prot_Ecto-sp13_S_contig14417.3396.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14417.3396.1
Unique Name	prot_Ecto-sp13_S_contig14417.3396.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	899

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14417.3396.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 599 bits (1544), Expect = 2.950e-185
Identity = 788/968 (81.40%), Postives = 805/968 (83.16%), Query Frame = 0

Query:    1 EPPTPRIGASGXXXXXXXXXXXXXXXXXXXXVEARARTGSIGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHGFSGSTAAAAIRSAMTLLRNDSMASKDTAPNTTSSLGSRVFRTFSSVSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ADGLPSQGKRMMFGSRSDRNLQGTAPPVSKIAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPQPQQALHPATLRRS------------------------------------------------------------NAKARGQARAQAERXXXXXXXXXXXERALMEEQAFVEAYSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLETRVAEDRRRAALPAEQQRTGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TASSNDFLSASSKTSWETGARPSMNQSGTAVGRGAGAGTGFFAASPVGDIPPFRGELPRAVGSPEAASIPTLAAIEARSSASGDASATTGEIAAVASPPPPEENGEMAQLAGSRSVEPRAAATAAPSTVPAVAGSGAAPXXXXXXXATTKDVAGGGGALELPIRAKDGVVVAAAAA---AELPEEVATAAVLDAPPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGGGGRNGGDSGPVGGGFLVSASTEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPSRSRDTVRDDIAFKLAAAAEVTRSSRPGRSSSASQDAYEAVSLPPTLAEQ 897
            EPPTPRIG S XXXXXXXXXXXXXXXXXXXX EAR RTGSIGAA           XXXXXXXXXXXXXXXXXXX   AGHGFSGS AAAA+RS   LLRN+S  SKDTAPNTTSSLGSRV RTFSSVSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ADGLPSQGKRM+FG RSDRNLQGT  PV+KIAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       QALHPAT  R+                                                            + KARGQARAQAERXXXXXXXXXXXERALMEEQAFV+AYSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TASSND LSASSKTSWETGARP MNQSGTAVGRGAGAG GFFAASPVGDIPPFRGELP AVGSPEAASIPTLAAIEARSSASG+ASAT GEIAAVASPPPPEE+GEMAQLAGSRSVEP AAATAAPSTVPA+AGSG+AP       ATTKDVA GGGALE+ IRAKDGVV         +ELPEEVAT+AVLD PPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGG  RNGGDSGP+GGGF+VS STEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEV LPPSRSR+TVRDDIAFKLAAAAEVTR SRPG SSSASQDAYEAVSLPPTLAEQ
Sbjct:  800 EPPTPRIGGSXXXXXXXXXXXXXXXXXXXXXAEARPRTGSIGAASSAEMVLERTGXXXXXXXXXXXXXXXXXXXEE-AGHGFSGSMAAAALRS---LLRNESTGSKDTAPNTTSSLGSRVLRTFSSVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVGSADGLPSQGKRMIFGGRSDRNLQGTPLPVAKIAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------QALHPATSARAAQAQQAAAARLRNLEEEKAQVGVQQQGPVEERPRQPREADFAAAAGALDARGKKYSRRLADTKARGQARAQAERXXXXXXXXXXXERALMEEQAFVQAYSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASSNDVLSASSKTSWETGARPLMNQSGTAVGRGAGAGVGFFAASPVGDIPPFRGELPPAVGSPEAASIPTLAAIEARSSASGNASATAGEIAAVASPPPPEEDGEMAQLAGSRSVEPSAAATAAPSTVPAIAGSGSAPAAAVEDGATTKDVADGGGALEVSIRAKDGVVAXXXXXXXXSELPEEVATSAVLDFPPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGG--RNGGDSGPIGGGFMVS-STEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVSLPPSRSRETVRDDIAFKLAAAAEVTRPSRPGGSSSASQDAYEAVSLPPTLAEQ 1753

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BLAST of mRNA_Ecto-sp13_S_contig14417.3396.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 1.360e-167
Identity = 328/368 (89.13%), Postives = 333/368 (90.49%), Query Frame = 0

Query:  533 TASSNDFLSASSKTSWETGARPSMNQSGTAVGRGAGAGTGFFAASPVGDIPPFRGELPRAVGSPEAASIPTLAAIEARSSASGDASATTGEIAAVASPPPPEENGEMAQLAGSRSVEPRAAATAAPSTVPAVAGSGAAPXXXXXXXATTKDVAGGGGALELPIRAKDGVVVAAAAAAELPEEVATAAVLDAPPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGGGGRNG-GDSGPVGGGFLVSASTEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPSRSRDTVRDDIAFKLAAAAEVTRSSRPGRSSSASQDAYEAVSLPPTLAEQVK 899
            TA SND LSASSKTSWE G R S NQSGTAVGRGAGAG GFFAASPVGDIPPFRGELP AVGSPEAA IPTLAAIEARSSASGDASAT GEIAAVA PPPPEE+GEMAQLAGSRSVEP AAATAA S VP VAGSG   XXXXXXX  TKDVA GGGALE+ IRA+DGVV AAAAAAELPEEVATAAVLDAPPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGG       GDSGPVGG FLVS STEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPS+SRDTVRDDIAFKLAAAAEVTRSSRP  SSSASQDAYEAVSLPPTLAEQ +
Sbjct: 1096 TAFSNDLLSASSKTSWEAGPRQSRNQSGTAVGRGAGAGGGFFAASPVGDIPPFRGELPPAVGSPEAAPIPTLAAIEARSSASGDASATAGEIAAVAGPPPPEEDGEMAQLAGSRSVEPSAAATAAASMVPVVAGSGXXXXXXXXXXXXTKDVADGGGALEVSIRAEDGVV-AAAAAAELPEEVATAAVLDAPPPLTQAERDENILRAHLASWRFCFHEAAALLTPVLGAGYVETPNGTVGGXXXXXXXGDSGPVGGAFLVS-STEEVDLHSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPSKSRDTVRDDIAFKLAAAAEVTRSSRPDGSSSASQDAYEAVSLPPTLAEQFR 1461

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14417.3396.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14417.3396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KT18_9PHAE	2.950e-185	81.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FMA1_ECTSI	1.360e-167	89.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..305
None	No IPR available	COILS	Coil	Coil	coord: 420..524
None	No IPR available	COILS	Coil	Coil	coord: 358..381
None	No IPR available	COILS	Coil	Coil	coord: 317..337
None	No IPR available	PANTHER	PTHR43939	FAMILY NOT NAMED	coord: 268..526

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14417	contig	Ecto-sp13_S_contig14417:409..3903 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14417.3396.1	mRNA_Ecto-sp13_S_contig14417.3396.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14417 409..3903 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14417.3396.1 ID=prot_Ecto-sp13_S_contig14417.3396.1|Name=mRNA_Ecto-sp13_S_contig14417.3396.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=899bp
EPPTPRIGASGGGGAARERSHTEESQARPPPVEARARTGSIGAASSAEMV
LERAASGGGGGGGGGGSGGRGGGGAEEAGHGFSGSTAAAAIRSAMTLLRN
DSMASKDTAPNTTSSLGSRVFRTFSSVSSGGARGGGGGGGGGGEAGRTMQ
ATGQQQQQQHKGGSAAATVPSDNQRGGGAAAAAADGLPSQGKRMMFGSRS
DRNLQGTAPPVSKIAAAPAATAATAAAGPAVASSSARSAQQGSVQQPPQR
RATTPPPQPQPQQALHPATLRRSNAKARGQARAQAERAKAEKAEKEAQER
ALMEEQAFVEAYSASAAAEAEQQAVTLKLARAEAANAVAQADREAKARAA
AQSSQAVAAAAARAQERQRQELADAEAAEARKRALVLETRVAEDRRRAAL
PAEQQRTGVAVGTDTPATARVREEAEARRLRAELEAKRARERRDASEKQE
RERREREREEAKAAREREAQAEKERETQLESERKEQELRDLERDRQLKQL
QRQQQQQKEVNESWERERRRKEEQNKAKASPSTASSNDFLSASSKTSWET
GARPSMNQSGTAVGRGAGAGTGFFAASPVGDIPPFRGELPRAVGSPEAAS
IPTLAAIEARSSASGDASATTGEIAAVASPPPPEENGEMAQLAGSRSVEP
RAAATAAPSTVPAVAGSGAAPAAAVESGATTKDVAGGGGALELPIRAKDG
VVVAAAAAAELPEEVATAAVLDAPPPLTQAERDENILRAHLASWRFCFHE
AAALLTPVLGAGYVETPNGTVGGGGGRNGGDSGPVGGGFLVSASTEEVDL
HSELWAKLVQAEALMLQTMLSVSSGANKDTMAACEAVSEALEVCLPPSRS
RDTVRDDIAFKLAAAAEVTRSSRPGRSSSASQDAYEAVSLPPTLAEQVK