prot_Ecto-sp13_S_contig14512.3468.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14512.3468.1
Unique Name	prot_Ecto-sp13_S_contig14512.3468.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	176

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.420e-111
Identity = 168/176 (95.45%), Postives = 170/176 (96.59%), Query Frame = 0

Query:    1 MLAAIGTAAGLLATAGIIPASGFVAPSAAWNTARGSGYGTASRAATTMAADIFKAGPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            MLAA+GTAAGLLA AGI PA GFV PS AWNTARGSG+GTASRAATTMAADIFKAGPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISK EDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR
Sbjct:    1 MLAAVGTAAGLLAVAGITPAYGFVTPSTAWNTARGSGHGTASRAATTMAADIFKAGPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKKEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.050e-60
Identity = 91/121 (75.21%), Postives = 105/121 (86.78%), Query Frame = 0

Query:   56 GPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            G  E V+C V+GSGI+GSTLGFYLD+ GVDCVV EA + VGGNVISK  DGFLWEEGPN+FQPTPYIMRT VDLGLK+DLVLAD +L RFV+W+G L+PLP+SLQ I+ +FWLLSWPGKIR
Sbjct:    5 GKPESVECLVIGSGITGSTLGFYLDRLGVDCVVTEANEMVGGNVISKQRDGFLWEEGPNTFQPTPYIMRTAVDLGLKDDLVLADASLSRFVYWDGQLYPLPASLQDIVNNFWLLSWPGKIR 125

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S4DP84_9EUKA (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DP84_9EUKA)

HSP 1 Score: 165 bits (418), Expect = 2.110e-45
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 0

Query:   57 PVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVIS-KSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            PVE V+  VVGSG+SGS+L F+LD+ GVD V  EA  +VGGN+IS K+E+GFLWEEGPN+FQPTP I+R   DLG+ +DLVLADP+LPR VFW+  L+PLP S Q  + +F L+SWPGKIR
Sbjct:  118 PVEDVEAVVVGSGVSGSSLAFHLDQSGVDVVCAEANSRVGGNLISRKNEEGFLWEEGPNTFQPTPQILRFAHDLGIADDLVLADPSLPRLVFWDDKLWPLPGSPQDAVFNFGLMSWPGKIR 238

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S0XB76_9STRA (Protoporphyrinogen oxidase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB76_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.070e-44
Identity = 79/115 (68.70%), Postives = 89/115 (77.39%), Query Frame = 0

Query:   62 DCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            D  VVGSGISGST  FYLDK G   V+ EARD VGGN+ISK EDGFLWEEGPNSFQP P I+R   DLG+ ++LVLADPTLPRFV+WEG L+ LPS     +T F LL+WPGKIR
Sbjct:    2 DAVVVGSGISGSTAAFYLDKAGYKVVLAEARDVVGGNLISKKEDGFLWEEGPNSFQPNPAILRFAKDLGVIDELVLADPTLPRFVYWEGELYALPSKPTDAVT-FGLLTWPGKIR 115

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.290e-44
Identity = 80/118 (67.80%), Postives = 95/118 (80.51%), Query Frame = 0

Query:   59 EKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            E+VD  VVGSGISGS+LGFYL+K+GVD VV EARD+VGGNVISK++  FLWEEGPNSFQP  +IM+ T DLGL+ DLVLADPTL R+V W+G L+PLP +L      F LL+WP KIR
Sbjct:   51 EQVDALVVGSGISGSSLGFYLNKRGVDVVVTEARDEVGGNVISKTDGEFLWEEGPNSFQPALHIMQLTKDLGLENDLVLADPTLNRYVVWDGDLYPLPLALTDA-PFFKLLTWPAKIR 167

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S0VRP7_9CRYP (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VRP7_9CRYP)

HSP 1 Score: 162 bits (410), Expect = 5.320e-44
Identity = 87/141 (61.70%), Postives = 101/141 (71.63%), Query Frame = 0

Query:   41 ASRAATTMAADIFKAGPV-----EKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            A+R A  + A   +AGP      E+VD  V+GSG+SGS+LGF L +KGVD VV EARD VGGNVI++ EDGFLWEEGPN+FQPT  IMR  VDLGLK++L  AD TLPRFVFWE  LFPLP  L+     F LLS P KIR
Sbjct:   48 AARRARGVGAAGLRAGPAGGSGAEEVDTLVIGSGVSGSSLGFSLHQKGVDVVVTEARDVVGGNVITREEDGFLWEEGPNTFQPTRQIMRLAVDLGLKDELAFADHTLPRFVFWEDELFPLPGKLEDA-PFFRLLSIPEKIR 187

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S0U8V8_HEMAN (Protoporphyrinogen oxidase (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8V8_HEMAN)

HSP 1 Score: 161 bits (408), Expect = 1.030e-43
Identity = 81/118 (68.64%), Postives = 92/118 (77.97%), Query Frame = 0

Query:   59 EKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            E+VD  V+GSG+SGS+LGF L +KGVD +V EARD VGGNVI+K +DGFLWEEGPN+FQPT  IMR  VDLGLKED+V AD TLPRFVFWE  LFPLP  L+     F LLS P KIR
Sbjct:   74 EEVDTLVIGSGVSGSSLGFSLHQKGVDVLVTEARDVVGGNVITKEQDGFLWEEGPNTFQPTRQIMRLAVDLGLKEDVVFADHTLPRFVFWEDELFPLPGKLEDA-PFFRLLSIPEKIR 190

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S3ELQ9_9RHOD (Protoporphyrinogen oxidase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELQ9_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 2.870e-42
Identity = 78/135 (57.78%), Postives = 96/135 (71.11%), Query Frame = 0

Query:   42 SRAATTMAADIFKAGPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            S     ++A     G V+K D  VVGSG+SGS+L F L KKG++ ++ EARD++GGNVI+K E+G+ WEEGPN+FQP P+IMR  VDLGLK+D+VLAD TLPRFVFW G LF LP    S I  F LLS  G IR
Sbjct:   26 STGGVVVSATAADGGNVKKADTLVVGSGVSGSSLAFALHKKGLNVLMTEARDRIGGNVITKQENGYTWEEGPNTFQPAPHIMRMAVDLGLKDDVVLADHTLPRFVFWNGKLFALPLG-PSDIPKFRLLSPWGFIR 159

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S0ZBF2_9RHOD (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBF2_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 1.310e-41
Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = 0

Query:   51 DIFKAGPVEKV-DCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            D FKA   E+  D  VVG+GISGS+L F L + G D ++ EARD+VGGNVIS++E+G++WEEGPN+FQP P+I+R  VDLGLK+DLVLAD TLPRFV+W G LF LP   Q I   F LLS  G IR
Sbjct:   57 DGFKAQSSERTTDVLVVGAGISGSSLAFSLFQNGTDVLLAEARDRVGGNVISRNENGYVWEEGPNTFQPAPHILRLAVDLGLKDDLVLADHTLPRFVYWNGKLFALPLGPQDI-PKFRLLSPLGAIR 182

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BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Match: A0A7S0H584_9EUKA (Protoporphyrinogen oxidase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H584_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 2.940e-41
Identity = 72/121 (59.50%), Postives = 92/121 (76.03%), Query Frame = 0

Query:   57 PVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVISK-SEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEGGLFPLPSSLQSIITDFWLLSWPGKIR 176
            P+E+V+  VVGSG+SGS+L F+L + GV+ V  EA  +VGGN+ISK +E+GF WEEGPN+FQPTP IMR   DLG+  DLV A+PTLPR VFW+  L+PLP   Q  + +F L+SWPGKIR
Sbjct:   20 PMEEVEAVVVGSGVSGSSLAFHLKQSGVNVVCAEANSRVGGNLISKKNEEGFQWEEGPNTFQPTPQIMRFAHDLGIANDLVFANPTLPRLVFWDDKLWPLPMKPQDAVFNFGLISWPGKIR 140

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14512.3468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FU83_ECTSI	1.420e-111	95.45	Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxI...	[more]
A0A836C8C9_9STRA	4.050e-60	75.21	Protoporphyrinogen oxidase n=1 Tax=Tribonema minus...	[more]
A0A7S4DP84_9EUKA	2.110e-45	63.64	Protoporphyrinogen oxidase (Fragment) n=1 Tax=Loth...	[more]
A0A7S0XB76_9STRA	1.070e-44	68.70	Protoporphyrinogen oxidase n=1 Tax=Chromulina nebu...	[more]
A0A7S2Y0E6_9STRA	1.290e-44	67.80	Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japo...	[more]
A0A7S0VRP7_9CRYP	5.320e-44	61.70	Protoporphyrinogen oxidase (Fragment) n=1 Tax=Hemi...	[more]
A0A7S0U8V8_HEMAN	1.030e-43	68.64	Protoporphyrinogen oxidase (Fragment) n=2 Tax=Hemi...	[more]
A0A7S3ELQ9_9RHOD	2.870e-42	57.78	Protoporphyrinogen oxidase n=1 Tax=Rhodosorus mari...	[more]
A0A7S0ZBF2_9RHOD	1.310e-41	60.63	Protoporphyrinogen oxidase (Fragment) n=1 Tax=Tims...	[more]
A0A7S0H584_9EUKA	2.940e-41	59.50	Protoporphyrinogen oxidase n=1 Tax=Amorphochlora a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 61..176 e-value: 1.1E-22 score: 82.6
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 60..158
IPR004572	Protoporphyrinogen oxidase	TIGRFAM	TIGR00562	TIGR00562	coord: 60..176 e-value: 3.8E-29 score: 99.5
IPR002937	Amine oxidase	PFAM	PF01593	Amino_oxidase	coord: 78..174 e-value: 2.4E-15 score: 56.8
None	No IPR available	PANTHER	PTHR42923	FAMILY NOT NAMED	coord: 59..176
None	No IPR available	PANTHER	PTHR42923:SF3	PROTOPORPHYRINOGEN OXIDASE	coord: 59..176
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..176
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.493
None	No IPR available	TMHMM	TMhelix		coord: 4..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14512	contig	Ecto-sp13_S_contig14512:737..4228 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14512.3468.1	mRNA_Ecto-sp13_S_contig14512.3468.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14512 737..4228 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14512.3468.1 ID=prot_Ecto-sp13_S_contig14512.3468.1|Name=mRNA_Ecto-sp13_S_contig14512.3468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MLAAIGTAAGLLATAGIIPASGFVAPSAAWNTARGSGYGTASRAATTMAA
DIFKAGPVEKVDCAVVGSGISGSTLGFYLDKKGVDCVVLEARDQVGGNVI
SKSEDGFLWEEGPNSFQPTPYIMRTTVDLGLKEDLVLADPTLPRFVFWEG
GLFPLPSSLQSIITDFWLLSWPGKIR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf
IPR004572	Protoporphyrinogen_oxidase
IPR002937	Amino_oxidase