Postives = 255/301 (84.72%), Query Frame = 0 
Query:    1 MEEQAAFWGPSSNLDTAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAWRDARKGPAPEGVLDRANGFWREVVKVERGIRTALREADRDTLQAVGVVATAAAVLACAVYFREAASGAIGTIGGAAKGGSTGDSEGGGYNKKKGPGRIKNKAVASRGGS--ENDDSSRTTADGVKCQAPGDSDGPSMRVTRNRGRHPVETGTPSPGT 299
            MEEQAAFWGPSSNLD AQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEP+FV   TKSAW+DARKGPAPEGVLDRANG WREVVKVERGIR ALREADRDTLQAVGVVATAAAVLACAVYFREAASGAI +   AAKGG  GDS  G                          DD SRTTADG + QA  +SDGPSMRVTRNRGRHPVETGTP PGT
Sbjct:    1 MEEQAAFWGPSSNLDKAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGEDLRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGKDRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPSFVREGTKSAWQDARKGPAPEGVLDRANGVWREVVKVERGIRMALREADRDTLQAVGVVATAAAVLACAVYFREAASGAIVSFRDAAKGGPAGDSNDGXXXXXXXXXXXXXXXXXXXXXXXXNQDDPSRTTADGPQPQARSNSDGPSMRVTRNRGRHPVETGTPGPGT 301
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1471.3601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2H6_9PHAE1.540e-18592.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL46_ECTSI3.530e-16083.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1471contigEcto-sp13_S_contig1471:8121..11383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1471.3601.1mRNA_Ecto-sp13_S_contig1471.3601.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1471 8121..11383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1471.3601.1 ID=prot_Ecto-sp13_S_contig1471.3601.1|Name=mRNA_Ecto-sp13_S_contig1471.3601.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=300bp
MEEQAAFWGPSSNLDTAQEQLNRQLCVAIERCVGRAVVVLDNVHLLQGED
LRVLDTMLSLTDGRKSNMECNGHKVSGEGCLFLLLLNEEGSEDMKRLSGK
DRLLSAWEFRGMEFTTRAFVGRVDVAVSLSKEPTFVPAETKSAWRDARKG
PAPEGVLDRANGFWREVVKVERGIRTALREADRDTLQAVGVVATAAAVLA
CAVYFREAASGAIGTIGGAAKGGSTGDSEGGGYNKKKGPGRIKNKAVASR
GGSENDDSSRTTADGVKCQAPGDSDGPSMRVTRNRGRHPVETGTPSPGT*
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