mRNA_Ecto-sp13_S_contig14614.3545.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: D7FW06_ECTSI (PHM7_cyt domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW06_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 7.660e-172 Identity = 266/273 (97.44%), Postives = 270/273 (98.90%), Query Frame = 1
Query: 19 RRLFEFVRGGVLGAGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST 837
RRLFEF+RGGVLGAGIVCLVALIIY+LAESEAT AAAFIA+NNAVLPKVMM IM XXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVAS+AMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST
Sbjct: 563 RRLFEFIRGGVLGAGIVCLVALIIYLLAESEATVAAAFIAINNAVLPKVMMAIMXXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASMAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST 835
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.180e-59 Identity = 115/252 (45.63%), Postives = 164/252 (65.08%), Query Frame = 1
Query: 28 FEFVRGGV---LGAGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDG-LCPTDEVV 771
+ + GV + AGI+ ++A +IY+ ++++ AA FI+V N VLP ++ +++ T S ++SL+LKIV+ QWMNTAFIIY I E +I+QIS D + P++ +LD+P R + VL+ A Q KMNSYF+GS LAERYAS+LKT FV LF+SA+FP GYF+A++A+F+TYW +KYCL W PPM LA +R YLA+A+++ ++V+L FYA WPFD LC T E V
Sbjct: 429 YRLIEQGVTLAITAGIIAVLAALIYLTSKADNALAAIFISVVNKVLPILIKLVVRKEHHL----TDSGLQSSLLLKIVILQWMNTAFIIYIITPSDEFLTRGFIDQISN----DVYVSPVIMLLDIPGRLSRLVLSRTAHNQLKMNSYFIGSPWFLAERYASMLKTAFVALFFSALFPAGYFIAALALFVTYWVNKYCLLRLWATPPPMGAFLAQLSRSYLALAVLVKLLVTLNFYANWPFDNELCKTGETV 672
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835ZBF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF6_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.020e-52 Identity = 101/198 (51.01%), Postives = 139/198 (70.20%), Query Frame = 1
Query: 58 AGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMND 651
A +V + ALII+ + + +AAFI+++N VLP TI+K T S ++SL++KI++ QWMNTAFIIY I + E+Y+ QISK DAFTQP++ +LDLP + YVLAPMAK+Q KMNSYF+GS LAERY+++LKT+FV L++SAIFP GYF+A++AMF+ YW +KYCL W+ PPM+D
Sbjct: 306 AVLVGISALIIWATSLVDPVFSAAFISISNTVLP----TIIKMITAKEHHLTDSAQQSSLLMKIIMVQWMNTAFIIYIIRPRPDLLTEEYVAQISK----DAFTQPILLLLDLPGKLSHYVLAPMAKSQLKMNSYFLGSGWFLAERYSNMLKTVFVALYFSAIFPAGYFIAALAMFINYWVNKYCLLRIWRTPPPMSD 495
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2WAC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAC1_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.500e-41 Identity = 80/220 (36.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFI--NSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQV 777
A I++ N VLP++ +++ T S E S + K V +W + I+Y + + ++ YI QI K+L ADA T P+++V D+ K+Y+LAP+A T A+ + G+ +LAERY L KT+ + LFYSAI P GY+ +++A F+++W K+C+ +++ PP D L TR +A+ ++IH +++ FY GWP+D LCPT ++V V
Sbjct: 208 AIMISLWNGVLPEINRVLVQTFESHH---TWSDVEDSFLTKTVACRWFTSTLILYIVALSDPTQFLGVYYIQQIQKVLLADALTNPIIRVCDVSGNLKRYILAPIAGTDARAKALNEGTDWLLAERYTDLAKTILMSLFYSAILPTGYWYSALACFISFWVDKFCILRLFRQKPPSGDKLVRITRTTIAVIILIHCVITAHFYYGWPYDELCPTKQLVNV 424
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2WAU7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAU7_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.480e-40 Identity = 80/220 (36.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query: 124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFI--NSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQV 777
A I++ N VLP++ +++ T S E S + K V +W + I+Y + + ++ YI QI K+L ADA T P+++V D+ K+Y+LAP+A T A+ + G+ +LAERY L KT+ + LFYSAI P GY+ +++A F+++W K+C+ +++ PP D L TR +A+ ++IH +++ FY GWP+D LCPT ++V V
Sbjct: 480 AIMISLWNGVLPEINRVLVQTFESHH---TWSDVEDSFLTKTVACRWFTSTLILYIVALSDPTQFLGVYYIQQIQKVLLADALTNPIIRVCDVSGNLKRYILAPIAGTDARAKALNEGTDWLLAERYTDLAKTILMSLFYSAILPTGYWYSALACFISFWVDKFCILRLFRQKPPSGDKLVRITRTTIAVIILIHCVITAHFYYGWPYDELCPTKQLVNV 696
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2MCA3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCA3_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.430e-37 Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 1
Query: 166 MMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRR-YLAIALVIHVMVSLQFYAGWPFDGL 750
