mRNA_Ecto-sp13_S_contig14614.3545.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14614.3545.1
Unique NamemRNA_Ecto-sp13_S_contig14614.3545.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: D7FW06_ECTSI (PHM7_cyt domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW06_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 7.660e-172
Identity = 266/273 (97.44%), Postives = 270/273 (98.90%), Query Frame = 1
Query:   19 RRLFEFVRGGVLGAGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST 837
            RRLFEF+RGGVLGAGIVCLVALIIY+LAESEAT AAAFIA+NNAVLPKVMM IM XXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVAS+AMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST
Sbjct:  563 RRLFEFIRGGVLGAGIVCLVALIIYLLAESEATVAAAFIAINNAVLPKVMMAIMXXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASMAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMFNVST 835          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835YVZ1_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ1_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.180e-59
Identity = 115/252 (45.63%), Postives = 164/252 (65.08%), Query Frame = 1
Query:   28 FEFVRGGV---LGAGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDG-LCPTDEVV 771
            +  +  GV   + AGI+ ++A +IY+ ++++   AA FI+V N VLP ++  +++         T S  ++SL+LKIV+ QWMNTAFIIY I    E     +I+QIS     D +  P++ +LD+P R  + VL+  A  Q KMNSYF+GS   LAERYAS+LKT FV LF+SA+FP GYF+A++A+F+TYW +KYCL   W   PPM   LA  +R YLA+A+++ ++V+L FYA WPFD  LC T E V
Sbjct:  429 YRLIEQGVTLAITAGIIAVLAALIYLTSKADNALAAIFISVVNKVLPILIKLVVRKEHHL----TDSGLQSSLLLKIVILQWMNTAFIIYIITPSDEFLTRGFIDQISN----DVYVSPVIMLLDIPGRLSRLVLSRTAHNQLKMNSYFIGSPWFLAERYASMLKTAFVALFFSALFPAGYFIAALALFVTYWVNKYCLLRLWATPPPMGAFLAQLSRSYLALAVLVKLLVTLNFYANWPFDNELCKTGETV 672          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835ZBF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF6_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.020e-52
Identity = 101/198 (51.01%), Postives = 139/198 (70.20%), Query Frame = 1
Query:   58 AGIVCLVALIIYILAESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMND 651
            A +V + ALII+  +  +   +AAFI+++N VLP    TI+K         T S  ++SL++KI++ QWMNTAFIIY I    +   E+Y+ QISK    DAFTQP++ +LDLP +   YVLAPMAK+Q KMNSYF+GS   LAERY+++LKT+FV L++SAIFP GYF+A++AMF+ YW +KYCL   W+  PPM+D
Sbjct:  306 AVLVGISALIIWATSLVDPVFSAAFISISNTVLP----TIIKMITAKEHHLTDSAQQSSLLMKIIMVQWMNTAFIIYIIRPRPDLLTEEYVAQISK----DAFTQPILLLLDLPGKLSHYVLAPMAKSQLKMNSYFLGSGWFLAERYSNMLKTVFVALYFSAIFPAGYFIAALAMFINYWVNKYCLLRIWRTPPPMSD 495          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2WAC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAC1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.500e-41
Identity = 80/220 (36.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFI--NSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQV 777
            A  I++ N VLP++   +++         T S  E S + K V  +W  +  I+Y +  +  ++     YI QI K+L ADA T P+++V D+    K+Y+LAP+A T A+  +   G+  +LAERY  L KT+ + LFYSAI P GY+ +++A F+++W  K+C+   +++ PP  D L   TR  +A+ ++IH +++  FY GWP+D LCPT ++V V
Sbjct:  208 AIMISLWNGVLPEINRVLVQTFESHH---TWSDVEDSFLTKTVACRWFTSTLILYIVALSDPTQFLGVYYIQQIQKVLLADALTNPIIRVCDVSGNLKRYILAPIAGTDARAKALNEGTDWLLAERYTDLAKTILMSLFYSAILPTGYWYSALACFISFWVDKFCILRLFRQKPPSGDKLVRITRTTIAVIILIHCVITAHFYYGWPYDELCPTKQLVNV 424          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2WAU7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAU7_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.480e-40
Identity = 80/220 (36.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFI--NSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQV 777
            A  I++ N VLP++   +++         T S  E S + K V  +W  +  I+Y +  +  ++     YI QI K+L ADA T P+++V D+    K+Y+LAP+A T A+  +   G+  +LAERY  L KT+ + LFYSAI P GY+ +++A F+++W  K+C+   +++ PP  D L   TR  +A+ ++IH +++  FY GWP+D LCPT ++V V
Sbjct:  480 AIMISLWNGVLPEINRVLVQTFESHH---TWSDVEDSFLTKTVACRWFTSTLILYIVALSDPTQFLGVYYIQQIQKVLLADALTNPIIRVCDVSGNLKRYILAPIAGTDARAKALNEGTDWLLAERYTDLAKTILMSLFYSAILPTGYWYSALACFISFWVDKFCILRLFRQKPPSGDKLVRITRTTIAVIILIHCVITAHFYYGWPYDELCPTKQLVNV 696          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2MCA3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCA3_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.430e-37
Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 1
Query:  166 MMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRR-YLAIALVIHVMVSLQFYAGWPFDGL 750
            +++IMK         T +  EA+L+ K+VLA+W  +  I Y +   S     + I  +  IL  DA   P+V++ D    F  YV AP +KTQ  MN  F G+   LAER+A L KT+ +C+ +SAI PQ YF+  +A+ + YW+ KYCLF  W+  PPM DS  V+T R  L+I +V H   +L + AGWPFD +
Sbjct:  550 LLSIMKEINKKEPHPTKTRQEAALLFKLVLARWAISGVIFYVVTDWSSTVKAENIKALVAILLTDAIMNPVVRLCDFGGLFLTYVKAPASKTQEGMNECFKGAEWFLAERFADLSKTILICMCFSAIVPQSYFITGLAVTVNYWADKYCLFRIWQ-VPPMIDSTIVATARTQLSITVVFHCFYTLHYIAGWPFDSV 744          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2V6J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6J7_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.870e-33
Identity = 80/242 (33.06%), Postives = 127/242 (52.48%), Query Frame = 1
Query:  100 AESEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGLCPTDEVVQVNFWDEANVNFTIDGMF 825
            A+S ATG    ++V N +LP V+  I                + SL LK   A++MNTA I + I    +  +   I  I  IL +DA   P V ++D+    K+  L+  AKT AK+   F G+   L ERY  + KT+FV +FY+A+FP G +VA++    TYW+ KY L   W++ P  +  LA+  R ++  +L++H++++  +Y GWPFD    + + V   + D+ + N    G F
Sbjct:  410 AKSTATGLV--VSVINVLLPIVLRMITMVEKHVD----QGNKQDSLFLKTTAARFMNTAIINFMITDFHDTLDAAAIKTIMSILISDAIITPTVGLIDISGNLKRLFLSKFAKTHAKLEKNFQGTPWNLGERYTGMSKTLFVAMFYAALFPPGLWVAALCFAYTYWADKYLLLRVWQKPPQYDAQLAIQARGHIMFSLLVHLLITAHWYYGWPFDNTYLSSDGVY-KYQDKNSYNLVKSGKF 644          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S2PG83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PG83_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.090e-33
Identity = 72/214 (33.64%), Postives = 119/214 (55.61%), Query Frame = 1
Query:  124 AAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEA---PNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYL-AIALVIHVMVSLQFYAGWPFDGLC 753
            A +IAV N + P+    I K                SL  KI + +W+NTA ++      ++      +D I  I  + +A+  T PL  + D+     ++ +AP A T+ + N+ F G+   LAERY ++ K +F+C F++ I+P G+FV ++A+F+TY++ K+CL   WK +P M + +A  +R YL  I LV+ V+VS   +AG+P+D LC
Sbjct:    2 ALWIAVLNVITPQ----ICKFIVGFEQHPDEGDKSLSLYTKITIFRWVNTAIVLSMATPFADTLGGDEDDLIPSIYNVFFAELVTVPLTALSDIGGHVSRHFVAPRAVTEEETNACFKGAEYELAERYTTVTKLLFLCFFFATIYPMGFFVCALALFVTYFTDKFCLLRVWKPAPQMGNEIAEFSRSYLYTIMLVLLVLVSAYQFAGFPYDNLC 211          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A835YQN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.940e-32
Identity = 79/247 (31.98%), Postives = 128/247 (51.82%), Query Frame = 1
Query:   10 PHRRRLFEFVRGGVLGAGIVCLVALIIYILAE--SEATGAAAFIAVNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFD 744
            P+R R  + +   +L   +V     + Y +    ++A+G A  + + NA LP     I            H   + +LM K++  ++MNTA I YF     E  +   +  +  ++ +DAF  P + ++D   RF + VL+  + TQ  MNSYF+GS   L ERY S+LKT+ V LFY+AI+P G F AS     T++  +Y L   W+ +P  +  LA      +   +++H++V+  +YAGWPFD
Sbjct:  444 PNRARALQSLAATLLTGAVVAGSYWVFYAIMHDNADASGLAIVVTLINAALPTACYAI----NALQSFYDHGDRQGALMAKLIATRFMNTALISYFTTPPGETLSYTRLMAVQSLMVSDAFITPALAIVDAVPRFYRRVLSRASTTQRLMNSYFLGSAWDLGERYTSMLKTVIVALFYAAIYPAGCFFASFCFLATFFIDRYKLVREWRSAPAYDAQLAWRAHNVIIGCILLHLLVTSSWYAGWPFD 686          
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Match: A0A7S1VPA4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPA4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.170e-31
Identity = 74/228 (32.46%), Postives = 121/228 (53.07%), Query Frame = 1
Query:  139 VNNAVLPKVMMTIMKXXXXXXXXXTHSTYEASLMLKIVLAQWMNTAFIIYFINSISEA---PNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAKMNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWSSKYCLFYRWKRSPPMNDSLAVSTRRYL-AIALVIHVMVSLQFYAGWPFDGLC-PTDEVVQVNFWDEANVNF 807
            V N+++P     I+K            + + SL LKI L +W+NTA +   +   +      + D +  IS ILW++ +  P +++LD+    K++VL P AKTQ  MN ++ G+   L ERY    K MF+C FYSA+FP  +F     + M Y+  KYCL   W  +P +   LAV +RRY  ++AL+   +V+   +A +P+D +C  +D      + D  N+++
Sbjct:  365 VFNSIIP----VIVKLLLLIENHNDEGSRQQSLYLKITLFRWVNTAILTRIVTPFTGTIGGVDTDVLPTISAILWSELWLSPALRILDIMGNLKKHVLGPRAKTQESMNLWYQGTVYNLGERYTDFTKVMFLCFFYSALFPGSFFFCGAILLMQYYVDKYCLMRIWSTAPFIGSQLAVFSRRYFFSLALLAFAVVAAYSWAQFPYDNVCFGSDTGFAATYTDVQNLHW 588          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14614.3545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW06_ECTSI7.660e-17297.44PHM7_cyt domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YVZ1_9STRA1.180e-5945.63PPIase cyclophilin-type domain-containing protein ... [more]
A0A835ZBF6_9STRA1.020e-5251.01Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WAC1_9STRA5.500e-4136.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WAU7_9STRA1.480e-4036.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MCA3_9STRA2.430e-3740.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2V6J7_9STRA2.870e-3333.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2PG83_9STRA4.090e-3333.64Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A835YQN9_9STRA1.940e-3231.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VPA4_9STRA1.170e-3132.46Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14614contigEcto-sp13_S_contig14614:301..4135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score508.1
Seed ortholog evalue2.7e-141
Seed eggNOG ortholog2880.D7FW06
Model size840
Hectar predicted targeting categorysignal anchor
Exons6
EggNOG OGs28PFW@1,2QW3U@2759
Cds size840
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14614.3545.1prot_Ecto-sp13_S_contig14614.3545.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14614 301..4135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462780.8353913-CDS-Ecto-sp13_S_contig14614:300..3751681462780.8353913-CDS-Ecto-sp13_S_contig14614:300..375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 301..375 -
1681462780.849486-CDS-Ecto-sp13_S_contig14614:794..9621681462780.849486-CDS-Ecto-sp13_S_contig14614:794..962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 795..962 -
1681462780.86241-CDS-Ecto-sp13_S_contig14614:1256..14091681462780.86241-CDS-Ecto-sp13_S_contig14614:1256..1409Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 1257..1409 -
1681462780.8729079-CDS-Ecto-sp13_S_contig14614:2320..24281681462780.8729079-CDS-Ecto-sp13_S_contig14614:2320..2428Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 2321..2428 -
1681462780.8946354-CDS-Ecto-sp13_S_contig14614:3040..31481681462780.8946354-CDS-Ecto-sp13_S_contig14614:3040..3148Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 3041..3148 -
1681462780.904151-CDS-Ecto-sp13_S_contig14614:3907..41351681462780.904151-CDS-Ecto-sp13_S_contig14614:3907..4135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14614 3908..4135 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14614.3545.1

>prot_Ecto-sp13_S_contig14614.3545.1 ID=prot_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
MPQPHRRRLFEFVRGGVLGAGIVCLVALIIYILAESEATGAAAFIAVNNA
VLPKVMMTIMKKPGGGEHHHTHSTYEASLMLKIVLAQWMNTAFIIYFINS
