prot_Ecto-sp13_S_contig14447.3419.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14447.3419.1
Unique Nameprot_Ecto-sp13_S_contig14447.3419.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length189
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14447.3419.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 5.480e-49
Identity = 103/191 (53.93%), Postives = 136/191 (71.20%), Query Frame = 0 
Query:    1 MKMFEACLYDANVGVRDTALKAACSYLPGP-SAVAASSLVPKMMSVLEASFFFVGEGVAGDVLEALNVVAANQPLMLIGDP--RSLDVVGSAMLSLAGSHTLKDSTREMSLEVITGLCESAPSVFREGGGGIVGAVVPLTMNMVARHPEGDESEEELVAWLSTAGGS-EDDMNGHLDGDGLCNVFANALHR 187
            ++MF A L D  +GVR  ALKAACS+L    SA  A SLVP++MSV+EA+     E  AGDVLEALNV+A+NQPL+L+G+   ++L++V +AML+LAGS TL+ STRE+SLEV TGLCE APSV RE G  +V   VPLT+NM+A+ P+  + EEEL +WLS +GGS   D +   +G  L  + A+AL R
Sbjct:  182 LQMFGASLEDPTIGVRVAALKAACSFLQDSLSAAVAPSLVPRIMSVVEATVNSGDEAAAGDVLEALNVIASNQPLLLLGESGDQTLEMVSTAMLTLAGSPTLETSTRELSLEVFTGLCECAPSVLRERGATVVNVAVPLTINMLAQPPQDFDDEEELGSWLSMSGGSGRGDDDADAEGGELSMIAASALSR 372
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BLAST of mRNA_Ecto-sp13_S_contig14447.3419.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 3.630e-48
Identity = 104/194 (53.61%), Postives = 137/194 (70.62%), Query Frame = 0 
Query:    1 MKMFEACLYDANVGVRDTALKAACSYLP----GPSAVAASSLVPKMMSVLEASFFFVGEGVAGDVLEALNVVAANQPLMLIGDP--RSLDVVGSAMLSLAGSHTLKDSTREMSLEVITGLCESAPSVFREGGGGIVGAVVPLTMNMVARHPEGDESEEELVAWLSTAGGS-EDDMNGHLDGDGLCNVFANALHR 187
            ++MF A L D  +GVR  ALKAACS+L     GPSA  A SLVP++MSV+EA+     E  AGDVLEALNV+AANQPL+L+G+   ++L++V +AML+LAGS  L+ STRE+SLEV TGLCE APSV RE G  +V   VPLT+NM+A+ P+  + EEEL +WLS +GG+   D +   +G  L  + A+AL R
Sbjct:  177 LQMFGASLEDPTIGVRVAALKAACSFLQDSLSGPSAAVAPSLVPRIMSVVEATVNAGDESAAGDVLEALNVIAANQPLLLLGESGDQTLEMVSTAMLTLAGSPALETSTRELSLEVFTGLCECAPSVLRERGATVVNVAVPLTINMLAQPPQDFDDEEELGSWLSMSGGNGRGDEDADAEGGELSMIAASALSR 370
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14447.3419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCW6_9PHAE5.480e-4953.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FNE2_ECTSI3.630e-4853.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..188
e-value: 1.9E-18
score: 67.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14447contigEcto-sp13_S_contig14447:2004..4034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14447.3419.1mRNA_Ecto-sp13_S_contig14447.3419.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14447 2..4034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14447.3419.1 ID=prot_Ecto-sp13_S_contig14447.3419.1|Name=mRNA_Ecto-sp13_S_contig14447.3419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
MKMFEACLYDANVGVRDTALKAACSYLPGPSAVAASSLVPKMMSVLEASF
FFVGEGVAGDVLEALNVVAANQPLMLIGDPRSLDVVGSAMLSLAGSHTLK
DSTREMSLEVITGLCESAPSVFREGGGGIVGAVVPLTMNMVARHPEGDES
EEELVAWLSTAGGSEDDMNGHLDGDGLCNVFANALHRSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like