+++IMK T + EA+L+ K+VLA+W + I Y + S + I + IL DA P+V++ D F YV AP +KTQ MN F G+ LAER+A L KT+ +C+ +SAI PQ YF+ +A+ + YW+ KYCLF W+ PPM DS V+T R L+I +V H +L + AGWPFD +
Sbjct: 550 LLSIMKEINKKEPHPTKTRQEAALLFKLVLARWAISGVIFYVVTDWSSTVKAENIKALVAILLTDAIMNPVVRLCDFGGLFLTYVKAPASKTQEGMNECFKGAEWFLAERFADLSKTILICMCFSAIVPQSYFITGLAVTVNYWADKYCLFRIWQ-VPPMIDSTIVATARTQLSITVVFHCFYTLHYIAGWPFDSV 744
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.870e-33 Identity = 80/242 (33.06%), Postives = 127/242 (52.48%), Query Frame = 1
Query: 100 AESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMF 825
A+S ATG ++V N +LP V+ I + SL LK A++MNTA I + I + + I I IL +DA P V ++D+ K+ L+ AKT AK+ F G+ L ERY + KT+FV +FY+A+FP G +VA++ TYW+ KY L W++ P + LA+ R ++ +L++H++++ +Y GWPFD + + V + D+ + N G F
Sbjct: 410 AKSTATGLV--VSVINVLLPIVLRMITMVEKHVD----QGNKQDSLFLKTTAARFMNTAIINFMITDFHDTLDAAAIKTIMSILISDAIITPTVGLIDISGNLKRLFLSKFAKTHAKLEKNFQGTPWNLGERYTGMSKTLFVAMFYAALFPPGLWVAALCFAYTYWADKYLLLRVWQKPPQYDAQLAIQARGHIMFSLLVHLLITAHWYYGWPFDNTYLSSDGVY-KYQDKNSYNLVKSGKF 644
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2PG83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG83_9STRA) HSP 1 Score: 132 bits (332), Expect = 4.090e-33 Identity = 72/214 (33.64%), Postives = 119/214 (55.61%), Query Frame = 1
Query: 124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEA---PNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYL-AIALVIHVMVSLQFYAGWPFDGLC 753
A +IAV N + P+ I K SL KI + +W+NTA ++ ++ +D I I + +A+ T PL + D+ ++ +AP A T+ + N+ F G+ LAERY ++ K +F+C F++ I+P G+FV ++A+F+TY++ K+CL WK +P M + +A +R YL I LV+ V+VS +AG+P+D LC
Sbjct: 2 ALWIAVLNVITPQ----ICKFIVGFEQHPDEGDKSLSLYTKITIFRWVNTAIVLSMATPFADTLGGDEDDLIPSIYNVFFAELVTVPLTALSDIGGHVSRHFVAPRAVTEEETNACFKGAEYELAERYTTVTKLLFLCFFFATIYPMGFFVCALALFVTYFTDKFCLLRVWKPAPQMGNEIAEFSRSYLYTIMLVLLVLVSAYQFAGFPYDNLC 211
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835YQN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN9_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.940e-32 Identity = 79/247 (31.98%), Postives = 128/247 (51.82%), Query Frame = 1
Query: 10 PHRRRLFEFVRGGVLGAGIVCLVALIIYILAE--SEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFD 744
P+R R + + +L +V + Y + ++A+G A + + NA LP I H + +LM K++ ++MNTA I YF E + + + ++ +DAF P + ++D RF + VL+ + TQ MNSYF+GS L ERY S+LKT+ V LFY+AI+P G F AS T++ +Y L W+ +P + LA + +++H++V+ +YAGWPFD
Sbjct: 444 PNRARALQSLAATLLTGAVVAGSYWVFYAIMHDNADASGLAIVVTLINAALPTACYAI----NALQSFYDHGDRQGALMAKLIATRFMNTALISYFTTPPGETLSYTRLMAVQSLMVSDAFITPALAIVDAVPRFYRRVLSRASTTQRLMNSYFLGSAWDLGERYTSMLKTVIVALFYAAIYPAGCFFASFCFLATFFIDRYKLVREWRSAPAYDAQLAWRAHNVIIGCILLHLLVTSSWYAGWPFD 686
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S1VPA4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPA4_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.170e-31 Identity = 74/228 (32.46%), Postives = 121/228 (53.07%), Query Frame = 1
Query: 139 VNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEA---PNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYL-AIALVIHVMVSLQFYAGWPFDGLC-PTDEVVQVNFWDEANVNF 807
V N+++P I+K + + SL LKI L +W+NTA + + + + D + IS ILW++ + P +++LD+ K++VL P AKTQ MN ++ G+ L ERY K MF+C FYSA+FP +F + M Y+ KYCL W +P + LAV +RRY ++AL+ +V+ +A +P+D +C +D + D N+++
Sbjct: 365 VFNSIIP----VIVKLLLLIENHNDEGSRQQSLYLKITLFRWVNTAILTRIVTPFTGTIGGVDTDVLPTISAILWSELWLSPALRILDIMGNLKKHVLGPRAKTQESMNLWYQGTVYNLGERYTDFTKVMFLCFFYSALFPGSFFFCGAILLMQYYVDKYCLMRIWSTAPFIGSQLAVFSRRYFFSLALLAFAVVAAYSWAQFPYDNVCFGSDTGFAATYTDVQNLHW 588 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14614.3545.1 >prot_Ecto-sp13_S_contig14614.3545.1 ID=prot_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp MPQPHRRRLFEFVRGGVLGAGIVCLVALIIYILAESEATGAAAFIAVNNAback to top mRNA from alignment at Ecto-sp13_S_contig14614:301..4135- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14614.3545.1 ID=mRNA_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14614:301..4135- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14614:301..4135- >mRNA_Ecto-sp13_S_contig14614.3545.1 ID=mRNA_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14614:301..4135- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |