prot_Ecto-sp13_S_contig14444.3416.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14444.3416.1
Unique Nameprot_Ecto-sp13_S_contig14444.3416.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length349
Homology
BLAST of mRNA_Ecto-sp13_S_contig14444.3416.1 vs. uniprot
Match: A0A6H5KRN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN6_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 1.230e-79
Identity = 223/257 (86.77%), Postives = 226/257 (87.94%), Query Frame = 0
Query:  104 RLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAFCSYHACPDSYIPIEDAGTTRCNNDNCTTEQCCVSGDTGXXXXXXXXXXGG------------VLYCNSIGCPGGYTPIPNAREVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPVGVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXXNNDNCTTEQCCEAH 348
            R+ EGLCNSIGCP GFTPIPYAWEVECGDSCDVATCCEAF             EDAGTTRCNNDNCTTEQCCVSG+  XXXXXXXXXXGG            VLYCNSIGCPGGYTPIPNA EVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPP GVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXXNND+CTTEQCCEAH
Sbjct:   10 RVHEGLCNSIGCPDGFTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXEDAGTTRCNNDNCTTEQCCVSGNXXXXXXXXXXXXGGNXXXXXXXXXXXVLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXXNNDDCTTEQCCEAH 266          
BLAST of mRNA_Ecto-sp13_S_contig14444.3416.1 vs. uniprot
Match: D8LCY4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY4_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.530e-71
Identity = 220/281 (78.29%), Postives = 223/281 (79.36%), Query Frame = 0
Query:   68 RMPRLSLTFVTGLVALQSAAGASLRSSNGVAAADGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAFCSYHACPDSYIPIEDAGTTRCNNDNCTTEQCCVSGDTGXXXXXXXXXXGGVLYCNSIGCPGGYTPIPNAREVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPVGVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXXNNDNCTTEQCCEAH 348
            RMPRLSLTFVTGLVALQSAAGASLRSSNG AAADGRRLQEGLCNSIGCPGG+TPIPYAWEVECGDSCDVATCCEAF                GT RCNNDNCTTEQCCVSGD       XXXXXGGVLYCNSI                            EA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPP GVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXX ND+CTTE+CC  H
Sbjct:    8 RMPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGGYTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXXXXGTIRCNNDNCTTEQCCVSGD---GQGPXXXXXGGVLYCNSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVVXXXXXXXXXXXXXXXXXXXXXXXGDCDVGQCCEAXXXXXXXXXXXXXXXXXXXXXXXNDDCTTEECCVFH 285          
BLAST of mRNA_Ecto-sp13_S_contig14444.3416.1 vs. uniprot
Match: D7G5E9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E9_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 3.700e-70
Identity = 169/206 (82.04%), Postives = 173/206 (83.98%), Query Frame = 0
Query:   69 MPRLSLTFVTGLVALQSAAGASLRSSNGVAAADGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAFCSYHACPDSYIPIEDAGTTRCNNDNCTTEQCCVSGDT--GXXXXXXXXXXGGVLYCNSIGCPGGYTPIPNAREVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQ 272
            MPRLSLTFVTGLVALQSAAGASLRSSNG AAADGRRLQEGLCNSIGCPGGFTPIP AWEVECG SCDVATCCE                  GTTRC +D CTT QCCVSG+T  G  XXXXXXX GG LYCNSIGCPGGYTPIPNA EVEC  DSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSG+TG+GQ
Sbjct:    1 MPRLSLTFVTGLVALQSAAGASLRSSNG-AAADGRRLQEGLCNSIGCPGGFTPIPNAWEVECGHSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTDDYCTTPQCCVSGNTRKGEQXXXXXXXAGG-LYCNSIGCPGGYTPIPNAWEVECYDDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGDTGDGQ 204          
BLAST of mRNA_Ecto-sp13_S_contig14444.3416.1 vs. uniprot
Match: A0A6H5JPS1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS1_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.780e-13
Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = 0
Query:  193 GVLYCNSIGCPGGYTPIPNAREVECSGDSCEVSQCCEA 230
            G  YCNSIGCPGGYTPIPNA EVEC  D CEVSQCCEA
Sbjct:    4 GKTYCNSIGCPGGYTPIPNAWEVECDDDPCEVSQCCEA 41          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14444.3416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRN6_9PHAE1.230e-7986.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCY4_ECTSI1.530e-7178.29Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G5E9_ECTSI3.700e-7082.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPS1_9PHAE3.780e-1384.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14444contigEcto-sp13_S_contig14444:203..3926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14444.3416.1mRNA_Ecto-sp13_S_contig14444.3416.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14444 203..3926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14444.3416.1 ID=prot_Ecto-sp13_S_contig14444.3416.1|Name=mRNA_Ecto-sp13_S_contig14444.3416.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
MTRKVLVGCEDIHANHHQAKVVPTVSSANNQRVIFTTSFTLTPQPPPPHN
QPPSLLVPHPTSPSPSSRMPRLSLTFVTGLVALQSAAGASLRSSNGVAAA
DGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAFCSYHACP
DSYIPIEDAGTTRCNNDNCTTEQCCVSGDTGGGQGPPPPPPGGVLYCNSI
GCPGGYTPIPNAREVECSGDSCEVSQCCEAYCSYYACPDSYIPIEDAGTT
RCNNDDCTSEQCCVSGNTGEGQPPVGVVYCNSIGCPGGYTPIPNAWEVEC
SGDCDVGQCCEAYCSYHACPDNYIPIEDAGTTRCNNDNCTTEQCCEAH*
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