mRNA_Ecto-sp13_S_contig14593.3524.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: D7FYD1_ECTSI (GLOBIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD1_ECTSI) HSP 1 Score: 170 bits (431), Expect = 3.720e-52 Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREERGEP 309
K LFK V+ME+QGAKLMKV+GVAVMML+ +D FKPMLVK G+KHV YGV DDMYPS+VSALLITLEKGLGEECHQ TKDAW WVMN+IAAVCIAAARE+ G P
Sbjct: 46 KPLFKDVDMEKQGAKLMKVIGVAVMMLDKMDQFKPMLVKLGKKHVTYGVTDDMYPSVVSALLITLEKGLGEECHQLTKDAWAWVMNSIAAVCIAAAREDTGAP 148
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: D7G782_ECTSI (Globin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G782_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.010e-33 Identity = 62/102 (60.78%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREERGE 306
K LFK +M++QG KLMK LGVAV MLN +D KP+L GRKHV YGV +MYPS+ ALLIT EKGLGEEC T AWTWV I+++CIAAA E + E
Sbjct: 54 KPLFKDTDMDKQGEKLMKTLGVAVAMLNKMDTLKPILENLGRKHVDYGVTPEMYPSVGKALLITFEKGLGEECTPLTTKAWTWVFGIISSICIAAASEVKPE 155
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A6H5K069_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K069_9PHAE) HSP 1 Score: 105 bits (262), Expect = 4.200e-25 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 64 VAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREERGEP 309
+A + + L+ + P + HV YGV D+MYPS+VSALLITLEKGLGEECHQ TKDAW WVMN+IAAVCIAAARE+ P
Sbjct: 230 IATSVYDQLEGY-PRKTLVAKVHVTYGVTDNMYPSVVSALLITLEKGLGEECHQLTKDAWAWVMNSIAAVCIAAAREDTRAP 310
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A2G2QV97_9GAMM (Hemin receptor n=3 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A2G2QV97_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 9.280e-20 Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREE 297
K LFKG NM EQG KLM+++G AV ML+ LD P++ G++H+AYGV D Y ++ SAL+ TL+ GLG+ ++ K+AW +A+ IAAA +E
Sbjct: 39 KPLFKG-NMREQGKKLMEMIGAAVRMLDRLDELVPVVEAMGKRHLAYGVEDAHYDTVGSALIETLQTGLGDGFTEDVKEAWIVAYGILASTMIAAAHKE 136
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A451AA85_9GAMM (Hemoglobin-like flavoprotein n=3 Tax=unclassified Candidatus Kentron TaxID=2643149 RepID=A0A451AA85_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 9.520e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 7 LFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREERG 303
LF G +M+EQGAKLMK++GVAV ++ +D + GR+HV YGV + Y ++ ALL TLEKGLG+E E KDAW + N +A++ AARE G
Sbjct: 43 LFTG-DMKEQGAKLMKMIGVAVNAVDEIDTIIEAVRSSGRRHVGYGVEEKHYETVGEALLWTLEKGLGDEFTPEVKDAWAVLYNEVASIMKDAAREVSG 140
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: UPI001E29A986 (globin domain-containing protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E29A986) HSP 1 Score: 86.3 bits (212), Expect = 1.680e-19 Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAA 285
K LF +M+EQGAKLMK++G+AV L+ LD P + ++HV YGV + Y + +ALL TLEKGLG+ +TK+AWT V +A IAA
Sbjct: 39 KPLFAKADMKEQGAKLMKMIGMAVASLDRLDEIMPAVTAMAQRHVEYGVKPEDYQPVGAALLWTLEKGLGDAFTPDTKEAWTTVYTTLAGAMIAA 133
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: UPI001444D429 (globin domain-containing protein n=1 Tax=Spongiibacter sp. KMU-166 TaxID=2721624 RepID=UPI001444D429) HSP 1 Score: 83.6 bits (205), Expect = 2.220e-18 Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAARE 294
K +FKG ++EEQG KLM +LG AV L+NL+ P++ K G +HV YGV Y ++ +ALL TL GLGE+ E K+AWT V +++ IAAA E
Sbjct: 39 KPMFKG-DIEEQGRKLMTMLGTAVRSLDNLEGLVPVVQKLGVRHVGYGVKTSHYATVGTALLDTLAAGLGEDFTPEVKEAWTVVYGVLSSTMIAAADE 135
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A7Y4U0B6_9DELT (Hemin receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U0B6_9DELT) HSP 1 Score: 82.8 bits (203), Expect = 4.030e-18 Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAA 288
K LF+G +MEEQG +LM+++G AV L+NL+ P+L G++HV YGV ++ Y ++ +ALL TL +GLGE + K+AWT V +A V + AA
Sbjct: 39 KSLFQG-DMEEQGKRLMEMIGTAVQKLDNLETVVPVLRSLGKRHVRYGVKEEHYQTVGTALLTTLAQGLGEHFTPQVKEAWTLVYGVMADVMMKAA 133
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A450YEK8_9GAMM (Hemoglobin-like flavoprotein n=1 Tax=Candidatus Kentron sp. SD TaxID=2126332 RepID=A0A450YEK8_9GAMM) HSP 1 Score: 82.8 bits (203), Expect = 4.240e-18 Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 7 LFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAVCIAAAREERG 303
LFK + +EQGAKLMK++ +AV L+ + PM+ GR+HV Y V ++ Y ++ +ALL TL+KGLG+ E KDAWT V IA++ AARE G
Sbjct: 42 LFK-TDTKEQGAKLMKMIAMAVNALDEFETAMPMIQSSGRRHVGYDVKEEDYETVGAALLWTLDKGLGDAFTPEVKDAWTAVYGEIASIMKQAAREISG 139
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Match: A0A553KX42_9ALTE (Hemin receptor n=1 Tax=Aliiglaciecola sp. M165 TaxID=2593649 RepID=A0A553KX42_9ALTE) HSP 1 Score: 82.0 bits (201), Expect = 8.270e-18 Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 1 KRLFKGVNMEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVSALLITLEKGLGEECHQETKDAWTWVMNAIAAV 273
K LFKG +M EQGAKLMK++G+AV LN+LD P++ G++HV YGV D+ Y ++ ALL TL +GLG+ QE + AWT +A+V
Sbjct: 39 KPLFKG-DMTEQGAKLMKMIGMAVNSLNDLDALVPVVQSLGKRHVDYGVEDEHYDTVGEALLWTLGQGLGDAFDQEVEAAWTKTYVTLASV 128 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14593.3524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14593.3524.1 >prot_Ecto-sp13_S_contig14593.3524.1 ID=prot_Ecto-sp13_S_contig14593.3524.1|Name=mRNA_Ecto-sp13_S_contig14593.3524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp MEEQGAKLMKVLGVAVMMLNNLDHFKPMLVKPGRKHVAYGVMDDMYPSLVback to top mRNA from alignment at Ecto-sp13_S_contig14593:416..1183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14593.3524.1 ID=mRNA_Ecto-sp13_S_contig14593.3524.1|Name=mRNA_Ecto-sp13_S_contig14593.3524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14593:416..1183- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14593:416..1183- >mRNA_Ecto-sp13_S_contig14593.3524.1 ID=mRNA_Ecto-sp13_S_contig14593.3524.1|Name=mRNA_Ecto-sp13_S_contig14593.3524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14593:416..1183- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |