prot_Ecto-sp13_S_contig14603.3534.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14603.3534.1
Unique Nameprot_Ecto-sp13_S_contig14603.3534.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length396
Homology
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: D8LDN2_ECTSI (General transcription and DNA repair factor IIH helicase subunit XPD n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN2_ECTSI)

HSP 1 Score: 684 bits (1765), Expect = 2.560e-240
Identity = 385/396 (97.22%), Postives = 387/396 (97.73%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAG      GGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXX  EVA AADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAF+HRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFAT+VGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV
Sbjct:  108 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAG------GGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAAAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFVHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATLVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 497          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A836CJZ4_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ4_9STRA)

HSP 1 Score: 525 bits (1353), Expect = 3.000e-177
Identity = 273/428 (63.79%), Postives = 319/428 (74.53%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGG--------------------------------ELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRNLCIH+RV+E++DREAVDGACRDMTASWVR++A   R  GG  G                                 ELC+F+E Y ANGSD+ MP+GIYS++DLK+FG+EKGWCPYFLARH+INHAN+LVYNYQYMLDPKVAG+VSRELEAESVVVFDEAHNIDNVCTEALSV L++ +L+AASRCLG++SSKV +MK+ DQ RLN EYQRLV+GLAD+  G    GV G                                   +A + + ANPALPAD+L EAVPGNIRRAEHFVSF+RK++EH K R+R  +VESETPLAF+HR+QQ T +ERKPL+F YSRLNSLLRTLEVT LDDFRPL  VADFAT+V TY EGFA+VIEP GSV+PGVYEPV++LACLDASLAI+PVFERF SV
Sbjct:  108 CLSSRRNLCIHQRVLEDADREAVDGACRDMTASWVRQRAGVKRDKGGARGANGXXXXXXXXXXXXXXXXXXXXAQGGEVDASIELCQFYEEYDANGSDSVMPSGIYSIEDLKDFGREKGWCPYFLARHVINHANILVYNYQYMLDPKVAGLVSRELEAESVVVFDEAHNIDNVCTEALSVQLNRHNLEAASRCLGRVSSKVTDMKQHDQRRLNEEYQRLVNGLADNAAGPLPAGVQG-----------------------------------IADNNMLANPALPADVLAEAVPGNIRRAEHFVSFLRKLIEHLKVRIRATNVESETPLAFLHRLQQNTTIERKPLRFTYSRLNSLLRTLEVTNLDDFRPLSAVADFATLVATYQEGFAIVIEPEGSVIPGVYEPVLQLACLDASLAIKPVFERFGSV 500          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: K8YZX4_NANGC (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZX4_NANGC)

HSP 1 Score: 483 bits (1244), Expect = 2.690e-160
Identity = 254/399 (63.66%), Postives = 305/399 (76.44%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSG-LGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPA--LPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRNLCIHERV+EESDREAVD ACR MTASWVR++             ELC+++E Y  NG+DA + +GIYSLDDLKE GK++GWCPYFLARHIINHAN+L+YNYQY+LDPKVAG+VS+ELEAES+VVFDEAHNIDNVC EALSV+LD+RSLD A+RCLGK+S++V++MK+ D  +LN EYQRLV GLA+SG LG A+G  AGSAA                                  ADA+ ANP   LP  + QEAVPGNIRRAEHF++FM+KVVEH KT +RV S + ++PLAF+H +Q  TALE KPL+F YSRLNSLLRTLEVT LD+F PL DVADFAT+V TY EGF V+ EP GS +PG+ +PV++L+CLDASLAI+PVFERF SV
Sbjct:  109 CLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGAT------SANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAG--AGSAASP--------------------------------ADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSV 467          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A7S2GG08_9STRA (DNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG08_9STRA)

HSP 1 Score: 458 bits (1178), Expect = 6.510e-155
Identity = 242/400 (60.50%), Postives = 287/400 (71.75%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRV----RVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+CIHE V+E +DREAVD  CRDMTASWVR+KA+A       G  E C+F+E Y   GSDAA+PNGI+SLDDLK  G+EKGWCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L  IS+KV E+K  D +RL  EY+RLV+GL D   G+                                             D I ANP+LPAD+L EAVPGNIRRAEHFVSF+R ++ H + R+       +VE+ETPLAF+HR+   T  E KPLKFAYSRLNSLLRTLEVT LD + PL DV D  T+V TY++GFA+VIEP GS++PGVYEP ++LACLDAS+AI+PVFERF+SV
Sbjct:  151 CLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQAS-----PGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDGAGGQT--------------------------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSV 501          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A7R9U4D1_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4D1_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 4.970e-153
Identity = 237/396 (59.85%), Postives = 292/396 (73.74%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+CIH+RV+EESDREAVD ACR MTASWVRK+A+ G         ELCEF+E Y ANG+D A+P GIYSL+DL++ G+E+GWCPYFLARH++ HANVL+YNYQYMLDPKVAG+VS ELE +SVVVFDEAHNIDNVC EA+SV + +  LDA++R LG ++SKV EMK +D  RLNAEYQRLVSGLA SG    S                                        VA D+I +NP+LPADIL E+VPGNIR+AEHF++FMRK+V H K ++R    + ETP AF+H++ ++T LE KP+KF YSRLNSLLRTLEVT LDD   L ++ADFAT++ TY EGFAVV+EP  S++PG+ EPV+ L+CLDASLAI+PVF+RF SV
Sbjct:  152 CLSSRRNMCIHDRVLEESDREAVDAACRSMTASWVRKRAQEGASV------ELCEFYEQYDANGTDTAIPYGIYSLEDLRDLGRERGWCPYFLARHVLKHANVLIYNYQYMLDPKVAGLVSSELEEDSVVVFDEAHNIDNVCIEAMSVQISRPILDASTRSLGALASKVEEMKASDVERLNAEYQRLVSGLAMSGPAPGS--------------------------------------YTVATDSILSNPSLPADILAESVPGNIRKAEHFLTFMRKIVRHLKDQLRNPEAKWETPQAFLHQLHEMTGLEAKPMKFTYSRLNSLLRTLEVTSLDDHSDLAEIADFATLLATYQEGFAVVLEPDSSIIPGLTEPVLELSCLDASLAIKPVFKRFKSV 503          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A7S2D9H7_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9H7_9STRA)

HSP 1 Score: 458 bits (1178), Expect = 6.630e-151
Identity = 242/400 (60.50%), Postives = 287/400 (71.75%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRV----RVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+CIHE V+E +DREAVD  CRDMTASWVR+KA+A       G  E C+F+E Y   GSDAA+PNGI+SLDDLK  G+EKGWCPYFLARH+INHA VLVYNYQYMLDPKVAGMVSRELE+ESVV+FDEAHNIDNVC EALSV LD+RS+ AA + L  IS+KV E+K  D +RL  EY+RLV+GL D   G+                                             D I ANP+LPAD+L EAVPGNIRRAEHFVSF+R ++ H + R+       +VE+ETPLAF+HR+   T  E KPLKFAYSRLNSLLRTLEVT LD + PL DV D  T+V TY++GFA+VIEP GS++PGVYEP ++LACLDAS+AI+PVFERF+SV
Sbjct:  151 CLSSRRNMCIHETVMEAADREAVDSLCRDMTASWVRQKAQAS-----PGSVETCDFYEEYDKAGSDAAIPNGIFSLDDLKVLGREKGWCPYFLARHVINHAKVLVYNYQYMLDPKVAGMVSRELESESVVIFDEAHNIDNVCIEALSVALDRRSITAAHQSLDAISTKVREVKTRDASRLQDEYRRLVAGLNDGAGGQT--------------------------------------------DTILANPSLPADVLSEAVPGNIRRAEHFVSFLRTILTHLEQRMISTAENDTVETETPLAFVHRLCGDTHHEIKPLKFAYSRLNSLLRTLEVTSLDQYNPLQDVTDLITLVATYSKGFAIVIEPNGSIIPGVYEPTLQLACLDASIAIKPVFERFSSV 501          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A2P4X6T2_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6T2_9STRA)

HSP 1 Score: 418 bits (1075), Expect = 8.450e-139
Identity = 219/397 (55.16%), Postives = 280/397 (70.53%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+C+H RV+  +D E VDG CR MTASWVR +A   R  G +   E C F+E Y A  SD   +P+G+YS++DLKE G +KGWCPYFL R+++  A+V+VYNYQYMLDPKV+ +VSR  E ES+VVFDEAHNIDNVC EALSVDLD+RSLD ASR L  +SS+V ++K+ D++RL+AEY+RLV GL      R+S  V                                   +  A D + ANP LP D+L EA+PGNIRRAEHFV+FMR+++E+ + R+RV+ VESETP AF+H + Q   +E KP+KF Y+RLNSLLRTLEVT L+++  L DVADFAT+V TY EGF ++IEP  S   GV++PV++L+CLDASLAIRPVFERF+SV
Sbjct:  107 CLSSRRNMCVHPRVMAHADGEDVDGQCRQMTASWVRARAAKAREEGEQMQVETCSFYENYDARKSDDTVLPSGVYSVEDLKEIGAQKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGL------RSSNAVVAPT----------------------YTDPTTNNAIDTANDILIANPVLPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSV 474          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A7S2P3V6_9STRA (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3V6_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 4.490e-138
Identity = 225/407 (55.28%), Postives = 288/407 (70.76%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDA-AMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGL--GRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQS-----VESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEG---FAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+C+H+RV+ ESDREAVD ACR MTASWV +KA+        G  E C FF+ +SA+G +  ++P+GI+ L+ L+++GK+KGWCPY+L R  INHAN+LV+NYQYMLDPKVA MVS ELEAES+VVFDEAHNID+VC EALSVD+ +RSLD A+R LG++SS+V+ +K +D++RL  EY  LV+GL D GL    A+ G  GS                                             L  D+L EAVPGNIRRAEHF++FM+K+VEH K R+R  +     V+SETPLAF+HRM   T+LE KPLKFAYSRL+SLL+TL+V+ LDDF  L DVADFAT++ TY+EG   FA+++EP GS +PG+ EPV++LACLDASLAI P+F+RFASV
Sbjct:  208 CLSSRRNMCVHDRVVNESDREAVDSACRSMTASWVLEKAKQE-----PGSVETCSFFDSFSADGGEGTSLPSGIFDLEQLRQWGKDKGWCPYYLTRRAINHANILVFNYQYMLDPKVAKMVSAELEAESIVVFDEAHNIDSVCIEALSVDIHERSLDQATRSLGRLSSEVSRIKASDRSRLQNEYANLVNGLIDQGLIARPANDGSLGSNT-------------------------------------------LSTDVLNEAVPGNIRRAEHFIAFMKKIVEHLKARLRSVAGPNGGVQSETPLAFLHRMMNSTSLEAKPLKFAYSRLSSLLQTLQVSNLDDFNALTDVADFATLLSTYSEGVARFAIIMEPNGSAIPGMLEPVIQLACLDASLAIAPLFKRFASV 566          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: A0A8K1FGF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF4_PYTOL)

HSP 1 Score: 420 bits (1079), Expect = 2.430e-137
Identity = 220/399 (55.14%), Postives = 283/399 (70.93%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSDA-AMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAV--AADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+C+H RV+  +D EAVD  CR MTASWVR +A  G         ELC ++E Y +  SD   +P GIYS+DDLKE G  KGWCPYFL R+++ +A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  IS++V +MK+ D+ARL+AEY+RLV GL      R+S  V                                A + A+  + D + ANP LP D+L EA+PGNIRRAEHF++FMR+++E+ +TR+RV++VESETP AF+H + Q  A+E KP+KF Y+RLNSL+RTLE+T L+++  L DVADFAT+V TY EGF ++IEP   V  G ++PV++LACLDASLA+RPVFERF+SV
Sbjct:  107 CLSSRRNMCVHPRVMAHADGEAVDAQCRKMTASWVRARANTGE----HQDVELCSYYENYESRKSDENVLPPGIYSVDDLKELGIGKGWCPYFLTRYVVTYADVIVYNYQYMLDPKVSAMVSRAFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISAQVNKMKQADKARLDAEYRRLVEGL------RSSSAVVAPT------------------------YVNPANQQAIDTSNDILTANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAIAMETKPMKFCYTRLNSLMRTLEITNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDGV-SGAHDPVLQLACLDASLAMRPVFERFSSV 470          
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Match: K3WFP6_GLOUD (General transcription and DNA repair factor IIH helicase subunit XPD n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP6_GLOUD)

HSP 1 Score: 419 bits (1077), Expect = 5.840e-137
Identity = 220/397 (55.42%), Postives = 280/397 (70.53%), Query Frame = 0
Query:    1 CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGGGELCEFFEGYSANGSD-AAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINHANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDLDKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRASGGVAGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXATEVAVAADAIPANPALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFIHRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVGTYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV 396
            CLSSRRN+C+H RV+  +D EAVDG CR MTASWVR KA         G  E+C F+E Y +  SD   +P GIY++DDLKE G +KGWCPYFL R++++ A+V+VYNYQYMLDPKV+ MVSR  E ES+VVFDEAHNIDNVC EALSV+LD+RSLD ASR L  ISS+V  MK+ D+ARL+AEY+RLV GL      R+S  V                                   +  + D + ANP LP D+L EA+PGNIRRAEHF++FMR+++E+ +TR+RV++VESETP AF+H + Q  ++E KP+KF Y+RLNSL+RTLEVT L++F  L  VADFAT+V TY +GF ++IEP      GV++PV++LACLDASLAIRPVFERF+SV
Sbjct:  107 CLSSRRNMCVHPRVMAHADGEAVDGQCRKMTASWVRTKAVTH-----PGEVEVCSFYENYESRKSDETVLPAGIYNVDDLKELGVQKGWCPYFLTRYVVSFADVIVYNYQYMLDPKVSAMVSRSFEKESIVVFDEAHNIDNVCIEALSVELDRRSLDRASRNLTTISSQVNRMKQADKARLDAEYRRLVEGL------RSSDAVVAPT----------------------YTNPNTQQHIDTSNDILMANPVLPDDVLDEAIPGNIRRAEHFIAFMRRLIEYLRTRIRVRNVESETPQAFLHHLNQAISMETKPMKFCYTRLNSLMRTLEVTNLEEFNSLAAVADFATLVATYADGFMLIIEPYDGQ-SGVHDPVLQLACLDASLAIRPVFERFSSV 469          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14603.3534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN2_ECTSI2.560e-24097.22General transcription and DNA repair factor IIH he... [more]
A0A836CJZ4_9STRA3.000e-17763.79General transcription and DNA repair factor IIH he... [more]
K8YZX4_NANGC2.690e-16063.66General transcription and DNA repair factor IIH he... [more]
A0A7S2GG08_9STRA6.510e-15560.50DNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A7R9U4D1_9STRA4.970e-15359.85General transcription and DNA repair factor IIH he... [more]
A0A7S2D9H7_9STRA6.630e-15160.50General transcription and DNA repair factor IIH he... [more]
A0A2P4X6T2_9STRA8.450e-13955.16General transcription and DNA repair factor IIH he... [more]
A0A7S2P3V6_9STRA4.490e-13855.28General transcription and DNA repair factor IIH he... [more]
A0A8K1FGF4_PYTOL2.430e-13755.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WFP6_GLOUD5.840e-13755.42General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488deadxpdcoord: 1..179
e-value: 2.2E-14
score: 63.8
IPR010643Helical and beta-bridge domainPFAMPF06777HBBcoord: 242..355
e-value: 1.5E-22
score: 80.2
IPR010614DEAD2PFAMPF06733DEAD_2coord: 1..155
e-value: 6.6E-41
score: 139.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..188
e-value: 1.5E-30
score: 108.2
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..396
IPR001945RAD3/XPD familyPANTHERPTHR11472:SF1GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPDcoord: 1..396
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 128..137
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 1..189
score: 20.275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14603contigEcto-sp13_S_contig14603:1..4336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14603.3534.1mRNA_Ecto-sp13_S_contig14603.3534.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14603 1..4336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14603.3534.1 ID=prot_Ecto-sp13_S_contig14603.3534.1|Name=mRNA_Ecto-sp13_S_contig14603.3534.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp
CLSSRRNLCIHERVIEESDREAVDGACRDMTASWVRKKAEAGRGGGGEGG
GELCEFFEGYSANGSDAAMPNGIYSLDDLKEFGKEKGWCPYFLARHIINH
ANVLVYNYQYMLDPKVAGMVSRELEAESVVVFDEAHNIDNVCTEALSVDL
DKRSLDAASRCLGKISSKVAEMKRTDQARLNAEYQRLVSGLADSGLGRAS
GGVAGSAAGAGAAAAAGGGGGGAAGAGASSTAGGGATEVAVAADAIPANP
ALPADILQEAVPGNIRRAEHFVSFMRKVVEHFKTRVRVQSVESETPLAFI
HRMQQVTALERKPLKFAYSRLNSLLRTLEVTGLDDFRPLVDVADFATMVG
TYTEGFAVVIEPTGSVVPGVYEPVMRLACLDASLAIRPVFERFASV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006554Helicase-like_DEXD_c2
IPR010643HBB
IPR010614DEAD_2
IPR001945RAD3/XPD
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3