mRNA_Ecto-sp13_S_contig1450.3461.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 3465 bits (8984), Expect = 0.000e+0 Identity = 1835/2239 (81.96%), Postives = 1914/2239 (85.48%), Query Frame = 1
Query: 1 SRGRGRPRRPSTCSRPFFACEGRRDLQSVEIFALGSTGPGGRATPTSTAQRLTRENLRAQRMNRMALDREATTRARAEARAKAAGATRDAQLNKKRALAAARERLTPAAKADYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRVQGPPPFVPVVSTPPVLACDSPEGQIDGHDRPHMLDHIHHPSVLHKCLSDFTNHMVNSVRSVSCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPGDDA--KLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRDNDPAPDGGIGSRVDDHDPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLGRAMQTASGGPSLGQAAAAHAAVLAGRPSPVGTDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGAVEGTSTSPVDDTCQTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC-------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVMDSDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKTNGMLAQKLAAAEETSKRQAQNASFTASPDQQQDNRDRAEIHLSDYGDDEPGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASMADDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAKPFGNRIVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGTGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFLKDPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLQLLRDSMFDECALSPNIV 6474
SRGR RP RPST +R FFA +G D+Q++++ ALGS G G RATPTST QRLTR+NLRAQRMNRMAL+REA TRARA+ARA TRDA LNKKR AAR+RLTPAAKA Y XXXXXXXXXXXXXXXXXXXXXXXXXX R++GPPPFVPVV TPPVLACDSPEG++DGHDRPHMLD+IHHPSVLHKCLSDFTNH+VNSVRS SC ICDRNCKS+DCKLVAA+DLPHKDLL ADD LLAC AVR TFFNYPGDD+ KLL GLVLERLGFE SP+R+Q VCK+CLQSLLKKR+PEAALANGLWLG+FPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLD+DN LVG+H LAR+AQLAPENL GYSNDGSIPKAVLDAILP+KDSA AY+NARSTHAHGNR++DP PDGGI S D PTAPFVIETNAV+DTGDDLAVAGA KP+RLRDLGRAMQTASG PSL EAIENARWKLTG IS ADSRTL++VTP+DL AAAAMENG G SVLSDRA +AALIKTM SVHAGASWTPHNKR TRMIAISYIMQMGQPLIW+TINPAD+NSP+VVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVAT ADITRVMHG VEG ST PV DTCQTDPN+RHAKECLPTAPPT+CFPRDGEDRCP+HDQ YARLMY DL+ ITPGANLHKC ATCTKYNHLNSC SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIR+EAD DDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPV CPMSPLLTWA SRDGPLDGDTSRPDD DVIITPFKGKLT+A+RAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRV+RYDPLDNRQP+ AQSSDASDTDSD T+QPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAM+NIMRDIPRKDTQPVAHCRLLLCMY+PFFTLDDLKT GMLAQKLAAAEET+KR+AQNASFTASPD+QQDN D+AE+HL DYGDDEPGRSVIPTSARRLQT+FFV+DALRSFLAAGFSGDDSLP+ AFPLLSGRTRQQTMEDASHI LGTDVAA+TL VARQESSL+QKSTSCAASMADDAQPVSS SY TG DGGPP+QPYLIRLR AS EGLS QARGERDARR+ATNA VAQTDVGRTS LQHSVAVSIAQEFGLNR+QRLAFFIFANGLLAQ+RPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPA+AAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPD KAMHWKGVSVLAIEEVSMVGCNLL QLHKAACSMFP+HKAKPFGNR+VVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGT R+ADSLFDARVIAFRNKVNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPA LRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +STAGYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFLKDPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD AGTPAAGSFFA LQLLRDSMFDEC LSPNIV
Sbjct: 13 SRGR-RPVRPSTSNRSFFASDGPSDVQNLDLLALGSGGSGRRATPTSTGQRLTRDNLRAQRMNRMALEREAATRARAQARAXXXATTRDALLNKKRESVAARKRLTPAAKAAYQKRDRDAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRGPPPFVPVVKTPPVLACDSPEGRMDGHDRPHMLDNIHHPSVLHKCLSDFTNHIVNSVRSTSCGICDRNCKSMDCKLVAAKDLPHKDLLKADDKLLACSAVRGTFFNYPGDDSVPKLLDGLVLERLGFESTSPYRMQ------------VCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDPTPDGGIEST--DDGPTAPFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAMQTASGSPSLA--------------------------------------------------------------------------------------------------EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQTDPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAASTPAFQTAFDESIATLIGDDGLPDPLSDRFSADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDGPLDGDTSRPDDXXXXXXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQSSDASDTDSDCDTVQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMVNIMRDIPRKDTQPVAHCRLLLCMYIPFFTLDDLKTTGMLAQKLAAAEETAKREAQNASFTASPDKQQDNSDKAEVHLCDYGDDEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMADDAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGTSRKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 2241 bits (5807), Expect = 0.000e+0 Identity = 1298/2408 (53.90%), Postives = 1534/2408 (63.70%), Query Frame = 1
Query: 445 RRVQGPPPFVPVVSTPPVLACDSPEGQIDGHDRPHMLDHIHHPSVLHKCLSDFTNHMVNSVRSVSCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPG-DDAKLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRDND-PA-PDGGIGSRVDDHDPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLGRAMQTASGGPSLGQAAAAHAA--VLAGRPSPVGTDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGAVEGTSTSPVD--DTCQT--DPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSCS--------------------------------------------------------------------------ADIR------------------RLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVM--DSDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNR----QPNPAQSSDASDTDSDSYTMQPGD------PVSPSGRRASART---GRPRACRYDFVGEYKHKWQQ------------------------VLREKPAMINIMRDIPRKDTQPVAH---------------------------------------------CRLLLCMYVPFFTLDDLKT-----------------------------NGMLAQKLAAAEETSKRQAQNASFTASPDQQQDNRDRAEIHLSDYG-DDEPGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQ------------------------------------------KSTSCAASMA--DDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAKPFGNRIVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMG--TGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTS-TAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFLKDPGSFTPAYATLDDIGEAGPRPPKKQPRQP-GRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLQLLRDSMFDECALSPNIVVQAQQARQAILSNTSLPGAGSQMGDVASVFEAIAARCPQEGSPIWPDNFNDQQNRVVRTRREFGLDWRYANSCPVSNHSNLDITPDQTAALRNATVITIPNGTATTFHHNVQEFFSSGQASDLSIPGTSLCPFCA 6879
R +GP F P+V +PP+LACD +G+IDG+D+P MLD I HPS +HKC+ DF MVNS+ S SCA+CD + ID L+AA DL H DLL A D +L C VR FF YPG DD+K L GLVLERLGFE + P RL+ VC +C + L + RMPEAALANGLWLGEFPEHLRSA+FVE+IAASPVR+SG+VLALDELK G+++GSAKS MR TFTFYMQDAYGVQL+LPACD DIAGS T LVG AQLRRLLGARR M++DL F LD+DN LVG+H LARQAQ +PENLA +S +G +PKA+LD+I+ V+D +YANARSTHAH NR+ + PA D G DD PTAP V+E NAV+DTG+D AVA +SKP RLR LG +M SG PSL Q AAA AA V AGRPSP+GTD A+VLT SG++VSDF GLF+ A++DLFPHGVGG LD+R R LT K+WA+ILL+RRD RFRK RTFLFCVCALIFRREAIENAR+KL G+IS + LA VTP DL+ AAA ME G S L++ R +LI+ M SV +GASWT HNKR TRMIAISY++QMGQPLIW+TI+PAD NSP+V+K+ GVDIDV+SKLK++FPDY +KLRLVA+DPVASA F+HNTI GVL+CLLRFGASDGDGG+LGRVKGYVGMTEEQKRL+LH HLLVW++GYNDF SFR LMD+TP RYTELA+YLDNI+FNQ+AT ADI RVM G V D+ Q DP R AKEC+P P FP GE AYARLMY DL+ +TPGANLHKCQATC KYNH +S AD+R RLH+HINSFNPVI FA+RSNMD+KVLL+ SDAKG+L+YILNY+TKTEQTLDVLLPLL+PVVERIR ++ A +KE+AVRLVRSCLCKQLSSL IGGPAAASKVL + D K+SH PV CPM+PLLTWAS RD P D D S DD DS VIITPF+GKLT+A+R +LLYR+RC PDDT H LH SY W + VR+ + L R QP+ A+ +D D D D PGD PVSPSGR AS R GRPRA RY+ VGEY++KW+Q ++REKPA+ NI++D+P DTQPVAH RLL+CM+VPFFTLDDLK GMLAQKLAAAEET+KR+A+ + PD DN ++ L YG +DEPG SVIP + RR+ TD FV DA R+F+AAGF+GD S PD + PLLSGR+ + D S + GTD+ AAT ++RQE+ LE KS+S A+++A D + S G PI+PY+I LR+AS +GLS +A RD RR TNA VA TD+G + LQH A SIAQEFGLNRKQR AF+IFANGLLAQ RP+PP ALR+YIGGGAGTGK+HVL+AI+AF++ P V +PR RLL VA+QGKQAA+VGGTTVHSVC G LSG H+ QS+LP +KA HWKG VLAIEE+SM+ CNLL +LH ACSMFPLHK +PFGNR+VVMLGDF+QL P+KA+SLA G + RR MTVTERYG+DLFR ANACVML ESNRF+P YAP+MERCL S+C DDV L+N VMG T R A S FDA ++ FRNKV+T+LT PMMR C+A GT LF+A AHDVYV HQRPG E P T+APWP LR EI SLDD KT DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDPRED+ T GYSVV LRYAPLRVFVYIK+ADDAGLHL+GL RGV+A+APVE++FTI GI KRKF FKRRQ+P DI+ ++ YLHRL T++LF +D +FTPA A+LD + GP ++Q R+ GRHGPGA RRVAHLI N NNCFFNSALAL LAAWDGQ LP ++AGTPAAGSFF+ LQLLRD MF+ L +IV S F AR ++TPDQ+A LR ATVITIPNG + TF NV FF + +DL+IPG SL P CA
Sbjct: 126 RAERGPRDFTPIVKSPPILACDDEQGRIDGNDQPFMLDDILHPSRVHKCIHDFCTFMVNSIESTSCAVCDVLHREIDINLIAATDLRHADLLKASDKMLGCAGVRDRFFGYPGGDDSKCLDGLVLERLGFEADPPHRLR------------VCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTDRAGGILRDDTLPTAPMVVEINAVMDTGEDRAVAESSKPARLRGLGSSM--CSGDPSLAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSLNEGIR--SLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQGEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAAFQEAFDNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKRDKPADADNSPGDDXXXXXXXXXXXDDSGVIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPS-ARGNDDDDVD-DVDDGHPGDECLDDDPVSPSGRTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNV-AGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDACRDISFVCGGTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHESNRFSPSYAPVMERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLP-------------------------------------------------------------------DILGIINYLHRLGKETLKLFPQDASTFTPASASLDAATDEGPTSSRRQRRRTTGRHGPGAARRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIV--------------------------ESSFNCFRAR---------------------------------------------EVTPDQSARLRGATVITIPNGVSATFQDNVFNFFRTSAPTDLAIPGQSLYPCCA 2375
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 1692 bits (4381), Expect = 0.000e+0 Identity = 947/1599 (59.22%), Postives = 1107/1599 (69.23%), Query Frame = 1
Query: 448 RVQGPPPFVPVVSTPPVLACDSPEGQIDGHDRPHMLDHIHHPSVLHKCLSDFTNHMVNSVRSVSCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPGDDAKLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRDNDPAPDGGIGSRVDDH-----DPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLG-----------RAMQTASGGPSLGQAAAAHAAVLAGRPSPVGTDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGA-----VEGTSTSPVDDTCQTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC-------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDS---ETEDVMDSDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVS----------------PSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKTNG-----------------------------MLAQKLAAAEETSKRQAQNASFTASPDQQQDNRDRAEIHLSDYGD-DEPGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASMADDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASV 4797
R P F PVV P+LA + +G+IDGHD PH+LD IHHPSV+HKCL+DF MVNS+R SCA+CDR C+ + CKLVA +DLPHK LL A+++LL C AVR FFNYPGD +L G VL R GF+ ++P L+ VC++CL SLLK +MPEAALANGLWLG+FP+HLR ATFVEM+AASPVRISGMVLALDELK G+V GSAKS MRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVG KP++ QLR+L GARR+MV+DLL FQLD+DN LVG H LA++AQL+ ENL Y +DGSIPKA+ DA+LPV DS NAYANARSTHAHGNR+ D DG DH T PF+IETNA++ +GDDLAV+ +KP RLR LG A ASG SL Q AAA A AG+P P GT NALVLT SG+MVSDF N GLFVGAYFDLFPHGVGGHLD+R RPL LK+WAQILLRRRDARFRKSRTFL+CVCALIFRREAI NARWKL G + + +A VT DL A AA ME G S L+DR + LIK M SVHAGASWT +NKR TRMIAIS+IMQMGQPL W+TINPAD+NSP+V+ + GV++DV+S+LKA+FP Y DKLR VANDPVASADFFH TID VL+CLLRFGA DGDGG+LGRVKGYVGMTEEQKRL LHCHLLVWV+GYNDFASFR+LMD+TP RY ELA+YLD +IFNQ+AT +DI VM G VE + +P D R AKE + PP+ CFPRDG+ R +HD YA LMY DL+ +T GANLHKCQATC K+NH +SC +A++RRLHSHINSFNPVIQFAIRSNMDLK+LLRDSDAKG+LFYILNYSTKTEQTLDVLLPLL PV ERIR ++DGA +KELAVRLVRSCLCKQLSSL+IGGPAAASKV D+PDH+ISH V C MSPLLTWA+SRDGPLDG+ R DD SD DV +S +IITPFKGKLT+A+R YLLY RC P+DT + +HGMSYV WHKLVR+ R P N +PA + D SD DS+S GD P+ RR + GRPRA R FVG++K+KW QV+REK AM+NIMRDIPR DTQPVAH RLLLCM+VPFF LDDLK NG MLAQ+LAA EET+KR+A+ A+ D+ + D E+ + DYG D SV+P S +RL+TD FV DALRSF A G D A+ATL++ARQES+LEQK + S+ D S+ S T + P + PYL++LR+A+H GLS +AR +R+A+R TNA VA TDVG +T QH VAVSIAQEFGLNRKQRLAF+IFANGLLAQNRP+PPEALR+YIGGGAGTGKSHVLKA+KAFI+CP +A ++P GRLLTVA+QGK A++V
Sbjct: 47 RAARPLAFAPVVKQRPILAFNHSQGRIDGHDTPHLLDDIHHPSVMHKCLADFDTFMVNSIRRTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLR------------VCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQP-PDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDAPAPPPDQLM-----RPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPLDGEVDRVDDSSDXXXXNDSDVEES-IIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLERCLPGRN---HPAPT-DRSDDDSESS----GDDXPXXXXXIGXXXXXXXDVPATRRPAR--GRPRANRLRFVGDFKNKWHQVMREKTAMVNIMRDIPRADTQPVAHARLLLCMFVPFFNLDDLKLNGESWTQAMARIDASNSWDPFSKPLRLNIKGMLAQRLAADEETAKRKAEQAALAEPRDRTGTDTD-GELLVDDYGSLDVDETSVMPVSIQRLKTDLFVKDALRSFGA----------------------------------GPDAASATLAMARQESALEQKMGHLS-SLVDSVVEPSTASTATSTNAVP-LAPYLMKLRDAAHAGLSVEARIQRNAKRDGTNAAVANTDVGAIATSQHPVAVSIAQEFGLNRKQRLAFYIFANGLLAQNRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPTLAGQIPPGRLLTVAFQGKMASAV 1579
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 1527 bits (3953), Expect = 0.000e+0 Identity = 950/2149 (44.21%), Postives = 1223/2149 (56.91%), Query Frame = 1
Query: 445 RRVQGPPPFVPVVSTPPVLACDSPEGQIDGHDRP-HMLDHIHHPSVLHKCLSDFTNHMVNSVRSVSCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPGDDAKLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRD-NDPAPD----------GGIGSRVDDHDPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLGRAMQTASG--------GPSLGQAAAAHAAVLAGRPSPVGTDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHG--------AVEGTSTSPVDDTCQTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC--------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVMDSDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKTNG----MLAQKLAAAEETSKRQAQNASFTASPDQQQDNRDRAE--IHLSDYGDDE-PGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASMADDAQPVSSLSYLTGADGGPP--IQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRD-GGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAKPFGNRI------VVMLGDFHQLSPVKAKSLAC-GAGVSTRRRDMTVTERYGADLFRSANACVMLDE-SNRFTPIYAPIMERCLRSECISDDVDLINNHVMG--TGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGIN-KRKFTFKRRQIPLTAGCLSSV-------------YRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFLKDPGSFTPAYATLDDIGEAGPRPPKKQP------RQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLQLLRDSMFD 6447
R +GP PFVP++ PV ACD EG +DG DRP +++D + HP C H+V+S SVS A+ D C DC V AE+L +KDLLT + L C + +F NYPGD AK+L GLVL FE P RL+ VC CL+ + K +M G LG+FPE RSA +VEMIAA+PVR+SG +AL+E K +SGSAKS MRGTFTFYMQ+ Y V LPAC TD+AG+FTCAL G K QLR L GARR M AQ + EN Y+ DG IPK + DA++PV + N ANARSTHA GNR+ +P D G S D+ P A F+IETN V+ TG+D+A + + RLR L M+ ++ G S+ + A A +A A R P NA+V+T +G MVSDF + GLFV AYF+LF HG+GGHLD R RP++ K+WAQI LRRRD RF K +TF FCVCAL FRREA NARWK+ G + + + TLAS++P+D+ AAA +E G G+ S+IMQMGQPL W+T +PAD NSP+V+++ GV IDV+S+LK++FPDYV++LRLVA D V SA F+H+ VL+C LRFGA+DGDGG+LGRVK VGMTEEQ+RL+LHCHLLVWV+GYNDF+ FR+LMD++P +Y +LA++L+ +IFNQVAT D G A E T TS DP + AKE + PPT CFPRDG DRC +HD+A++RL+Y DL+EITP +LHKCQ C K+NH +SC +A +RRL +HIN +NP IQF IRSNMDLKVLL D DAKGI+FYILNY+TKT NE+ G KE+ VRLVRSCLCKQL+SL+ GGPAAASKV D+ D KIS + CPM L+ F GKLT +R++L YRNRC DT H LH +SYV WH+ VRV RY P + + SDTD+DS +P + R GR + YD VG+Y+ KW QV+R K M+NIMRDIPR DTQ HCRLLLCM++PFF L +LK + Q++ ++ K++A + D AE I L +YGDD+ SVIP +A L+T V D +LP ++ SGR+ + D + I + + T +A+QE LE + S AS+A+ T + P + PYL+ LR AS EFGLNRKQRLAFF+F+NG+LA+ ++LR+YIGGGA +GKSHVLKA+KAFIECPA+ ++ R+L VA++G+QAA+VGGTT+HSVC G + G+LS +HDDQS + DT+A+HWKGV++LA+EEVSMVGC LL L+KAACSMFP+HK KPFGN +V+ G F+QLS + C + + ++M+ +YGADLFR NACV+LD+ SNRF+P YAP+M+R L S +D+ L + V+ G A +D RV NTVLTVPMMRTWCKAN T LFIAPA D +VG +RPG LR EI SLDD KTNDLPT ACLAIGAPVVLHK PQFV+LGVCNNSDGIIRGIE+ RE+ VFVYI++A DAGL L L RGV +V PVER F+IV KRKFTF R+Q+PLTAGCLS++ S ++R+IILD+++PP +D A+ Y+ALSRAT L+DL LLFPVTL+DL++P+N D++A++++LHRL++ T L D +FT A+L G+A +PGRH P +T +A LI N+ NN F NSA+AL LAA+DG PD TPA +FF ++L++D+MF+
Sbjct: 115 RVARGPVPFVPIIKERPVSACDHREGLLDGIDRPLYLVDGVLHPPY---CTKVLVAHIVDSSLSVSRAVYDLFCTKTDCVWVKAEELQNKDLLTPNKILTECAMFKPSFINYPGDKAKVLDGLVLALEDFEAGEPHRLR------------VCSTCLKDMRKNKMGRQRKYYGFMLGDFPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSM------------------------AQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGGDSSTSAKYGNNGNTDSSTDEGAP-ASFIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKSAPSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGTSEAGP----DPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQAAFDASISELDDGDNCNSNPKADRFTAVLRRLGAHINPYNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTA------------------NESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLIA------------------------------------FGGKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYTP------GASNCVNRSDTDNDSSDDDMDEP-----QHTPQRRGRASSDPYDCVGKYRKKWIQVVRRKAVMVNIMRDIPRADTQQEDHCRLLLCMFLPFFDLSNLKNSDESWESAMQRVEDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYGDDDNDSASVIPETAIGLRTKIVV--------------DTALPVRSWHPRSGRSTEDVETDLTKITSWSGSSDPTY-MAQQEKCLEAMTESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLS-----NFTCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNRFSPTYAPLMDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRV-------NTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE-------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSDYIASSCLYHPILSHCVSLRRIILDLQKPPQPLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFN 2014
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 1299 bits (3361), Expect = 0.000e+0 Identity = 714/1167 (61.18%), Postives = 821/1167 (70.35%), Query Frame = 1
Query: 637 SCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPGDDAKLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRDNDPAPDGGIGSRVDDH-----DPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLG-----------RAMQTASGGPSLGQAAAAHAAVLAGRPSPVGTDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGA-----VEGTSTSPVDDTCQTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC-------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDS---ETEDVMDSDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVS----------------PSGRRASARTGRPRACRYDFVGEYKHKWQQVLR 3780
SCA+CDR C+ + CKLVA +DLPHK LL A+++LL C AVR FFNYPGD +L G VL R GF+ ++P L+ VC++CL SLLK +MPEAALANGLWLG+FP+HLR ATFVEM+AASPVRISGMVLALDELK G+V GSAKS MRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVG KP++ QLR+L GARR+MV+DLL FQLD+DN LVG H LA++AQL+ ENL Y +DGSIPKA+ DA+LPV DS NAYANARSTHAHGNR+ D DG DH T PF+IETNA++ +GDDLAV+ +KP RLR LG A ASG SL Q AAA A AG+P P GT NALVLT SG+MVSDF N GLFVGAYFDLFPHGVGGHLD+R RPL LK+WAQILLRRRDARFRKSRTFL+CVCALIFRREAI NARWKL G + + +A VT DL A AA ME G S L+DR + LIK M VHAGASWT +NKR TRMIAIS+IMQMGQPL W+TINPAD+NSP+V+ + GV++DV+S+LKA+FP Y DKLR VANDPVASADFFH TID VL+CLLRFGA DGDGG+LGRVKGYVGMTEEQKRL LHCHLLVWV+GYNDFASFR+LMD+TP RY ELA+YLD +IFNQ+AT +DI VM G VE +P D R AKE + PP+ CFPRDG+ R +HD YA LMY DL+ +T GANLHKCQATC K+NH +SC +A++RRLHSHINSFNPVIQFAIRSNMDLK+LLRDSDAKG+LFYILNYSTKTEQ LDVLLPLL PV ERIR ++DGA +KELAVRLVRSCLCKQLSSL+IGGPAAASKV D+PDH+ISH V C MSPLLTWA+SRDGPLDG+ R DD SD DV +S +IITPFKGKLT+A+R YLLY RC P+DT + +HGMSYV WHKLVR+ R P N +PA + D SD DS+S GD P+ RR + GRPRA R FVG++K+KW QV R
Sbjct: 30 SCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLR------------VCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQP-PDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQPSPEVETDVPAPPPDQLM-----RPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPLDGEVDRVDDSSDXXXXNDSDVEES-IIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLERCLPGRN---HPAPT-DRSDDDSESS----GDDXPXXXXXIGXXXXXXXDVPATRRPAR--GRPRANRLRFVGDFKNKWHQVPR 1167
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 1154 bits (2984), Expect = 0.000e+0 Identity = 713/1672 (42.64%), Postives = 922/1672 (55.14%), Query Frame = 1
Query: 1777 FKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGAVEGTSTSPVDDTCQTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC-----------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVMD------SD----VIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKT-----------------------------NGMLAQKLAAAEETSKRQAQNASFTASPDQ--QQDNRDRAEIHLSDYG-DDEPGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASMADDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNR-PNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAKPFGNRIVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVM-GT-GRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFLKDPGSFTPAYATLD-----DIGEAGPRPPKKQPRQPGRHGPGATRR----VAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLQLLRDSMFDECALSPNI 6471
F + GLFV A+FDLFPHG+GGHLD R R ++ ++WA+ILLR+RD RFRK ++FLFCV ALIFRREAI+NARWKLTG +S + TLA++TP+DL AAA ME G S L++R V L+ TM SVHAG+SWT +NKR TRMIAIS IMQ+GQPL W+TI PAD SP+ +LRLVA+DPVASA +H+ D VL+CLLRF A DGDGG+L RVKGY+GMT+EQ+RL+LH H+LVWV+G+NDF+SFRDLMD+ P +Y +LA++L+ +IFNQV +FA++ MHG S + +P N + P FP +RC +HD +Y R MY DL+E+ PGA LH+CQ TC K+N+ + C +A +R L +HIN +NP+I F IRSNMDL V+LRDSDA+G+L+Y+L+YSTK+EQTLDVLLPLL+PVV+RIR+ +G KE AVRLVRSCLCKQL+SLNIGGPAAASKV +PD KISH V CPM PLL WASSRD P + PDDG DS + D SD V+++ G+LT+ + A++LY +RC P+DT H LHGMSYV W +LVR RY P +Y CR Q+V+R+ P M+NIMRDIPR DT+P AHCRLLLC++V F L+DLK GML Q++AA EE + R+ + A + S Q + + EI L+D G DD+ +SV + + + FVHDA +F++AG G+DS Q D + + + + E S AR +R+ N VA+TD+G + QH VA IAQEFGLNR+QRLAF+IFANG+ A+ R P+ P + G +L VA+QGKQAASVGGTT+HSVC+ R G DHDDQ L + +A+ W+G SVLA++E SMVGC + L KAAC +FP+HK KPFGN + V GDF+QL R L S DV N V+ GT G A +D +VI RNKV T LT+P MRTWC++ GTTLFI+ A D +VG + G E P A WP LR E+ SLDD KT DLP CLA+G P+V+HKSPQ VLLGVC+N DGI+R IELD RE GY VV L++ P+RVFV+I+S DD+GL L G RGV+A P+ER + G N R FT KRRQ+PLT+GCLSSV ++ILD+R+PPG +D A++YVA SRA L+D LLFPVTL DL++P++ D++A++ L RL T+ F DP +F P+ +L D GE R G G GA+RR AHL+PN NNCFFNSA+AL LA +DG P+ + TPAA +F ++L++D+M + +I
Sbjct: 230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTPRASS-----EPEPEN--------VSDPLHAFP---VERCFVHDDSYPRFMYLDLAELVPGAQLHRCQPTCHKFNNRDKCRFGYGDKGKSFEQETTVVRGPCTFHTNGSMTINGVDAFNECVSASSEPESDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTPDE----EPDDG-DSTSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTPFKK-----------------AYN-----------------------CR-----------QRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGDSWTTAMANVEQHDRWDKRTKPFRLNIAGMLRQRIAADEERAYREEEEAFVSGSSGQGMEMGSDGEDEIILNDLGGDDDDDQSVFLVTKQGILMQAFVHDAHDAFVSAGLRGNDS--------------QAATRD--------------------------------------------------------VMCWFVPV-----ECKSINARRDRN------NQEVARTDIGAAAPSQHPVAFRIAQEFGLNREQRLAFYIFANGIFAKKRSPHSP----------------------------------IEEGGMLAVAFQGKQAASVGGTTIHSVCNVPGRKGSGGK-DHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQL--------------------------------------------------------RFLHSRSTYSDVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQIQNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPLTSGCLSSV---------RVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIPSATSLPTDSDYDSGE------NDGGRGSGWLG-GASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 892 bits (2306), Expect = 1.640e-268 Identity = 531/1218 (43.60%), Postives = 691/1218 (56.73%), Query Frame = 1
Query: 469 FVPVVSTPPVLACDSPEGQIDGHDRPHMLDHIHHPSVLHKCLSDFTNHMVNSVRSVSCAICDRNCKSIDCKLVAAEDLPHKDLLTADDNLLACQAVRHTFFNYPGDDAKLLHGLVLERLGFEGESPWRLQPHLTSPLTQLCYVCKKCLQSLLKKRMPEAALANGLWLGEFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDRDNHLVGKHILARQAQLAPENLAGYSNDGSIPKAVLDAILPVKDSANAYANARSTHAHGNRDN----DPAPDGGIGSRVDDHDPTAPFVIETNAVIDTGDDLAVAGASKPHRLRDLGRAMQTASG--GPSLGQAAAAHAAVLAGRPSPVG---------------------TDNALVLTRSGRMVSDFKNAGLFVGAYFDLFPHGVGGHLDRRPRPLTLKKWAQILLRRRDARFRKSRTFLFCVCALIFRREAIENARWKLTGSISAADSRTLASVTPDDLTAAAAAMENGGGTASVLSDRARVAALIKTMASVHAGASWTPHNKRFTRMIAISYIMQMGQPLIWITINPADINSPVVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATFADITRVMHGAVEGTSTSPVDDTC--QTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC------------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVMD-----------SDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVSPSGRRASART-GRPRACRYDFVG 3747
+ P V+ PV A + PEG+ DGHDRP + + S+L KC++DF +M +++ SVSCA+CD C+ IDC+ V+A +LP++ LLTA +L A ++ + +YPGD K L GLVL R GFE RL+ VC +CL+ L + P A LANGLW+G+FPEHL+ +T+VEM AASPVR SGMV AL++LK G++ GSA MRGTFTF+ Q+AYGV+ LP CDTDIAGS TCALVG +P AQLR+LLGARR +Q+L+DFQ D N L G+H+L ++AQ + ENL + DGS+P +LD+++P D++ A S++ NR D A + G DD+ F+I+ AVI +G + AV+ S+P RLR L + ++G P+ A PS T N LVL +G+MV DF G+ + AYFDLFPHGVGGHLD+R RPL KWA+ LLRRRD RFRK+RTF+FC+ A+IFRREAI NA WKLTG +S ++ L +TPDDL A A +E G TA L++R LI+TM SV+ ASWT NKR RM AIS I+Q+GQPL W+TINPAD NSPVV+K+ GVD+DVSS+LK + P YV +L+L+A DPVASA+FFH ID V+ LLRFGA DGDGG+LGRVK YVGMTEEQ+RL LHCHLLVWV Y ELA +L IF+QVA+ D+ M G +E S +P D T DP R A E + PP+ CFP G +R D+ Y + +L+EIT AN+H+C TC K+ H NSC +A RR H +NS+N +I F RSNMD+K LLRDSDA+G LFYILNYSTKTE T+D LL +L PVVERI++EA+GA A +LVR+C CK ++ + +G PAAASKVL+ D K + CPM PLL AS+ D P +GS+ + S I+ GK+ ++ + LY RC P+DT H HGM Y W +LVR+ R+ PA+ + D D +S A+ R GRP A R+DFVG
Sbjct: 2172 YAPTVTETPVTAFNHPEGRSDGHDRPALTKDVLGTSMLFKCIADFHTYMADNIHSVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTNKCLDGLVLAREGFESGPLHRLR------------VCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDGQNADDN---PAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINSAGTAAPTAMDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTGGIEP-SNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTDAKSAPDARTCPMKPLLALASAS-----FDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTP----RKQKPARRPN-DDNDRESGXXXXXXXXXXXXXXAARRKRGRPLAKRHDFVG 3344
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 803 bits (2075), Expect = 9.020e-267 Identity = 401/438 (91.55%), Postives = 411/438 (93.84%), Query Frame = 1
Query: 5182 MLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGTGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTSTAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLDDLNLLFPVTLQDLNQPQNPDIIAVVKYLHRLDDATMELFLKDPGSFTPAYATLDDIGEAGPRPPKKQPRQPGRHGPGATRRVAHLIPNEYNNCFFNSALALALAAWDGQPLPDAAAGTPAAGSFFAVLQLLRDSMFDECALSPNIVVQAQQAR 6495
MLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGT R+ADSLFDARVIAFRNKVNTVLTVPMMRTWCKA GTTLFIA AHDVYVGHQRPGA AEVPPTDAPWPA LRREI SLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPRE Y +STAGYSVVTLRYAPLR+FVYIKSAD AGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTM KIILDIRRPPGHA+DCAAVYVALSRATGL DLNLLFPVTLQDLNQPQNPDI+A+V YLHRLD+ TM LFLKDPGSFTPAYATLD I EAGPRPP KQP++ GRHGPGATRRVAHLIPNE NNCFFNSALALALAAWDGQPLPD AGTPAAGSFFA LQLLRDSMFDEC LSPNIV + Q R
Sbjct: 1 MLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMGTSRKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREGYASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPPHKQPKRVGRHGPGATRRVAHLIPNEDNNCFFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIVRKMAQVR 438
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 775 bits (2001), Expect = 4.080e-251 Identity = 439/768 (57.16%), Postives = 529/768 (68.88%), Query Frame = 1
Query: 3793 MINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKT-----------------------------NGMLAQKLAAAEETSKRQAQNASFTASPDQQQDNRDRAEIHLSDYG-DDEPGRSVIPTSARRLQTDFFVHDALRSFLAAGFSGDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASM--ADDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAK-PFGNRIVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESNRFTPIYAPIMERCLRSECISDDVDLINNHVMG--TGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDYHTS-TAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMRKIILDIRRPPGHAM 5988
M NIM+D+PR DTQPVAH RLL+C++VPFFTLDDLK GMLAQKLAAAEET+KR A+ + DN ++ L YG +DEPG SVIP + RR+ TD FV+DA R+F+AAGF+GD S D + PLLSGR+ + T D S + GTD+ AAT S++RQE+ +D + ++ S G P+ P ++ LR+AS +GLS +A RD RR TNA VA TD+G + LQH A +IAQEFGLNRKQR AF+IFANGLL+Q RP+PP ALR+YIGGGAGTGK+HVL+AI+AF++ P V +PR RLL VA+QGKQAA+VGGTTVHSVC G LSG H+ QS+LP ++A HW+ +LAIEE SM+ CNLL +LH ACSMFPLHK + PFGNR+VVMLGDF+QL P+KA+SLA + RR MTVTERYG+DLFR ANACVMLDESNRF+P YAP+MERCL S+C DDV L+N VMG T R A S FDA +I FRNK + T + N AP+ ++ P + P T+APWP LR EI SLDD T DLPT A LA+GAPVV+HK PQFVLLGVCNNSDGIIRGIELDP ED+ T GYSVV LRYAPL+VFVYIK+ADDAGLHL+GL RGV+A+APVE++ TI GI K KF FKRRQ+PL AGC+SSV+RSQGQTM KIILDI PPG AM
Sbjct: 1 MANIMKDVPRSDTQPVAHARLLICLFVPFFTLDDLKRADETWPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKRHAERQLLSEKTHALGDNM-AGDVLLDSYGGEDEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSPLLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVPNEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTGDSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLRPIKARSLAHLTALQERRLGMTVTERYGSDLFRMANACVMLDESNRFSPTYAPVMERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEYALAT--------RTN------APSPIPFLHLFFP----QKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAM 749
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE) HSP 1 Score: 609 bits (1570), Expect = 1.610e-184 Identity = 462/1318 (35.05%), Postives = 615/1318 (46.66%), Query Frame = 1
Query: 2593 MDRTPARYTELAQYLDNIIFNQVATFADITRVMHGAVEGTSTSPVDDTC--QTDPNNRHAKECLPTAPPTDCFPRDGEDRCPIHDQAYARLMYHDLSEITPGANLHKCQATCTKYNHLNSC------------------------------------------------------------------------------------SADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRNEADGADDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVLCPMSPLLTWASSRDGPLDGDTSRPDDGSDSETEDVMD-----------SDVIITPFKGKLTMAKRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVVRYDPLDNRQPNPAQSSDASDTDSDSYTMQPGDPVSPSGRRASART-GRPRACRYDFVGEYKHKWQQVLREKPAMINIMRDIPRKDTQPVAHCRLLLCMYVPFFTLDDLKT------------------------------NGMLAQKLAAAEETS---------KRQAQNASFTASPDQQQDNRDRAEIHLSDYGDDEP-GRSVIPTSARRLQTDFFVHDALRSFLAAGFS--GDDSLPDIAFPLLSGRTRQQTMEDASHIILGTDVAAATLSVARQESSLEQKSTSCAASMADDAQPVSSLSYLTGADGGPPIQPYLIRLREASHEGLSAQARGERDARRLATNATVAQTDVGRTSTLQHSVAVSIAQEFGLNRKQRLAFFIFANGLLAQNRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAVAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDGGNLSGDHDDQSSLPDTKAMHWKGVSVLAIEEVSMVGCNLLAQLHKAACSMFPLHKAKPFGNRIVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDESN-RFTPIYAPIMERCLRSECISDDVDLINNHVMGTGRRADSLFDARVIAFRNKVNTVLTVPMMRTWCKANGTTLFIAPAHDVYVGHQRPGAVAEVPPTDAPWPAELRREIMSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREDY-HTSTAGYSVVTLRYAPLRVFVYIKSADDAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQ----------------------------GQTMRKIILDIRRPPGHAMDCAAVYVALSRATGLD 6036
MD+TP Y ELA +L IF+QVA+ D+ M G +E S +P D T DP R A E + PP+ CFP G +R D+ Y + +L+EIT AN+H+C TC K+ H NSC +A RR H +NS+N +I F RSNMD+K LLRDSDA+G LFYILNYSTKTE T+D LL +L PVVERI++EA+GA A +LVR+C CK ++ + +G PAAASKVL D K + CPM PLL AS+ D P +GS+ + S I+ GK+ ++ + LY RC P+DT H HGM Y W +LVR+ R+ PA+ + D D +S A+ R GRP A R+DFVG QQV RE+P +INIMRD+P++DTQP H +LLLC+Y PFF + DL+ GML Q+ AA EE +R+ A A D +I +D D +P G +V+P + + +V++A+ L AGFS +D LP A LLSGR+ Q DAS +++ L+ + T A ++ DDA V++ AD + PYL LR S GLS A+ D RR TN VA+TDVGR+S QH IA EFGLNRKQRLAFFIF +A++ P ALR+++ GGAG+GKS+VL+AI A I+CPA+ V G LLTVA+QGK AA+VGG TVHSV ++ + Q+ L + KA W + LAIEEVSMV C L LHKAA S+ P + PF I V GD +QL+PV AKS+ GA S+ MT TER G F +ANA V+LDE+N RF+ YAP+M+R LR DV+ N +G+ R L DG L C +K+ + I I+LDPRE GY VV L + P+RV ++I++A DAGLHL L RG +AV R F + G++ +K++FKR Q+PL G LSSVYR+Q G+T++ ++L + +P MD +A YVALSRAT +
Sbjct: 1 MDKTPDSYQELASFLSRTIFSQVASDEDVQHAMTGGIEP-SNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASAS-----FDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTP----RKQKPARRPN-DDNDRESGXXXXXXXXXXXXXXAARRKRGRPLAKRHDFVGLPTVHKQQVTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEENRASSVLQSLRRRRPLGACGGADID--------GDIFGADVDDTDPAGPNVMPPARNAHRVSAYVNNAVDRCLDAGFSRTDNDRLPQAA--LLSGRSSHQIAADAS-----------------KDALLKTRETEAATAVPDDAPDVAATKPYN-ADA---LSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTIGQTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNRFSATYAPVMDRVLRRVSTVTDVEAFNARTLGSFSR--------------------------------------------------------------------------LPDGTLAKLSMKHCWMAQTITFRNKA---------TSEKATIVSIDLDPREAIVDGEPEGYRVVHLVHPPVRVVIFIQTAYDAGLHLPSLNRGEVAVGVESRSFDVRGLHDKKYSFKRGQLPLLPGHLSSVYRAQHFIHAYMHTSVLPQLVSFCLSSCYLSSKGETIKTLLLHMTKPVDGVMDPSAAYVALSRATSFE 1193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1450.3461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1450.3461.1 >prot_Ecto-sp13_S_contig1450.3461.1 ID=prot_Ecto-sp13_S_contig1450.3461.1|Name=mRNA_Ecto-sp13_S_contig1450.3461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2504bp SRGRGRPRRPSTCSRPFFACEGRRDLQSVEIFALGSTGPGGRATPTSTAQback to top mRNA from alignment at Ecto-sp13_S_contig1450:3785..13882+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1450.3461.1 ID=mRNA_Ecto-sp13_S_contig1450.3461.1|Name=mRNA_Ecto-sp13_S_contig1450.3461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10098bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1450:3785..13882+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1450:3785..13882+ >mRNA_Ecto-sp13_S_contig1450.3461.1 ID=mRNA_Ecto-sp13_S_contig1450.3461.1|Name=mRNA_Ecto-sp13_S_contig1450.3461.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=7512bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1450:3785..13882+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |