mRNA_Ecto-sp13_S_contig14551.3497.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: D8LKP0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP0_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 7.160e-188 Identity = 317/337 (94.07%), Postives = 321/337 (95.25%), Query Frame = 1
Query: 1 SSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGASIGTGGIAGAIGGTPAAGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXXXXXXXXPAWTGLPHPPQWLNTEEYPQGVPPSHKTNSSSRGVETLGVTGAGSPKGTGSARQAAGVDAGAYSGGEGKKRPRADGAAQAAKTEETKARARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 1011
SSSLATVGRIPSDPVLAMQMGA+MALSGNLGLIPFGAS+GTGGIAGAI GTP AGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXX PAWTGLPHPPQWL EE+PQGVPPSHKTNSSSRGVET GVTGAGSPKG GSARQA GVDAGAYSGGEGKKRPRADGAAQ AKTEET+ARARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQL RQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG
Sbjct: 170 SSSLATVGRIPSDPVLAMQMGAQMALSGNLGLIPFGASMGTGGIAGAISGTPTAGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXVPPLGGLPAWTGLPHPPQWLKKEEHPQGVPPSHKTNSSSRGVETPGVTGAGSPKGAGSARQAVGVDAGAYSGGEGKKRPRADGAAQTAKTEETRARARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 506
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A6H5J8M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M8_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 3.590e-187 Identity = 322/337 (95.55%), Postives = 327/337 (97.03%), Query Frame = 1
Query: 1 SSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGASIGTGGIAGAIGGTPAAGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXXXXXXXXPAWTGLPHPPQWLNTEEYPQGVPPSHKTNSSSRGVETLGVTGAGSPKGTGSARQAAGVDAGAYSGGEGKKRPRADGAAQAAKTEETKARARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 1011
SSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGAS+G+GGIAGAIGGTPAAGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXXXXX PAWTGLPHPPQWL TE++PQGVPPSHK NSSSRGVET GVTGAGSPKG GSA QAAGVDAGAYSGGEGKKRPRADGAAQAAKTEETKARARDTSKDGRKRKKM+LGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSD NQASLAEALSRFKDLYADYGKQRKQEVEFHLRQL RQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG
Sbjct: 170 SSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGASMGSGGIAGAIGGTPAAGAKPTAASTQAQHPLIAPPAALXXXXXXXXXXXXXXXXXXXXXXDGLPAWTGLPHPPQWLETEKHPQGVPPSHKANSSSRGVETPGVTGAGSPKGNGSAWQAAGVDAGAYSGGEGKKRPRADGAAQAAKTEETKARARDTSKDGRKRKKMTLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDLNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLERQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 506
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A7S1U3Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3Q8_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.850e-26 Identity = 65/139 (46.76%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 595 RKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 1011
RK+K+ + EL+ER++ + +N +L HL+NV ++ L+ ++KK MEA I LEA +S +D A LA + FK+ YADYG QR++E FH+ QL R ++PT TTKMSLWT+EQ SF+ D + SL IL+ ELG
Sbjct: 9 RKKKRPKIEELQERLEVLRSENSELTHHLTNVEERHKLLNAEKKAMEALIRRTLEATQSGAADP--AQLARCIGDFKNRYADYGPQRQRECNFHMDQLERLLIPTQTTKMSLWTMEQPPSFFDDPNKNSLGAILKRELG 145
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A7S4DKP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKP9_HETAK) HSP 1 Score: 109 bits (273), Expect = 2.480e-23 Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 1
Query: 598 KRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRK-RGSLSLILRAELG 1011
KRK+ + ELEER++ + E++ QLK HL N DK +A +K ME ++ A+L+ + L ++KDLY+DYG+QRK+EV+FHL QL + PT TTKMSLWTLEQDE+F+ D SL IL E+G
Sbjct: 185 KRKRETAEELEERLRVLKEEHNQLKSHLQNTEDKASQIAEQKFKMEKQLRAELQI--------GGTGIGPLLRQYKDLYSDYGEQRKKEVDFHLAQLQTLLTPTTTTKMSLWTLEQDEAFFADEADETSLMYILTQEMG 315
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A7S1GL93_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GL93_CYCTE) HSP 1 Score: 93.2 bits (230), Expect = 2.040e-17 Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 595 RKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 1011
R+RKK L + E ++ + +N LK HL+NV+++ +++ E E+ +R ++ L LS+F ++Y+DYG+ R +E+ FHL+QL R PT+ TKM LWTL Q E+F+ D KR ++ ILR ELG
Sbjct: 220 RRRKKPRLSDCESKLATLKAENELLKRHLANVSNRSEKFEEERRKQEHEM------RRLAEGGASSEQLRPLLSKFSEMYSDYGRHRDEELSFHLKQLERLAAPTNFTKMGLWTLGQSEAFFTDLKRNPIAGILRKELG 352
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: I2CPN1_NANGC (BZIP domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPN1_NANGC) HSP 1 Score: 88.6 bits (218), Expect = 1.510e-16 Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 781 DSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAELG 1011
D+++ +A L FK+ YADYG QR++EV FHL+QL ++PT TTKMSLWTLEQD++F++D + SLS IL LG
Sbjct: 78 DASEEEMAGYLEHFKECYADYGDQRRKEVNFHLQQLEALLLPTQTTKMSLWTLEQDDTFFRDTGKTSLSAILLETLG 154
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A7S4VTU8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTU8_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.370e-13 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 595 RKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRKRGSLSLILRAEL 1008
R+RKK L + E ++ + +N LK HL +K ++++ + + + +SN L + L +F ++Y+DYGK R++E++FHL QL R PT TKMSLWTL QD F++ +R ++ IL EL
Sbjct: 345 RRRKKPKLQDCETKLATLRAENATLKRHLEKFANKSQTFDLERQMAQQNMKNLV-----MRGESNSGVLKDVLDKFTEMYSDYGKNREEELDFHLSQLERLASPTTITKMSLWTLGQDHQFFRHPQRNPIAGILMKEL 477
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A5D6XWQ0_9STRA (BZIP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWQ0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.130e-13 Identity = 48/149 (32.21%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 568 RARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRK-RGSLSLILRAELG 1011
R R+++++ R+RK+ + +EER +Q+ +N +L+ L + + L +K + E+ ++ +++ LAE + FK+ Y+DYG R+ + +HL Q+ R ++PT TKM +W L QD+SF++D + SL +IL ELG
Sbjct: 311 RNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAMKLEEKEKNRVCEELEQMIQC------GASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELG 453
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A6A3LMW2_9STRA (BZIP domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LMW2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.310e-13 Identity = 48/149 (32.21%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 568 RARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRK-RGSLSLILRAELG 1011
R R+++++ R+RK+ + +EER +Q+ +N +L+ L + + +K + E+ ++ S +++ LAE + FK+ Y+DYG R+ + +HL Q+ R ++PT TKM +W L QD+SF++D + SL +IL ELG
Sbjct: 210 RNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQ------SGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELG 352
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Match: A0A484DS05_BRELC (BZIP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS05_BRELC) HSP 1 Score: 79.0 bits (193), Expect = 1.430e-12 Identity = 47/149 (31.54%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 568 RARDTSKDGRKRKKMSLGELEERVKQVSEDNGQLKLHLSNVNDKLMLMASKKKLMEAEIAAKLEAQRSHPSDSNQASLAEALSRFKDLYADYGKQRKQEVEFHLRQLARQIVPTDTTKMSLWTLEQDESFYKDRK-RGSLSLILRAELG 1011
R R+++++ R+RK+ + +EER +Q+ +N +L+ L + + +K + E+ + ++ +++ LAE + FK+ Y+DYG R+ + +HL Q+ R ++PT TKM +W L QD+SF++D + SL +IL ELG
Sbjct: 217 RNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELESMIQC------GASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPVILAKELG 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14551.3497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14551.3497.1 >prot_Ecto-sp13_S_contig14551.3497.1 ID=prot_Ecto-sp13_S_contig14551.3497.1|Name=mRNA_Ecto-sp13_S_contig14551.3497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=338bp SSSLATVGRIPSDPVLAMQMGARMALSGNLGLIPFGASIGTGGIAGAIGGback to top mRNA from alignment at Ecto-sp13_S_contig14551:2..4334+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14551.3497.1 ID=mRNA_Ecto-sp13_S_contig14551.3497.1|Name=mRNA_Ecto-sp13_S_contig14551.3497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14551:2..4334+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14551:2..4334+ >mRNA_Ecto-sp13_S_contig14551.3497.1 ID=mRNA_Ecto-sp13_S_contig14551.3497.1|Name=mRNA_Ecto-sp13_S_contig14551.3497.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1014bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14551:2..4334+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |