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Homology
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: D8LKB3_ECTSI (Nibrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB3_ECTSI) HSP 1 Score: 782 bits (2019), Expect = 1.950e-273 Identity = 575/788 (72.97%), Postives = 585/788 (74.24%), Query Frame = 1
Query: 184 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQEWSAGRQSHFVPAGPEAPLSAKAKAVLASRGEVLEDVGMEATDKTQLTEAVVYLQSLVNVREAMRASSSSVAPMAVNTSSEAWGPSQSLATSQLTKGLPARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASERKKDVADGMSVDKDDDGAVAGGSVGQTVKEPEEEMEGGPANDPVAKGKRSAARRTRGREREDEPGRDAXXXXXXXEVKDGAWGAERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLERKGRGSQQRSSVPTPAPGGWMTAHNASSSQKDKRPGGGRVRKAGGVGGDTEGEVEEDEDGEERARLATPADPAVTEMCRQGLCFVPLVAKAVSRSAPMGYSRSSTARPVGGRRGPAVPNFKRFKKNTIMFGGEQVAAYVPLAALRSTLPKESERELALAE 2547
MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVG VPGNDPTEQPIWVKDVGSKLKTCVNG+ETGE H+EISLK+GDEVKVGTTNSIM RVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDA KCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPET AFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQEWSAGRQSHFV AGPE LSAKAK VLASRGEVLEDVGMEATDKTQLTEAVVYLQSLVNVREAMRASSSS+APMAVNTSSEAWGPSQSLA SQ AR A XXXXXXXXXXXXXXXXXXXXXXXXX D+ DGA ++ EG P P PG D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VP PAPGGWMTAHNASSSQKDKRP GGRVR AGGVGGDTEGEVEEDE+GEERARLATPADPA+TEMCR LVAKAVSRSAPMGYSRSS+ARPVGGRRGPAVPNFKRFKKNTIMFGGEQVAAYVPLAALRSTLPKESERELALAE
Sbjct: 1 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTEQPIWVKDVGSKLKTCVNGSETGETHKEISLKEGDEVKVGTTNSIM-RVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETEAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQEWSAGRQSHFVQAGPEVSLSAKAKGVLASRGEVLEDVGMEATDKTQLTEAVVYLQSLVNVREAMRASSSSIAPMAVNTSSEAWGPSQSLAASQDE----ARGAERRGXXXXXXXXXXXXXXXXXXXXXXXXXD---------------------------------------------DQIGDGA--------------DDAEGVPVAGPT-------------------PGGD--------------------------------------------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAPAPGGWMTAHNASSSQKDKRPRGGRVRVAGGVGGDTEGEVEEDENGEERARLATPADPAITEMCR-------LVAKAVSRSAPMGYSRSSSARPVGGRRGPAVPNFKRFKKNTIMFGGEQVAAYVPLAALRSTLPKESERELALAE 630
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A6H5JUA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA3_9PHAE) HSP 1 Score: 684 bits (1765), Expect = 6.430e-236 Identity = 438/492 (89.02%), Postives = 447/492 (90.85%), Query Frame = 1
Query: 184 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQEWSAGRQSHFVPAGPEAPLSAKAKAVLASRGEVLEDVGMEATDKTQLTEAVVYLQSLVNVREAMRASSSSVAPMAVNTSSEAWGPSQSLATSQLTKGLPARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------SASERKKDVADGMSVDKDDDGAVAGGSVGQTVKEPEEEMEGGPANDPVAKGKRSAARRTRGRERED 1620
MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVG VPGNDPT+QPIWVKDVGSKLKTCVNG+ETGEAH+EISLK+GDEVKVGTTNSIM RVRFQALRFCATQLTAEEKAELKALSK+CGGAVSRKWDA KCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDL AGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQ+WSAGRQSHFVPAGPE LSAKAKAVLASRGEVLEDVGM ATDKTQLTEAVVYLQSLVNVREAMRASSSS+APMA+NTSSEAWGPSQSLA SQL KG PA AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S ERK DVADGMSVDKD VKE EE+MEGGP ND VAKGKRSAARRTR ERED
Sbjct: 1 MAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGPVPGNDPTDQPIWVKDVGSKLKTCVNGSETGEAHKEISLKEGDEVKVGTTNSIM-RVRFQALRFCATQLTAEEKAELKALSKRCGGAVSRKWDAAKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLVAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAMSDDDFAGQDWQKWSAGRQSHFVPAGPEVSLSAKAKAVLASRGEVLEDVGMAATDKTQLTEAVVYLQSLVNVREAMRASSSSIAPMAMNTSSEAWGPSQSLAASQLAKGRPATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLERKDDVADGMSVDKDXXXXXXXXXXXXAVKELEEKMEGGPGNDSVAKGKRSAARRTRAHERED 491
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A1A9V462_GLOAU (FHA domain-containing protein n=3 Tax=Glossina TaxID=44049 RepID=A0A1A9V462_GLOAU) HSP 1 Score: 85.1 bits (209), Expect = 2.920e-13 Identity = 73/231 (31.60%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 199 HTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNG----NETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKD--ELVETIVEAAG 873
+T+GR + + D SVSR HA ++ + ND Q +KD+GSK T N N+ E +SLK D ++ G ++ V+ L + LT +E+ +++ + GG V +W T CTHL L N SS+T KL+ ALL +PV+ +LKDL AK + P+P + P + F + R+T L G F LH+ ++ +V++AG
Sbjct: 22 YTVGRLDADLELLNDSSVSRAHAVFQLIVKTKNDVQLQ---LKDLGSKYGTFHNKDIEKNKRLNKDECLSLKANDRIRFGRFENVWE-VKNHVLNVVISSLTKKEQTDVEEILGYMGGQVFTEWSNT-CTHL--LMNGSSITIKLLYALLNQKPVITSNYLKDLLKAIRAKKV-PLPNVEHYRPCFNEA-----FDLSRQPKRQTLLRGYTFIFLHRKHADMYGPLVQSAG 239
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A1V9YMP5_9STRA (FHA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMP5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.450e-10 Identity = 75/272 (27.57%), Postives = 126/272 (46.32%), Query Frame = 1
Query: 127 MWLLDVLDPKIGDVSTTVAMAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPT-EQPIW-VKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIM--SRVRFQALRFCATQLTAEEKAELKALSKKCG--GAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGG----ALCRAYAMSDDD 912
MW+LD + + + G TLGRKG++++FP D S+SR+HA ++VG + D ++P + + D S+ T VNG + E + + L+ GD++ G ++++ S VR A +++ +KA + L + C G + TH + A TEK++ AL+ PVV W++ + A + +P F PV + P + T RR L DF + + +++A GG A C A D D
Sbjct: 9 MWVLDWESEGVA-----LRLVHGEWTLGRKGNALNFPNDSSISRQHAVLKVGALEHLDRIHDRPTFTLVDSKSRFGTFVNGAQIPE-NVPVDLRVGDKITFGAKSTVLVVSYVRMVA------RISRIQKANRRRLLEGCKYIGMHVVSDPIPEITHCIMDAGNFVATEKILWALVHAHPVVSSDWIQAVLARDSLS--SDLPRCEGFLPVHAADQAATPSYLLDT--RRCSLYNDFIVVFLVPTSMVALLQAMGGQVLAAFCDPSAAHDAD 264
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A1B0B7Y5_9MUSC (Uncharacterized protein n=3 Tax=Nemorhina TaxID=44051 RepID=A0A1B0B7Y5_9MUSC) HSP 1 Score: 75.5 bits (184), Expect = 2.880e-10 Identity = 66/231 (28.57%), Postives = 110/231 (47.62%), Query Frame = 1
Query: 199 HTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNG----NETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTRSRRQGPFRVRHTADRRTHLSGDFFAILHKD--ELVETIVEAAG 873
+T+GR + + D SVSR HA ++ + ND Q +KDVGSK T N N+ E + LK D ++ G ++ V+ L + L+ E+ +++ + GG + +W T CTHL+ N SS+T KL+ AL+ +P++ +LKDL AK + +P + P + F + R+T L F LH+ ++ +V++AG
Sbjct: 22 YTVGRLDADLELVNDSSVSRAHAVFQLIIKSKNDVQLQ---LKDVGSKYGTFHNKDIEKNKRLNKDECLPLKANDRIRFGRFENVWE-VKNDVLNVVTSSLSKREQTDVEEILGYIGGQIFTEWSNT-CTHLIM--NGSSITIKLLYALINQKPIITSNYLKDLLKAIRAKKVS-LPNMEHYRPCFDET-----FDLSRQPKRQTLLRDYTFIFLHRKHADMYGPLVQSAG 239
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A7S3RE56_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RE56_EMIHU) HSP 1 Score: 68.6 bits (166), Expect = 7.540e-9 Identity = 63/205 (30.73%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 127 MWLLDVLDPKIGDVSTTVAMAEGIHTLGRKGSS-VSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLT-AEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFG 735
MWL+ +G + V +EG +T+GR S+ V+ D+S+SRKH E+RVG + + + D+GSK T V+ ++ SL DG + +G + VR + L C + L+ A+ + A ++ G + S++W +HLV + +T KL+LAL PVV W++ +AA A P+P+ +A G
Sbjct: 9 MWLIADGSQTLGRLP--VPGSEGPYTVGRHESADVTVTGDKSISRKHLELRVG------EDGRTLRLTDLGSKFGTSVDNSKVDPGGT-ASLVDGASLSLGAK---VLTVRHEPLVLCYSGLSKADTEVVQAAAARLVGVSASKEWADGHTSHLVM--SKIKLTPKLMLALAHGCPVVAPAWVERVAARKAA--AEPLPDPSAVG 197
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: R1BFD2_EMIHU (FHA domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BFD2_EMIHU) HSP 1 Score: 68.6 bits (166), Expect = 2.510e-8 Identity = 63/205 (30.73%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 127 MWLLDVLDPKIGDVSTTVAMAEGIHTLGRKGSS-VSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLT-AEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFG 735
MWL+ +G + V +EG +T+GR S+ V+ D+S+SRKH E+RVG + + + D+GSK T V+ ++ SL DG + +G + VR + L C + L+ A+ + A ++ G + S++W +HLV + +T KL+LAL PVV W++ +AA A P+P+ +A G
Sbjct: 1 MWLIADGSQTLGRLP--VPGSEGPYTVGRHESADVTVTGDKSISRKHLELRVG------EDGRTLRLTDLGSKFGTSVDNSKVDPGGT-ASLVDGASLSLGAK---VLTVRHEPLVLCYSGLSKADTEVVQAAAARLVGVSASKEWADGHTSHLVM--SKIKLTPKLMLALAHGCPVVAPAWVERVAARKAA--AEPLPDPSAVG 189
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: R1FKA0_EMIHU (FHA domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FKA0_EMIHU) HSP 1 Score: 68.6 bits (166), Expect = 2.910e-8 Identity = 63/205 (30.73%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 127 MWLLDVLDPKIGDVSTTVAMAEGIHTLGRKGSS-VSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSRVRFQALRFCATQLT-AEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFG 735
MWL+ +G + V +EG +T+GR S+ V+ D+S+SRKH E+RVG + + + D+GSK T V+ ++ SL DG + +G + VR + L C + L+ A+ + A ++ G + S++W +HLV + +T KL+LAL PVV W++ +AA A P+P+ +A G
Sbjct: 209 MWLIADGSQTLGRLP--VPGSEGPYTVGRHESADVTVTGDKSISRKHLELRVG------EDGRTLRLTDLGSKFGTSVDNSKVDPGGT-ASLVDGASLSLGAK---VLTVRHEPLVLCYSGLSKADTEVVQAAAARLVGVSASKEWADGHTSHLVM--SKIKLTPKLMLALAHGCPVVAPAWVERVAARKAA--AEPLPDPSAVG 397
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A139AMD5_GONPJ (NIBRIN_BRCT_II domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMD5_GONPJ) HSP 1 Score: 65.5 bits (158), Expect = 2.150e-7 Identity = 60/197 (30.46%), Postives = 94/197 (47.72%), Query Frame = 1
Query: 127 MWLLDVLDPKIGDVSTTVAMAEGIH-TLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTE----QPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSI-MSRVRFQALR----FCATQLTAEEKAELKALSKKCGGAVSRKW-DATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKDLAA 684
MW+L P TTV + G ++GRK ++++P+++S+SR HA VG V T+ + + D L T VNG + EA + DGD++ G T + + VRF+ R C + + K E+ L+ + W DA CTHL L ++ VT K+V L R +V W++ L+A
Sbjct: 1 MWILTGDSPSTH--GTTVWLKPGKEVSIGRKDGTLTYPQEKSISRSHAAFVVGNVVEGMVTDLNRFPSVTLTDNSKFLYTFVNGVPSTEATRIRQVADGDQLSFGNTIADGLPLVRFRLKRSPVVLCLSGVPKNVKKEMTGLAAVLDLKIEPDWTDA--CTHL--LMHSLKVTYKVVACLADCRHIVSDNWVRALSA 191
BLAST of mRNA_Ecto-sp13_S_contig1443.3405.1 vs. uniprot
Match: A0A0M0JXZ0_9EUKA (Nibrin (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXZ0_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 2.150e-7 Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = 1
Query: 199 HTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGNDPTEQPIWVKDVGSKLKTCVNGNE--TGEAHEEISLKD----------------------GDEVKVGTTNSIMSRVRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANTSSVTEKLVLALLGLRPVVHVGWLKD 675
+ +GRK ++ D+S+SR+HAE+ V T+ +++KD+ SK T +N E + SL + G ++KVGTT+ ++ V L CA+ ++ + KA KA ++ G A +++W THLVT T K + AL L PVV+ WL D
Sbjct: 33 YLIGRKEGAIVLANDKSISRRHAELSV--------TDGRLFIKDLDSKFGTFINTQRLWNTEPTDAASLAESQPLLAEEPYGHPGGRRYAVPHGAKLKVGTTSFLVEHV---PLVVCASGVSGDAKATHKAACERLGAAQAKEWRE-DVTHLVTPM--MQWTPKFLYALGSLVPVVNPLWLHD 201
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Viridiplantae |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 88.6 |
| Seed ortholog evalue | 1.6e-14 |
| Seed eggNOG ortholog | 88036.EFJ19311 |
| Preferred name | NBS1 |
| Model size | 2618 |
| KEGG ko | ko:K10867 |
| KEGG Pathway | ko03440,ko04218,map03440,map04218 |
| KEGG Module | M00291,M00295 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000075,GO:0000077,GO:0000228,GO:0000278,GO:0000280,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000784,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007093,GO:0007095,GO:0007127,GO:0007131,GO:0007154,GO:0007165,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010389,GO:0010564,GO:0010948,GO:0010972,GO:0016043,GO:0016233,GO:0016234,GO:0022402,GO:0022414,GO:0023052,GO:0030870,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0032200,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0035556,GO:0035825,GO:0042127,GO:0042405,GO:0042592,GO:0042770,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045786,GO:0045930,GO:0046483,GO:0047485,GO:0048145,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060249,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098687,GO:0104004,GO:0140013,GO:1901360,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047 |
| Exons | 13 |
| EggNOG free text desc. | Nijmegen breakage syndrome 1 |
| EggNOG OGs | 2CMFP@1,2QQ7Y@2759,37HEM@33090,3G9QC@35493 |
| Ec32 ortholog description | SMAD/FHA domain |
| Ec32 ortholog | Ec-01_009620.1 |
| Cds size | 2616 |
| COG Functional cat. | L |
| Best tax level | Streptophyta |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03032,ko03400 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462770.0714734-CDS-Ecto-sp13_S_contig1443:4271..4445 | 1681462770.0714734-CDS-Ecto-sp13_S_contig1443:4271..4445 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 4272..4445 - |
| 1681462770.0858955-CDS-Ecto-sp13_S_contig1443:5177..5295 | 1681462770.0858955-CDS-Ecto-sp13_S_contig1443:5177..5295 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 5178..5295 - |
| 1681462770.096714-CDS-Ecto-sp13_S_contig1443:5762..6162 | 1681462770.096714-CDS-Ecto-sp13_S_contig1443:5762..6162 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 5763..6162 - |
| 1681462770.1059425-CDS-Ecto-sp13_S_contig1443:6871..7583 | 1681462770.1059425-CDS-Ecto-sp13_S_contig1443:6871..7583 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 6872..7583 - |
| 1681462770.1143696-CDS-Ecto-sp13_S_contig1443:7865..8006 | 1681462770.1143696-CDS-Ecto-sp13_S_contig1443:7865..8006 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 7866..8006 - |
| 1681462770.1233485-CDS-Ecto-sp13_S_contig1443:8675..8777 | 1681462770.1233485-CDS-Ecto-sp13_S_contig1443:8675..8777 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 8676..8777 - |
| 1681462770.133732-CDS-Ecto-sp13_S_contig1443:9417..9499 | 1681462770.133732-CDS-Ecto-sp13_S_contig1443:9417..9499 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 9418..9499 - |
| 1681462770.1432877-CDS-Ecto-sp13_S_contig1443:10006..10096 | 1681462770.1432877-CDS-Ecto-sp13_S_contig1443:10006..10096 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 10007..10096 - |
| 1681462770.1519446-CDS-Ecto-sp13_S_contig1443:10779..11130 | 1681462770.1519446-CDS-Ecto-sp13_S_contig1443:10779..11130 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 10780..11130 - |
| 1681462770.1612163-CDS-Ecto-sp13_S_contig1443:11382..11501 | 1681462770.1612163-CDS-Ecto-sp13_S_contig1443:11382..11501 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 11383..11501 - |
| 1681462770.1755853-CDS-Ecto-sp13_S_contig1443:13643..13725 | 1681462770.1755853-CDS-Ecto-sp13_S_contig1443:13643..13725 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 13644..13725 - |
| 1681462770.1878405-CDS-Ecto-sp13_S_contig1443:14602..14684 | 1681462770.1878405-CDS-Ecto-sp13_S_contig1443:14602..14684 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 14603..14684 - |
| 1681462770.19673-CDS-Ecto-sp13_S_contig1443:14980..15143 | 1681462770.19673-CDS-Ecto-sp13_S_contig1443:14980..15143 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1443 14981..15143 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1443.3405.1 >prot_Ecto-sp13_S_contig1443.3405.1 ID=prot_Ecto-sp13_S_contig1443.3405.1|Name=mRNA_Ecto-sp13_S_contig1443.3405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=872bp
RSGKHGGVHLRAPRICSAHLLRTSTLLCNTKQTRCCLYACWRMWLLDVLD
PKIGDVSTTVAMAEGIHTLGRKGSSVSFPEDRSVSRKHAEIRVGLVPGND
PTEQPIWVKDVGSKLKTCVNGNETGEAHEEISLKDGDEVKVGTTNSIMSR
VRFQALRFCATQLTAEEKAELKALSKKCGGAVSRKWDATKCTHLVTLANT
SSVTEKLVLALLGLRPVVHVGWLKDLAAGGTAKPLRPVPETAAFGPVVTR
SRRQGPFRVRHTADRRTHLSGDFFAILHKDELVETIVEAAGGALCRAYAM
SDDDFAGQDWQEWSAGRQSHFVPAGPEAPLSAKAKAVLASRGEVLEDVGM
EATDKTQLTEAVVYLQSLVNVREAMRASSSSVAPMAVNTSSEAWGPSQSL
ATSQLTKGLPARAAAATAAASAEPAMPPPTGGGSSNSRKMSKPAAAAAAV
SGAISSSKVPSSAVAVAAVAAESGSASERKKDVADGMSVDKDDDGAVAGG
SVGQTVKEPEEEMEGGPANDPVAKGKRSAARRTRGREREDEPGRDAAAAA
AAAEVKDGAWGAERRGGTAGAGGYAAGKKASFATAAVVADDDQIGDGADD
AGGVPVAGPTPGGDDDDDGGGGGGGRGSGGGGGRPAKRKRGAQPPRRGRG
EEDDAREAGAGDASVEDEDKQQDDDEEEEAEEEEEASLERKGRGSQQRSS
VPTPAPGGWMTAHNASSSQKDKRPGGGRVRKAGGVGGDTEGEVEEDEDGE
ERARLATPADPAVTEMCRQGLCFVPLVAKAVSRSAPMGYSRSSTARPVGG
RRGPAVPNFKRFKKNTIMFGGEQVAAYVPLAALRSTLPKESERELALAEE
QQQLEAEEARGPKRQGWPFETN back to topmRNA from alignment at Ecto-sp13_S_contig1443:4270..15143- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1443.3405.1 ID=mRNA_Ecto-sp13_S_contig1443.3405.1|Name=mRNA_Ecto-sp13_S_contig1443.3405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10874bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1443:4270..15143- (Ectocarpus species13 EcNAP12_S_4_19m)
CGGAGCGGGAAACATGGTGGTGTCCATCTTCGAGCCCCTCGCATTTGCTC
CGCACATTTGCTCCGCACATCCACACTGCTGTGCAACACCAAGCAAACGA
GGTGCTGCCTGTACGCTTGTTGGAGGATGTGGCTTCTCGATGTGCTGGAC
CCAAAAATTGGAGGTAAGTTGAACCGAGTTTTCTTCGAGATTGCTATGCG
CAGAACATCCGTGATCTTGCTCCCTCCACATGCCCCCTGTTCTGGGCATA
CGCAAATTTGCAAATTTGATTTCAAATCTCTAAAAGCATGTACTGCTGTA
CAGCTTCATTTCTGTGCATGCTGCCGTAGCCTACATGGAGTGCTGTAGGG
ACAAGAAGTGAAACGTTTGAACCGCGCACAGGTTGCCATTCTCTCTCTTT
CTCTCCTTGTCTCTCTTCGTGTTTCTCACCACAACTGACTGCGTTCCGGG
TTTCACCAGACGTGAGCACCACCGTCGCTATGGCGGAGGGAATCCATACC
CTCGGAAGAAAGGGCTCAAGTGTCTCCTTTCCTGAAGATAGGTAAGCCAC
TCACCAGCGGATTGCCGCTATGCAGGCGTATGGTAGAGGCGTGGTAGTTC
ATACGTAGTTTACAGCTGCCGTGTTCGGAGTCTATATGTCTAGCAGTCAT
GTTCTTCTTTCATAAGCGTCGACCACGCTAAATAATACAGGTAGTAGCCA
TCGGACCAAAGAAAGAAAACGCGGGACAAGGACACCCAGAAAGCTTTCCG
TTCCACCCACAGGGAGGCAGTGATCTCTCTTTCTACGCATTCTGCATACA
CTGATTCCCCGCTGTAGACAACAGCTGTAGACCAGCAGCTGACAAATGTT
TGAAAAGGGCGCCGTATCATCCATGCCACACGGAGAGCCAATCGCCGGGG
GGGTAATTTGTGATCCATGCTAAATACTGCTTTCCTTCGAAACGGGGATA
TCAACGAGCCAATGAATGATCATATCCATGCCATACCGCACGCACACCTG
CGCCCTCCACACGGCATCATCGACGGACAGCGGAGTGACACATGAAAGAT
CTCGGATATTCTATACTGCCGGAAATCACCTACCTGCCGGCCTGGGTGTG
CGTGCGACTGTCCATTAGGGATGGCCGTCTCCGTAACCGTATAGCACGAA
GCACGCGCACGATTGTTGCTTCCATGTCTCTCAAGCACCCCACACAAGCG
TGCCGCCTGATTCAGTGCGTCATCCCCGTAGAAAGGTGCACGTGTGTAGG
CATCTGCAACAGTAGCTTGGCGCATCATGCGTAATGTTGTGCTACCTCTC
CTATCCGCGCCTCTATAACCTCACCCCACACCAGGTTGACGTTTGCGTAG
GACCGGCCTTGCGTCCCTCGGCAATCATGATGATCTTCGATTCTTTCTTC
GGATCTTTGCTTGTGCAGGTCGGTCTCGCGGAAGCACGCGGAGATAAGGG
TAGGGCTCGTTCCGGGGAACGATCCGACTGAGCAGCCCATCTGGGTCAAG
GTACATACGCCGCGGTTCCCGTTTTCCTGAATGACTTGGTTGAGGAACAA
TCTCGTGGAAACCCAGTTCTGAACAACGAGACTATCTGCAACGACAGGGT
CCGAGAAGAATCAAACATTTTTCGATGATTGTACAATTGTACAGAACCGA
GAGTTGTAAGACGTAGGGTCGCTTGCCTTCAAAGCATTGTTTTCGCGATA
TCACGCCGAGGGAGCTTAAATCCGCCCCCGCCCCCGTGCTTACCCACCAC
GAAGACCCTGGAACAGCGGTATGACCTGTATATCGCACACGTCTTGCGGT
GATGCGCGTGGGGAACACGAACAGGCCCTAGGTGACCCTCTACATGACAG
TGGTGGTAGCAGTATTAATGGTTTGCCTCCGATCACCACTACCACCCTGC
ACCCTGTGTGCTTCGCTGGCGCGGTGGACTGCCTTTTAGTTTTGTAAGAA
TACACGTCGCCCGGGTCTTTATGTTCAGTTCTTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTTTG
TTCGGTGCCAATGACAAAATGTTACAGTTAGGGCCCGCAATTGAGATTTT
TTTTTTAAGAAATAAAGGCTCATTGTTCCACGAAAACAAAAGGAAATGAG
AATACAAGAAAACAGGGTTGAGGGGGGGCAGAAGACGAACTTTGATGTTG
ACTAGTTTTGAAACCAAACGCAAAAGCACCAGAAATTGCACAACAGACGC
ATCAGACCAGTAGGAAGGGACCGCGATAAACAGCAATCGTTGATTCTCTC
ACAGGGCGGCAGTAGAGGCTGCTCAAAACATACATTTCACGCGTCTACGT
CTACACGCCTCCTTTGAAATCAAGATAAAAATTTGCACAATTCTAAATTC
TAGTCAAAAGATCCAAAACAGAAGGCGCTCAAACAAGATCAGTTTTGAGG
GTTAGGTGTCGCATTCTATTGTCATCAGTAGAGGACATCACGAACATGCG
TCGTGCGTGCTGGCACGTTCAGGTTTGCTACTGGAGCTGAAATATCGAAG
GTCGCAGCACCTTCTGAGAACAGCCCGAAATCTGCGCCGAAACCAAGCGG
CATCCAACATTTGTCACAGCCCTGCTCGCCGCCACTGACCCCAATCTCCT
GAACTGCGGGTTTACAGCAGTAGCTGATGCCACTAGCTACTGCTGGCGAC
CCGTGGTTCAAGGGCTTGCGGTCCGTGGCGGTGAGCACGGCTGTGACAAA
TGTTGGATGCCGCTTGGTTTCGGCGCAGATTTCGGGCTGTTCTGAGAGGC
TGCTGCGACCTTCGATATTTCGGCTCTAGTAGCACACCTGAACGTGCCAG
CACGCACGACTCGTCTTCATGGTATCCTCTACTGATGACAATAGAATGCG
AAACCTAACCCTGGCGGGAAGGTTTTTTTTTTCTTTGTAAAGGATTAAAG
TATAGGAAAAAGAGCCAGCGTGACAACCCCTTTTCTGCCCCCCCTTAAAA
AACATGGCTCACGCTGGGACGCACAATAAGAAATGTCTCAATAAGAAACA
GCGGCGACCGCTGCCCTACTACATGAAACGAGGGGTTACGGGGAGAGTGT
GTCGAATAAGAAACACCCCACAGCTCCTGCTATCTTTCGCTCTTTCCCCC
CTCTCCCACTACCCCCCCCCCTCCCAAGTGCGTTATTAGTTATACGACGA
GGGGGGAGTGTGTTTTTTTTGCGACGCCCCCTTCGGCCCCCTGCCGGCTC
TGGCGCTCTCTGGCGCTCCGGCTCTGGCACAGCACACCAGACAGGCTGCG
AACCACGATATGCTGTCTGCTGTACGATTTTGATGGTGCTCTCCGCCAGC
TCTCGTGAGCAGAGAAAACAAGAAGTTGCCGATTGAATAAATTCAGTAGG
ATTTGGCGGCACGAAGATAAGAAACTTGACATGAGAAATTGAACGACACA
CGCTGAGTTTATAGCCTACAAAAGGAATTCGAGGCTGGACCTGGAATAAG
CGTTTCTTAATTGCGGGCGCTAACTGTAGTCTTGATCGTGGGGATCCGTC
CCAAAGTCGGGTTTGCGTTTTTTCCCTCCTTTGCATCAATGCATGCACGT
CGTGCGCGGTGATGCTCCGCGTTGTGTGCATACGCACCCCAGGACGTGGG
CTCGAAGCTGAAGACCTGCGTCAACGGGAACGAGACCGGCGAGGCCCACG
AGGAGATCTCCCTCAAGGACGGAGACGAAGTCAAGGTCGGCACCACCAAC
AGCATCATGAGGTGAAAGAAGCACACACACACACACCACGTTTGTTTTGT
GCCGGCGCTGCTAGTGGAAACTTGCAGCGCACGTGCGTGACGACCTTCGG
CGGAAGGGCCTGTCTGTGGCCCCATCAGGGATGTCACCGAAAGCCCTCCA
ACACCCGGGTCTCGTGTCTATTCCGATTAATTATCACCCTTTTCGAACTG
CTGTCCAGCAAAAAAACACATGCACGGATGCACCGCCCCTGCACGCGAAA
CGACGCAAACGAGCAGGGTCCGATTCCAGGCGCTCCGCTTCTGCGCCACG
CAGCTCACCGCCGAGGAGAAGGCGGAGCTGAAGGCCCTGTCCAAGAAGTG
CGGCGGCGCGGTGTCCCGGAAGTGGGACGCGACCAAGTGCACCCACCTCG
TCACCCTCGCCAACACGAGCAGCGTCACCGAGAAGCTCGTGCTCGCGCTC
CTGGGCCTCCGGCCCGTGGTCCATGTCGGCTGGCTCAAGGACCTCGCCGC
GGGGGGGACGGCGAAGCCGCTGAGGCCGGTGCCGGAGACGGCGGCGTTCG
GGCCGGTTGTGACGAGGTCGAGGCGGCAAGGGCCGTTCCGGGTTCGGCAC
ACAGCCGATCGAAGGTGTGTAGGTGTAGGGGGGGGGGGTTGGAGGTGCTC
GCGCGCCGCACTCACGGCTTTTGGGAGGATCGGACATTTATTTTTTATTC
TAGGTCGAACTTCCTGTTGTTGTTGTTGTTGTTTCCTTTATTTGATACCA
TCTGGAAGGTGTTGTGAGATTGATCAACTGGGCTCCTTTCTGTGCGGAGA
ATGGTGAGTATTTTCCTCCCTCCCTGTGTTGAGACTGGTTGCCATGATGG
TGTCTCCCCCCTACCTCGCTCTCGCGCAGGCGTTGAAGCAATAATGAAAC
CGATGAAGCAACCAAGAGATGGACACCAGGAAGAGACGATACATTCGATG
GCCCCAAGCGACAAAAACATTTTGATTCAGCTAACAACGCAGCCAAACGA
TTTCACTTCATCACATCTTGTAAAAGTTCGTTGATGGTGTCATGCGTGTC
ATGAAGAGCCCAAAACAACTTGGCAGTCCGTTTGAAGCGATCCAGCTGGT
ACATAGCCTTAATATCTCTTCGTTTCAACGGAGTAACGTGGGCAATGCTG
TCAAGACTATGCCGAGCTACAGTTGACGAATACCTACCTTTCCCATGGAG
ATACTAAACAAAGATGGCCTGGCTCCTCCCCCCACCGCTTGTCCCCGTCG
CCCCCTTCCTGCTTCGACTACGCTAATGTTACAATTGCACCCCGAAGGAC
CCATCTGTCGGGTGACTTTTTCGCGATTCTCCACAAGGACGAGCTCGTGG
AAACGATTGTGGAGGCCGCCGGGGGAGCACTCTGCAGGTGTAGAGAAAGC
AAAGAGCACACCATTTGCAGCGAGAAAGCTCGTGTAGGCTACTGTCTTAT
TCTTGGCGGCAGAACAGGCCTGGCTGAATCAGCTGTCGTAGTAGCAGGGT
CGTTGGTGTCGGCACACGTCATGAACGTGTCGCACACACATATATCCGGA
GGAGAGCATGCCGCGGGGCCCCCGAAGAATAGTGGTCGGGCACGTCACAG
CGAAAACAGTAGTAGTAGTAGTAGTAGCGCAGGGGGTTGTCACGTCCGTA
TCGAGTGTGTAGAAACGAGTTTGTGTTTTGATGTTGTGGTTTTATTTGTG
ATTTTTGTGTGTACGTCGCCGCAAGGCACCCCTCAACGAAACGAGGGAAT
AGAGAAGTTGCGTGTTTACGCGATTTAGTTTCTGGCGAAAATGAAAGCGA
AGATCAACGAGGTTTTGCCATCCCGGAGTCGGGCATGCTTCCAACAATCC
CCTCTTGTCCTCTCGGTCGGATGAACGTTGTTGGGTTGGTGCAGGGCGTA
CGCGATGAGCGATGACGACTTCGCCGGGCAGGACTGGCAGGAGTGGTCCG
CGGGGCGCCAGTCGCACTTCGTCCCGGTAAAGACTTAGATATTATTGTTA
GTTGAAGAGAGGCGCTGCAACGATAGTTGTTCAGAGAAGAGAATAGGGTG
TTGTTTTTGAAGTCTTTTGTCCCAAGAACGAGAGAAATCCGTCGGGTGCT
TGAGCGGCGCAATCGTGCTTGTTGCGATTTCTGCTCCTTGTTCTTCCCGC
ATGTTGTCGCCGACGCACCGCCTCCTCTATTTGGCATCTGTAGCACGCAA
CATGAGCCGGTTATCTACCCGTGGAGTTTTGTCCCCGACGGTCCGTACGG
AGCTTTGTTTGTCTCTTTTTTTCTTCCCTGTTCAATGTAGCCGTCGCGTC
CAGTATCGCAAGCGGAACAGAAGTAGTAGCACTGTCGTTGGGAAGTTCGC
ACATACCCCGCCCCCCCCCCCTACACGCACACATTTTTCACAAATTTTTT
TTTGATTGACCCTGCTGATGCCGTCTGAGATCGTTGTGAATATGTTCACA
TTCCGCGACACCACCGGTACGGTACGGTACGGTACGGCACGGTACGGCAC
GGTACGGCACGGTACGGCACGGTACGGTACTATTACCGACGGCGACGACA
ACAACAACGACACTGCCTTCCTTGCTTAGTCTTCCTTCGTTGTTTGTTTC
TCGTTGAACGAAAAAGGCCGGGCCGGAAGCTCCCCTCTCGGCGAAGGCTA
AGGCCGTCCTTGCCTCGAGAGGCGAGGTGCTAGAGGACGTCGGGATGGAG
GCTACTGACAAGACGCAGGTGAGTGTCTTGAAAAGGCGTCAAGCCTGGTC
TCTCGGCCGGACTGGTTTCAGCCGCCCTGTTTCGCAGGTTGTGGTCGTGG
CGTGTTGGGTGTGCATGCTGACGCAGCGTCTGATCAAACAGTGGTCGTGC
AATTGATGTGTGTACACGGGTTGGGTCTGAACCAGTTTTTTGTTTTGGTG
TAGTCGAGTTTCGCTGAGAGAGACTTCCAACATGGCTGTGTGCTGCTGTT
TGGACTATGTACAGGTTCGCTTGTTATTATTTGTATGAGCTTTTGTGTTA
CAGTGTTGACAACCACAGAGTGCCCGACCTCTTGCAGAACGTCCCGTTCC
TTTTTTGGAGTGATGCTGCCTATTTGGACTGGCTGGCCACCTGAACGCAT
TTTGACAGGGGAAGAGGGAGTACGAGGTTGGGACGAAGGGGCTTTGCTGG
TACTTGTAAGGTAGTTGACGCGGAGACTCACTCGTTGTTGAGAATAGATA
GATAGATAGATATCCCACTTCCTCTGCAGGTAGGGGTTAGGACGCTCGCC
TTTTGCCTTGCATGGCCTTGGGTACGATTATTTCGGTGATGCGTGACGTC
ATACGTGCCCATATCATCCCTCTCTCCGCGCGTGAACCTCTGCCTCCCGT
CTCTCTCTCTCCCCCGGTACGACCGCCCGATACAAAGCTGACGGAGGCTG
TCGTGTACCTCCAGTCTTTGGTCAACGTCAGAGAGGCGATGCGGGCAAGC
AGCAGCTCTGTAGCGCCGATGGCCGTGAACACCTCCAGCGAGGCTTGGGG
GCCGTCGCAGAGCCTGGCCACTTCCCAGGTGAAGATCGCTGGTTGCGACT
GTCGCAGCAGTAGAGTCCTCTGCTAGGTCCGCCCACTGAAGGAATGCCCA
TCTAAGTACCTCATATTTTTCGCCCCATCTCGTTCAACATTTTATTGTAG
AGCCTTGTTGAGGTTTGGCCCCTGCCAACGTCAATCATGAACGGTCAAAT
AGTTCATGCAAGAGAGCACCCCCCCACACACACACCTCCCGTCCGCACGC
CCCCGGTCTGGCCTGCGCTGTTTGACGATCCTGGCTGTGTGGGTGTGTGT
CTGTTTGCAGCTTACGAAAGGGCTGCCGGCAAGGGCTGCTGCCGCGACGG
CGGCGGCCTCTGCTGAACCTGCCATGCCCCCACCTACCGGTGGCGGCAGC
AGCAACAGCCGGAAGATGTCCAAGCCTGCCGCTGCTGCTGCTGCTGTTTC
CGGCGCGATTTCTTCGTCGAAGGTGCCTTCTTCAGCGGTAGCGGTAGCAG
CAGTGGCGGCAGAGAGTGGCAGCGCGTCTGAGAGAAAGAAAGATGTTGCC
GACGGGATGAGCGTCGATAAGGATGATGATGGCGCCGTCGCCGGCGGTAG
CGTTGGTCAAACGGTGAAAGAACCAGAGGAAGAAATGGAAGGAGGGCCCG
CGAACGATCCCGTCGCGAAGGGTAAGCGGTCAGCGGCGAGAAGGACCCGA
GGCCGCGAGCGGGAAGACGAGCCTGGTCGCGATGCTGCTGCTGCTGCTGC
TGCTGCTGAAGTAAAGGACGGGGCGTGGGGGGCCGAACGACGAGGAGGAA
CAGCGGGAGCGGGTGGGTATGCCGCTGGCAAGAAAGCCTCGTTTGCCACC
GCCGCCGTCGTCGCTGATGACGATCAAATCGGGGACGGTGCCGATGACGC
CGGCGGGGTGCCGGTGGCAGGGCCAACACCGGGGGGTGATGATGATGATG
ATGGTGGTGGTGGTGGTGGTGGGCGCGGGAGTGGCGGCGGCGGGGGGCGA
CCGGCCAAGCGGAAGAGAGGCGGTGAGTTCGTTTCCTCCTGCACCCCCGG
ATTCGGGGCCTAGGGGGCAGAGACGGGGTTGCCTCTAGCAGGGCCAGGGT
TGTCGAAGATTTGATGGGAAACGTGCGTGGGTGCTGTTGTAGATGACCCT
TGTTCTGAGTGAGGGGGCATCGTAGAATGAACGCGGGATTCGAGCCGCCT
TGGAAGCAAAGCGTTTGGGCTGCCGACTTTGAACGGATGCAGATCGGTGC
CCGAAAAGCATTTGGCTGCTGCGTCCGGCCCCACCCCGGGGCCCTCTTTT
TTGAGCTCAGGCCGTGTTGCGTCACTGCTGCCGCATGTACTCACGGCAAA
CGGTGGCGGTAGTGGCCTGTGCCAATCCTTCCGTGAGATTTGTGCTGATG
GTATATGCTTTGCGTCTGCGCTGCTCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCTGTTT
TTCTTGTCTCTTTTTCCCCCCACCGCACACACCCCCCCGCGGGGGGGGNN
NNNNNNNNAAGGGGGGCGGTAGGGCCCGGTGCCATCCCTTCCGTGGGTTT
TGTGCTGATGGTTTTTTCTTTGGGTTGGCCCTGCTCCCCCCCCCCCCCCC
TCCCACCCACCCCGCCCCTGACCCCATTCGCTGTGCTGCTCATCTCGTCG
TCGTTGATCTCGACGTTTACCACGCGTACAGCGCAACCGCCGAGGCGTGG
CCGGGGTGAAGAGGACGACGCAAGAGAGGCCGGCGCCGGCGATGCGAGCG
TAGAGGACGAAGACAAGCAGCAAGACGACGACGAGGAGGAGGAGGCGGAG
GAGGAGGAGGAGGCATCGTTGGAGAGGAAGGGAAGGGGATCACAGCAGCG
CAGCAGCGTCCCCACCCCGGCCCCCGGCGGCTGGATGACCGCACACAACG
CCTCCTCTTCCCAGAAGGACAAGCGCCCCGGAGGGGGAAGGGTGCGCAAG
GCCGGCGGTGTTGGTGGAGATACGGAGGGGGAGGTGGAGGAGGATGAGGA
CGGCGAGGAAAGGGCACGGCTGGCAACGCCAGCGGACCCGGCCGTTACCG
AGATGTGCAGGCAAGGTTTATGTTTTGTGCCGTGGTGTGTCGAAGTTGCT
GTTGTGGTTGTTGTTGTTAGACACGGTGTCGACGCTGTCGTTGTTGCACC
GAATGCTAAGTTCGGGCCAGGATCGAAACGACGCCCACGTTGTTCGGTGT
GTAACCTGCTTGTTTGGCGCCAAAATGCGTCTAGTACTTTTTATGCATAT
AGCTTTTTTGTCTCCGGACAAAGCGTGGTCGACCCTTGTTATTAGAGTGA
CCCAACCGTTTAGCTCGGGTTACCCCAACAGCCAGTGAAATACGTACCCT
TAACCCTTCTTCCCCAGCACGAAATTATGTGCTGCTGAACTGCAGAATAA
GGCGATTGGCTGCCCCACGAACAATCCCCCCCCCCCTAATTCACACACAC
ACGCACCTCCCACCCGCACCCATCGTAGTTTCCCACCTTTGCTCTTCTCC
TTTGTTTTGGATGCTCGGTTCTCTCGTGGTTCGTGGCACGTCTTGTAGGC
TCGTGGCCAAAGCGGTTTCGCGTTCGGCGCCGATGGGCTACTCTCGGTCA
TCAACCGCGCGTCCCGTTGGCGGCAGGAGGGGGCCGGCGGTGCCGAACTT
CAAGCGTTTCAAGAAGGTATTTATTTGCTCTTTGAATATGCACAGCAGTG
TGTATTGTTTTGTCCGAGGTGGTTTGTTCGTGCGCCTCCTGCCATCCTTC
GACCATGCATCACCATCTGTCTTGGAATGGACACACCGCGGTTCGGACAA
GCGTGTGACGCTTTGTTGTGCACGCTTCCGGTCGTAGTGATAGTACATAA
CACGGCAAGCATAAGGTTAACAACCTATATCTCTGTTTGCGGGACGCGGG
GTTTCTTGGGGCAATCGTGGGCATCGCCGTTTTCCTCTGTTCCCTCTGCG
TCGTGGAAGTTCTGTGCCGCCGCTGCTGCTGAGCTCGAAACATCACACGG
AACACCCGCCACCTTACTACCCCCTTGTCTCGCCTCCACCCGTACACGCT
CCTCTGCATCACTGCCCCGATTTGCCCCCCGCCCGGCCCCAACATCGTCA
TCTCCCTCGCCGAGTGAAGTCAACGACACTGATCACCCCTCTTTCCGTTC
GTGAAGCTATCCCGCCGATCTTTTGTATCGGCCATCTCCGGTGCTCGCTT
TTTTTACCTGGTTCCTTGCACGGACGGTGTTGCCTCTGTTCACTCGAGAG
CCCCTTCCTGGGGTCAAACAGAAAAAATCCCCTGTGGCACCAGCATTTTG
AAACCTGCTCGCTTACCGGACTTTCTTCATTCTGCCTGTCTTCCTTTTTT
TTTTTTTTGCGTTCGTTGCGTCTTTTTTGTCGGCCGCGAGGGAATCAGAA
CACCATCATGTTCGGCGGGGAGCAGGTGGCCGCCTACGTCCCACTGGCTG
CGTTGAGGTCTACCCTGCCCAAGGAGTCCGAGCGTGAGCTGGCGCTGGCC
GAGGAGCAGCAGCAGCTGGAGGCGGAGGAGGCAAGAGGACCAAAAAGACA
AGGATGGCCTTTCGAAACCAACAC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1443:4270..15143- >mRNA_Ecto-sp13_S_contig1443.3405.1 ID=mRNA_Ecto-sp13_S_contig1443.3405.1|Name=mRNA_Ecto-sp13_S_contig1443.3405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1443:4270..15143- (Ectocarpus species13 EcNAP12_S_4_19m)
CGGAGCGGGAAACATGGTGGTGTCCATCTTCGAGCCCCTCGCATTTGCTC
CGCACATTTGCTCCGCACATCCACACTGCTGTGCAACACCAAGCAAACGA
GGTGCTGCCTGTACGCTTGTTGGAGGATGTGGCTTCTCGATGTGCTGGAC
CCAAAAATTGGAGACGTGAGCACCACCGTCGCTATGGCGGAGGGAATCCA
TACCCTCGGAAGAAAGGGCTCAAGTGTCTCCTTTCCTGAAGATAGGTCGG
TCTCGCGGAAGCACGCGGAGATAAGGGTAGGGCTCGTTCCGGGGAACGAT
CCGACTGAGCAGCCCATCTGGGTCAAGGACGTGGGCTCGAAGCTGAAGAC
CTGCGTCAACGGGAACGAGACCGGCGAGGCCCACGAGGAGATCTCCCTCA
AGGACGGAGACGAAGTCAAGGTCGGCACCACCAACAGCATCATGAGCAGG
GTCCGATTCCAGGCGCTCCGCTTCTGCGCCACGCAGCTCACCGCCGAGGA
GAAGGCGGAGCTGAAGGCCCTGTCCAAGAAGTGCGGCGGCGCGGTGTCCC
GGAAGTGGGACGCGACCAAGTGCACCCACCTCGTCACCCTCGCCAACACG
AGCAGCGTCACCGAGAAGCTCGTGCTCGCGCTCCTGGGCCTCCGGCCCGT
GGTCCATGTCGGCTGGCTCAAGGACCTCGCCGCGGGGGGGACGGCGAAGC
CGCTGAGGCCGGTGCCGGAGACGGCGGCGTTCGGGCCGGTTGTGACGAGG
TCGAGGCGGCAAGGGCCGTTCCGGGTTCGGCACACAGCCGATCGAAGGAC
CCATCTGTCGGGTGACTTTTTCGCGATTCTCCACAAGGACGAGCTCGTGG
AAACGATTGTGGAGGCCGCCGGGGGAGCACTCTGCAGGGCGTACGCGATG
AGCGATGACGACTTCGCCGGGCAGGACTGGCAGGAGTGGTCCGCGGGGCG
CCAGTCGCACTTCGTCCCGGCCGGGCCGGAAGCTCCCCTCTCGGCGAAGG
CTAAGGCCGTCCTTGCCTCGAGAGGCGAGGTGCTAGAGGACGTCGGGATG
GAGGCTACTGACAAGACGCAGCTGACGGAGGCTGTCGTGTACCTCCAGTC
TTTGGTCAACGTCAGAGAGGCGATGCGGGCAAGCAGCAGCTCTGTAGCGC
CGATGGCCGTGAACACCTCCAGCGAGGCTTGGGGGCCGTCGCAGAGCCTG
GCCACTTCCCAGCTTACGAAAGGGCTGCCGGCAAGGGCTGCTGCCGCGAC
GGCGGCGGCCTCTGCTGAACCTGCCATGCCCCCACCTACCGGTGGCGGCA
GCAGCAACAGCCGGAAGATGTCCAAGCCTGCCGCTGCTGCTGCTGCTGTT
TCCGGCGCGATTTCTTCGTCGAAGGTGCCTTCTTCAGCGGTAGCGGTAGC
AGCAGTGGCGGCAGAGAGTGGCAGCGCGTCTGAGAGAAAGAAAGATGTTG
CCGACGGGATGAGCGTCGATAAGGATGATGATGGCGCCGTCGCCGGCGGT
AGCGTTGGTCAAACGGTGAAAGAACCAGAGGAAGAAATGGAAGGAGGGCC
CGCGAACGATCCCGTCGCGAAGGGTAAGCGGTCAGCGGCGAGAAGGACCC
GAGGCCGCGAGCGGGAAGACGAGCCTGGTCGCGATGCTGCTGCTGCTGCT
GCTGCTGCTGAAGTAAAGGACGGGGCGTGGGGGGCCGAACGACGAGGAGG
AACAGCGGGAGCGGGTGGGTATGCCGCTGGCAAGAAAGCCTCGTTTGCCA
CCGCCGCCGTCGTCGCTGATGACGATCAAATCGGGGACGGTGCCGATGAC
GCCGGCGGGGTGCCGGTGGCAGGGCCAACACCGGGGGGTGATGATGATGA
TGATGGTGGTGGTGGTGGTGGTGGGCGCGGGAGTGGCGGCGGCGGGGGGC
GACCGGCCAAGCGGAAGAGAGGCGCGCAACCGCCGAGGCGTGGCCGGGGT
GAAGAGGACGACGCAAGAGAGGCCGGCGCCGGCGATGCGAGCGTAGAGGA
CGAAGACAAGCAGCAAGACGACGACGAGGAGGAGGAGGCGGAGGAGGAGG
AGGAGGCATCGTTGGAGAGGAAGGGAAGGGGATCACAGCAGCGCAGCAGC
GTCCCCACCCCGGCCCCCGGCGGCTGGATGACCGCACACAACGCCTCCTC
TTCCCAGAAGGACAAGCGCCCCGGAGGGGGAAGGGTGCGCAAGGCCGGCG
GTGTTGGTGGAGATACGGAGGGGGAGGTGGAGGAGGATGAGGACGGCGAG
GAAAGGGCACGGCTGGCAACGCCAGCGGACCCGGCCGTTACCGAGATGTG
CAGGCAAGGTTTATGTTTTGTGCCGCTCGTGGCCAAAGCGGTTTCGCGTT
CGGCGCCGATGGGCTACTCTCGGTCATCAACCGCGCGTCCCGTTGGCGGC
AGGAGGGGGCCGGCGGTGCCGAACTTCAAGCGTTTCAAGAAGAACACCAT
CATGTTCGGCGGGGAGCAGGTGGCCGCCTACGTCCCACTGGCTGCGTTGA
GGTCTACCCTGCCCAAGGAGTCCGAGCGTGAGCTGGCGCTGGCCGAGGAG
CAGCAGCAGCTGGAGGCGGAGGAGGCAAGAGGACCAAAAAGACAAGGATG
GCCTTTCGAAACCAAC back to top
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