ISEAPNEDYINQISKILWADAFTQPLVKVLDLPNRFKQYVLAPMAKTQAK
MNSYFMGSHVVLAERYASLLKTMFVCLFYSAIFPQGYFVASVAMFMTYWS
SKYCLFYRWKRSPPMNDSLAVSTRRYLAIALVIHVMVSLQFYAGWPFDGL
CPTDEVVQVNFWDEANVNFTIDGMFNVST*
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mRNA from alignment at Ecto-sp13_S_contig14614:301..4135-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14614.3545.1 ID=mRNA_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14614:301..4135- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCCAACCCCACCGCAGGAGGCTTTTCGAGTTCGTCCGAGGAGGCGT GCTCGGAGCGGGGATCGTCTGCCTCGTGGCGTTGATCATCTACATTCTGG CCGAGAGCGAGGCGACCGGGGCCGCCGCCTTCATCGCCGTGAACAACGCC GTGCTGCCCAAGGTGATGATGACCATCATGAAGAAGCCCGGCGGGGGCGA GCACCACCACACGCACTCCACCTACGAGGTATGTATGTACGTACTTCTAC GCGCGTTATTGGCTTCAAAGACGAAAAGAACTTGGAAAAGGGAGGTAACA GAGTGCCTCAAATTGGTGAAAGGGGAAGCGAAGGAAAACAGTGTCTGGCG GTTCCGCTTCTACATCGCCCGTTCGGGGCATCGGTGTCCGTTTCCACCGT GGCCAGGGTCGGGTATTTGGTGTTGAGGGAATCTGCGCTTTGCAATGTTT GAGCATCTGTTGTGCATGTCAAGACCGTAGACGATGGCTGCGACGGTGGT GACTGGTCGCTCGTGGCGTGCTAGCGTACGTCAAAGCGGTTGTTAATAGC GCGCTTGGGTGGGCGGGAGGATTGCTACGACAGAATACATGTTCCCCCTT GTCTTGGTGCGTTCAGGGCAGTGCTTTGGGGTGGTTGTCGTTCGCGACAT TTTTTTGTTGGTGTTTGTTTTTGAATAATAAAAACGCGTGCACACGTGCT GTTGCTCATCGAGGTCAGGGGCATCAACTGCGCCGCACATACCGCAGGGG AGCACTCCAAGTGTAGCAGCAATTGTCTTGACGTTTCCTGCTAGCATTCG TGCTGTTTTATATAGCGCACAGGACGAATGTCAAGCGCACATGCCCTGCG AAAACACGGACAGTAGCACGTCTGGCTGTTGGCTGGCCGTGAGGAAGGTG TAGAACCTGCAGGTGGTTTGTTGGCGGCCCATGCACGACGTATAGCAATG CGTGACGGTCGTCCTGTTGTTATGGTGGGGCGAACAGGCGTCCCTGATGC TCAAGATCGTGCTGGCGCAGTGGATGAACACGGCCTTCATCATCTACTTC ATCAACAGCATCTCCGAGGCGCCCAACGAGGATTACATCAACCAGGTTAG GTTATCAGAGAGAAAAAGTCACTGTTGTTGGCTGTTGCGTGTTTGCTGTT CGGCCAATGGCGTTTTGCGCGTGTAGTTGTCGGTTCGTCGTGTCTCAATG GGCGCTGTTAAAACGCCATTTACGTACGCGCGGACGGTGGCGTCCCTTGC CTCCGTCGTCTCGGGGCGTCACTTTCAGTCTACGGCGGCACGCGATGGGT GTCAAGCCTGTGCGTGTTGCTGGTCTTCGCGGCGGTGTGTTTCGGCATGT GTGTGTGCATTGTACGTCGGAATGCACCTCTGCTGTCGGGGCAATGTGCC GCCCAGGGTCAGCGTGTGTCCTTGCTCCTATGATACATGCGTCCATTTTG TTTCTGTACATCAGGGGGCACCCGAGCTTCATCCTCGTACTCCCTTTTCT CACCTTGGGTCATTTTGTTTTCGCCGTATCGTTGTTGCTCGCTGCATCAT CCAATCACATCACTCCAACGGGGTGTCATCCACCTAAGTCCGTGTAGCGA TTGGTCTCGTTTATCAACTGATTTTTTTATTTTGTTTGTGAGCCACTCAA GTCCACCCGAACGCCGGCTCGAATGTGAATGTGTCGCCCCAACCGAACGA TGGACAGATTTCCAAGATTTTGTGGGCAGACGCCTTCACGCAGCCCTTGG TCAAGGTGCTGGACCTACCCAACAGGTTCAAGCAGTACGTCCTCGCTCCG ATGGCGAAGACCCAGGTTAGTTTTTGACGCCAGGGCAGCAGCAATGCCGG GAGTCACGAGTTCGGGTGTGAGATAGCTTTCGAGATCAGCGGCATCGGCG GCAAGAATATGTGGATGTTCCTTGGGAGTGGGCAGTTTCACGAAGTCTCC ATTTGCGGCCGTTCGGGGTTTGTTGTTTTGAGGAAGCACGACAGTTGTGT TTTCCGTGGATGCAGCGCGAACGACCCTTGAGGGTACGGTTTAGGGAGTG AGATGGTTCTCGAGATCAACGGCGGCGTCGAGAGTCTCGCAACTACGTTG GTGGTCCTCGGGGACATGCACGTTGGCAGTAGCCTATCGATAACTGACTG TTGTTTCGAGTGAAGAAGGCTGTATGGTCAGATTTGCAGTTTTCCGTTGT CGTTGGCTGAGGTTTTCGCTGGACTCTTGGAGTCAAGAACATGTAAGCTG TGTGAGCTGTTGAGCTTGGGAAACGTCGGACCGCAGGTAGCGGTCAGCGG TGGGTTAGTCCCGCTCCTACTTCTGTTAAGCTTTTACAACCCCTTTGACG ACACAGCAGTGGTCTCAGGAGCCCACGGCGGAGGGATCACTGGTAAGCGC GACAGTTGTGTGTTCCCCGTCGATGCAGCGCGACCATCGGTCGTGACCCG GAATGTCCGGTCATTGGCTCCTGTGTGTCGTGGTGAAGCCAGAGCACTCA TGCTGGTGCGTTCACGCTTCGACGATGAGCCTGTTGTTGTTTTCCCTTGT GTTGTTGTGTTCCCTTGTCAAAATGAACCAAACTCTTTTGACCCGAGGTG TGCGTGTGGTGTGTGCATGTTAACAACGTGTTTTTGCGCGGTCGTCCAGA CGAAGATGAACACTTTGACCCGTGGTGTGCGTGTAGTGTATGCATGTTTA CCACGTATTGTTGCACGGTCGTCCAGGCGAAGATGAACTCGTACTTCATG GGCTCGCACGTGGTGCTGGCAGAGCGCTACGCCAGCCTCCTCAAGACCAT GTTCGTGTGCCTCTTCTACTCGGCAATCTTCCCGCAAGGCTACTTCGTGG CCTCCGTGGCCATGTTCATGACCTACTGGGTGAGGATTGAGATGGCCGCA TCGGTAGCAGATGTTTTGTCCATGTTGCAGCCCGTACCATCTTGATAGAT GGTATCCCTGTCATCTACTTTCTAACGACGATTGTGCGCACCCACATGAC CACGAACATCCCCAGCGTTTGTCGATCATCTCTGCCCATGCCGTCCCGAC TTGAAGAAGGTTTTGTACTTCACGATTTTTTGAGAAAATATGCGATTTAC CACACGCGCGAAGAGAACGAATGAACTAAATTAGACCGGTATGTGTCGCC AACCGCCCTGTGTGTCGAAACAGTCGAGCAAGTACTGCCTCTTCTACCGG TGGAAGAGATCGCCCCCCATGAACGACTCGCTGGCGGTGTCTACCCGGCG CTACCTGGCCATCGCCTTGGTTATCCACGTCATGGTGTCGCTGCAGTTCT ACGCGGGGTGGCCGTTCGACGGCCTCTGCCCCACGGACGAGGTGGATGAA GATGTTTGTTATTGTTGTCGTTGTTATTGGCTTGACATGGCGAGGTTCGC TCCACCCCCTCTGGGTACAAACCTGAACGCCTGCTTTCCCGAAAACGTGG TTGAATTGTGCCACGATGCTCTGCGGTGCACGTATACACATGGGACGTTC CGCCGGGAGTTCCGATTTTTCCATATTGTTTTTGCCCAGCCTAGTTTGGA AACAGTGAGGTTTCCTGCTGCGATCAGCTGGAGGCTGCAACTTTGATTTG CCTCACGTATCTCCACCTCTCTTGCTGATTCTCCCGACGCCACCGTGGTA TGCACACCTCTCTCGTATTGTATGACTTGTCCTTCCCGGTCTTTCTTGGT CCCCCCCTCACTTGCGATCTACCGCTTTTCGATAACTTGTTGAACAATCG ACGCGGGCAGGTGGTGCAGGTTAACTTCTGGGACGAAGCGAACGTGAACT TCACGATCGACGGCATGTTCAACGTTTCCACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14614:301..4135-

>mRNA_Ecto-sp13_S_contig14614.3545.1 ID=mRNA_Ecto-sp13_S_contig14614.3545.1|Name=mRNA_Ecto-sp13_S_contig14614.3545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14614:301..4135- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCCAACCCCACCGCAGGAGGCTTTTCGAGTTCGTCCGAGGAGGCGT
GCTCGGAGCGGGGATCGTCTGCCTCGTGGCGTTGATCATCTACATTCTGG
CCGAGAGCGAGGCGACCGGGGCCGCCGCCTTCATCGCCGTGAACAACGCC
GTGCTGCCCAAGGTGATGATGACCATCATGAAGAAGCCCGGCGGGGGCGA
GCACCACCACACGCACTCCACCTACGAGGCGTCCCTGATGCTCAAGATCG
TGCTGGCGCAGTGGATGAACACGGCCTTCATCATCTACTTCATCAACAGC
ATCTCCGAGGCGCCCAACGAGGATTACATCAACCAGATTTCCAAGATTTT
GTGGGCAGACGCCTTCACGCAGCCCTTGGTCAAGGTGCTGGACCTACCCA
ACAGGTTCAAGCAGTACGTCCTCGCTCCGATGGCGAAGACCCAGGCGAAG
ATGAACTCGTACTTCATGGGCTCGCACGTGGTGCTGGCAGAGCGCTACGC
CAGCCTCCTCAAGACCATGTTCGTGTGCCTCTTCTACTCGGCAATCTTCC
CGCAAGGCTACTTCGTGGCCTCCGTGGCCATGTTCATGACCTACTGGTCG
AGCAAGTACTGCCTCTTCTACCGGTGGAAGAGATCGCCCCCCATGAACGA
CTCGCTGGCGGTGTCTACCCGGCGCTACCTGGCCATCGCCTTGGTTATCC
ACGTCATGGTGTCGCTGCAGTTCTACGCGGGGTGGCCGTTCGACGGCCTC
TGCCCCACGGACGAGGTGGTGCAGGTTAACTTCTGGGACGAAGCGAACGT
GAACTTCACGATCGACGGCATGTTCAACGTTTCCACGTGA
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