mRNA_Ecto-sp13_S_contig14599.3527.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 268 bits (684), Expect = 5.280e-80 Identity = 168/182 (92.31%), Postives = 170/182 (93.41%), Query Frame = 1
Query: 1 SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKKLKRLALETGFEAATSAGS 546
S GASRGFDALIIAISQ YEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSP AM TR HTRSS TR XXXXXXXXXXXXXXXXXXXXXXXXKA ISSRVPVGQALGLTWALPTEILLQ VAVELW KLEFL+LRESLSPSDLVSVAWP+ LKRLALETGFEAA SAGS
Sbjct: 3 SEGASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAISAGS 184
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 128 bits (321), Expect = 2.390e-31 Identity = 76/174 (43.68%), Postives = 95/174 (54.60%), Query Frame = 1
Query: 1 SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKKLKRLALETGF 522
+ G +R FDA IA+SQ EG KRWYTST EL+L SL+ CRACR PT+HVRV TP SLWSP ++ +T+SS R + SRVPV +AL LTWA E L+Q A+ELW + E L + L + L SV WP L +L L+T F
Sbjct: 3 TEGYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVR----------------------------VVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDF 148
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 123 bits (309), Expect = 4.460e-27 Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 1
Query: 1 SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKKLKRLALE 513
S R DA ++A+SQ YEG KRWYTSTL+L+LASLE C ACR P +HV VDA TPP+LWS A S+RVP QA+GLTWA PTE L + ELW +LE L+L+ SL ++L SV WP+ L+RL ++
Sbjct: 3 SEAQRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS-----------------------------------LGQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMD 138
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 125 bits (313), Expect = 9.030e-27 Identity = 74/180 (41.11%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 1 SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKKLKRLALETGFEAATSA 540
+ G S+ DA ++A++Q +G+ KRWY STLEL+L SLE C ACRRV T+HVRV TPPSLW P T + RS K CISSRVPV QA GLTWALP +L Q A E+ R S + L S WP++LKR+ E+ T++
Sbjct: 3 TKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSP----------------------------KVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTAS 154
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 119 bits (299), Expect = 5.270e-26 Identity = 75/179 (41.90%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 7 GASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKK-LKRLALETGFEAATSA 540
G S A I+A++Q G+ KRWY STLEL+L SLE C ACRRVPT+HVRVD TP SLWSP RS +AC+S+RVP QA GLTWAL E+LLQ AVEL + ++ R+ + S + L S+ W + LKRL ++ A+T++
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSR----------------------------EACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTAS 163
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 119 bits (299), Expect = 4.060e-25 Identity = 79/174 (45.40%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 13 SRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVS-VAWPKKLKRLALETGFEAA 531
+R DA +IA+SQ EG KRWY STLEL+L SL+ CRACR +HV VD TP SLWS R +TR +TRS N ISSRVPV +AL LTWAL E LL+ A+ELW E L L S S L S V WP+ L +L L T + A
Sbjct: 9 TRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLH----------------------------ISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIA 154
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 6.960e-20 Identity = 67/169 (39.64%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 1 SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLS-PSDLVSVAWPKKLKRL 504
+ G D LI+A++Q +G+ KRWY STLEL+L SLE C ACR +HV V +TPP+LWS R RT RS + C S+RVP QAL TWALP + L Q A E E RL++ S + + SV WP+ LKRL
Sbjct: 83 TEGGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSP----------------------------EVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTER-RLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.530e-17 Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 13 SRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRS 228
S+ DA ++A++Q +G+ KRWY STLEL+L SLE C ACR VPT+HVRVD TP SLWSPR H RS
Sbjct: 39 SKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRS 110
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 4.290e-17 Identity = 68/169 (40.24%), Postives = 80/169 (47.34%), Query Frame = 1
Query: 7 GASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVS---VAWPKKLKRL 504
G S DA I+A+ Q +GR KRWY STLEL+L SLE C ACR + V++ TP SLWSPR + RS +ACI SRVP QA G WALP EILL A EL E R+ PS S + W +KL RL
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSR----------------------------EACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSEN---RQPTGPSSATSPGRMGWFQKLTRL 162
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 1.120e-13 Identity = 56/144 (38.89%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 73 RWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPRAMRTRVHTRSSNTRXXXXXXXXXXXXXXXXXXXXXXXXXKACISSRVPVGQALGLTWALPTEILLQDVAVELWIKLEFLRLRESLSPSDLVSVAWPKKLKRL 504
RW+TSTL ++LASLE CRA R +PTI + VD+ P SLW R +T TR R KA SRVP+ +A L W L E LLQ AVELW L+ L L +S + S+ P++L++L
Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCW-----------------------KARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQL 124 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14599.3527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14599.3527.1 >prot_Ecto-sp13_S_contig14599.3527.1 ID=prot_Ecto-sp13_S_contig14599.3527.1|Name=mRNA_Ecto-sp13_S_contig14599.3527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=501bp SSGASRGFDALIIAISQVYEGRGKRWYTSTLELRLASLETCRACRRVPTIback to top mRNA from alignment at Ecto-sp13_S_contig14599:557..2059- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14599.3527.1 ID=mRNA_Ecto-sp13_S_contig14599.3527.1|Name=mRNA_Ecto-sp13_S_contig14599.3527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14599:557..2059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14599:557..2059- >mRNA_Ecto-sp13_S_contig14599.3527.1 ID=mRNA_Ecto-sp13_S_contig14599.3527.1|Name=mRNA_Ecto-sp13_S_contig14599.3527.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14599:557..2059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |