prot_Ecto-sp13_S_contig1442.3398.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1442.3398.1
Unique Name	prot_Ecto-sp13_S_contig1442.3398.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1006

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1442.3398.1 vs. uniprot
Match: A0A6H5KUR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR1_9PHAE)

HSP 1 Score: 719 bits (1855), Expect = 4.020e-248
Identity = 422/507 (83.23%), Postives = 437/507 (86.19%), Query Frame = 0

Query:   67 RTNSDNASKLQELKLAFGLLSKEIQGLDGEEGDQCLPCPPTTESSAAVTEGKMRRNETPKPLAPAVKNMHIAPSAVATQEAPQQSHGGLAAAANFPAKKAATSHPGVQQRSHETADGLKRMRGDQRNKXXXXXXXXXRASSHAEGRKAAEATAKQAKQSLKQLDLELEKERRARTAAESALHQLQLRATESDLEREKLERVLASFGGRSLEEITAASQLLERRLREAETALVDSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQQLRCCLRGXXXXXXXXXXXXXXXXXSEARRESLAQRLEVLRTANKRLDKRVAAVALQSSVGTRARSNAGGGGGATDDSVARLAAARVRLKVLSTSGTAVSSINTGKGRGQSHAGEERAAVERAVGTVVAEKQWRHKLRNAEMQGEVFQAAAKASATGMKIALRQKAELEEMNRVLVKQLAGDMPAEEREQVGRMIDDEDVTRSPAPLVVGTDGESTHEDLGKDKTTAIL 573
            RT S+NASKLQELKLAFGLLS+EIQGLDGEEGDQCLPC P TESSAAV EG +RRNE PKPLAP V + HI PSAVAT+EAPQQSH GLAA AN PAKKAATSHPGVQ+R +E AD L RM  DQRNK         RASSHAEG KAAEA AKQAKQSLKQLDLELEKERRAR AAESALHQLQLRATESD    KLERVLASFGGRSLEEIT ASQLLE RLREAETALVDSQQLTA KAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQ+LRCCLRG                 SEA+RESLAQRLEVLRTANKRLDKRVAAV LQSSVGTRAR NAGGGG ATDDSVARLAAAR RLKVLSTSG AVSSI T KGRGQ HAGEERAAVERAVGTVVAEKQWR KLRNAEMQG+VFQ+AAKASATGMK+ALRQKAELEEMNRVLVKQLA DMPAEERE VGRM+DDEDV RSPAPL VGTDGEST+E LGKD+TTA L
Sbjct:    8 RTKSENASKLQELKLAFGLLSREIQGLDGEEGDQCLPCSPATESSAAVAEGDIRRNEAPKPLAPTVNSTHIPPSAVATEEAPQQSHSGLAAEANLPAKKAATSHPGVQERRNEAADDLNRMEADQRNKAAADGFDRVRASSHAEGSKAAEAAAKQAKQSLKQLDLELEKERRARIAAESALHQLQLRATESDXXXXKLERVLASFGGRSLEEITTASQLLEHRLREAETALVDSQQLTAVKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQTRTATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVTLQSSVGTRARCNAGGGGDATDDSVARLAAARARLKVLSTSGAAVSSITTEKGRGQWHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGKVFQSAAKASATGMKMALRQKAELEEMNRVLVKQLADDMPAEERELVGRMVDDEDVIRSPAPLDVGTDGESTYEYLGKDETTATL 514

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BLAST of mRNA_Ecto-sp13_S_contig1442.3398.1 vs. uniprot
Match: D7FPG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG8_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 3.440e-178
Identity = 346/448 (77.23%), Postives = 360/448 (80.36%), Query Frame = 0

Query:  119 MRRNETPKPLAPAVKNMHIAPSAVATQEAPQQSHGGLAAAANFPAKKAATSHPGVQQRSHETADGLKRMRGDQRNKXXXXXXXXXRASSHAEGRKAAEATAKQAKQSLKQLDLELEKERRARTAAESALHQLQLRATESDLEREKLERVLASFGGRSLEEITAASQLLERRLREAETALVDSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQQLRCCLRGXXXXXXXXXXXXXXXXXSEARRESLAQRLEVLRTANKRLDKRVAAVALQSSVGTRARSNAGGGGGATDDSVARLAAARVRLKVLSTSGTAVSSINTGKGRG-QSHAGEERAAVERAVGTVVAEKQWRHKLRNAEMQGEVFQAAAKASATGMKIALRQKAELEEMNRVLVKQLAGDMPAEEREQVGRMIDDEDVTRSPA-PLVVGTDGESTHEDL 564
            MRRNE  KPL PAVKN  I PSAVAT+EAPQQSHGGLAAAAN PAKKAATSHPGVQQRS+E AD L RM       XXXXXXXX RASSHAEGRKAAEA AKQAKQSLKQLDLEL+KERRARTAAES LHQLQLRATESDLEREKLERVLASFGGRSL+EIT ASQLLERRL+EAETALV+SQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQ+LRCCLRG                 SEA+RESLAQRLEVLRTANKRLDKRVAAVALQSSVG RARSN           VARLA                           QSHAGEERAAVERAVGTV AEKQWR KLRNAEMQGEVFQ+AAKASATGMKIAL+QKAELEEMNRVLVKQLAGDMPAEERE +GRM DDEDV RSPA PLVVGTD +   + +
Sbjct:    1 MRRNEASKPLTPAVKNTGIPPSAVATEEAPQQSHGGLAAAANLPAKKAATSHPGVQQRSNEAADDLNRMGAXXXXXXXXXXXXXVRASSHAEGRKAAEAAAKQAKQSLKQLDLELDKERRARTAAESTLHQLQLRATESDLEREKLERVLASFGGRSLQEITTASQLLERRLKEAETALVNSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQARAATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVALQSSVGARARSNXXXXXXXXXXXVARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXQSHAGEERAAVERAVGTVAAEKQWRDKLRNAEMQGEVFQSAAKASATGMKIALKQKAELEEMNRVLVKQLAGDMPAEERELIGRMADDEDVIRSPAAPLVVGTDADGALQSV 448

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1442.3398.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1442.3398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KUR1_9PHAE	4.020e-248	83.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPG8_ECTSI	3.440e-178	77.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..267
None	No IPR available	COILS	Coil	Coil	coord: 308..328
None	No IPR available	COILS	Coil	Coil	coord: 353..394
None	No IPR available	COILS	Coil	Coil	coord: 276..303
None	No IPR available	COILS	Coil	Coil	coord: 502..522

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1442	contig	Ecto-sp13_S_contig1442:9134..12783 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1442.3398.1	mRNA_Ecto-sp13_S_contig1442.3398.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1442 9134..12783 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1442.3398.1 ID=prot_Ecto-sp13_S_contig1442.3398.1|Name=mRNA_Ecto-sp13_S_contig1442.3398.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1006bp
MSSRCGQPVVPSSTQIGSFHLEASAAPQQQWRPKQRKIPCPNRPSLSRKA
TTTTATAGSGEALNRRRTNSDNASKLQELKLAFGLLSKEIQGLDGEEGDQ
CLPCPPTTESSAAVTEGKMRRNETPKPLAPAVKNMHIAPSAVATQEAPQQ
SHGGLAAAANFPAKKAATSHPGVQQRSHETADGLKRMRGDQRNKAVADGL
DRVRASSHAEGRKAAEATAKQAKQSLKQLDLELEKERRARTAAESALHQL
QLRATESDLEREKLERVLASFGGRSLEEITAASQLLERRLREAETALVDS
QQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQQLRCCL
RGRANAEQQARAATAALKKSEARRESLAQRLEVLRTANKRLDKRVAAVAL
QSSVGTRARSNAGGGGGATDDSVARLAAARVRLKVLSTSGTAVSSINTGK
GRGQSHAGEERAAVERAVGTVVAEKQWRHKLRNAEMQGEVFQAAAKASAT
GMKIALRQKAELEEMNRVLVKQLAGDMPAEEREQVGRMIDDEDVTRSPAP
LVVGTDGESTHEDLGKDKTTAILVPRIVGSPIESERQHHASATQCSSAVS
HPAVDRSSGLPAGDGATGETATAATPTPLRPSDNNPEMERNDNTIPDHLV
VEDTTAIMQQPTEPCNRSRQERGQKITIPPSPSSWVVPQQLRPAAVRSYS
VDACRSGATRTTSPRRHDGCPSRPRSASASAKTTSPSPCTTTPTRVRCEP
QQQRHHHQQVDEMVVARNNDACCCSSSAAPFNQLLLESKKLRDEVLSAVR
NGPLDCEETRRKACSGGNGSGNSSGDVGVGVGVTGGGDAGGRSGGRGVGG
DGDDGYGGSQLEKVGGGTAVASVPIEVLLRLCDRGARKAWRKREVGVADR
AVGGEKPIAGGDAANQDLDREGMADESSDRQNFTESLVEGSKMTLDDVAT
HLTSPLPPGITRALAQQVQGAVARGDERTFLNIVGRCGSTAREGIAKLLD
IDFPE*