prot_Ecto-sp13_S_contig14412.3393.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14412.3393.1
Unique Nameprot_Ecto-sp13_S_contig14412.3393.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 6.850e-151
Identity = 242/263 (92.02%), Postives = 245/263 (93.16%), Query Frame = 0
Query:    1 MLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGTETGGSFSATVESAVETAKAGRSAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEMEEADP 263
            MLGAVALAGLGALYYGLHDHTLGGGGG           G FSATVESAVETAKAG SA STAVQAFLSSS+TKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGL +ENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGG TGLPWYGYVAGAA TAYLLKTVG+IAT AVEEMEEADP
Sbjct:  171 MLGAVALAGLGALYYGLHDHTLGGGGG-----------GPFSATVESAVETAKAGHSAPSTAVQAFLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEMEEADP 422          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 228 bits (581), Expect = 4.910e-72
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0
Query:   74 VEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGG-TLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEME 259
            ++  GP+G +YFG LYV+AEVL IPA+PLTA++G+LFG  GGT VV+ SATIAA ISF LGRT LR+ VE L  +N KF+A+D AI +EGFK+ILLLRLSPIFPFA+SNYLYG+TSV F EY+  ++LGF PGT+AYVYGG  LG +V  G   GLPWYGY  G    A  +K VGDIAT AV E+E
Sbjct:    2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIE 188          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: D8LGE5_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE5_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 6.540e-70
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0
Query:    1 MLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGTETGGSFSA---TVESAVETAKAGRSAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLR 139
            MLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGT+TGG FSA   +VESAVETAKAG SAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLR
Sbjct:  175 MLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGTDTGGPFSAYAASVESAVETAKAGHSAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLR 316          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.310e-69
Identity = 117/198 (59.09%), Postives = 147/198 (74.24%), Query Frame = 0
Query:   65 AFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEMEEAD 262
            A L + +  VE +GP G +YFG++Y +AE+L IPAIPLTA+AG+LFG   GTAVVL SA+IAAAISF +GRTLLR  VE + ++ PKF+ +DKAI +EGFK++LLLRLSPIFPFALSNYLYG TS+ F  Y  GT+LGF PGT+AYVY G +GK +T   +T  PWY Y  G    A  LK V D+ATG +E ++E D
Sbjct:  181 ASLEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLDEED 378          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA)

HSP 1 Score: 220 bits (561), Expect = 5.270e-69
Identity = 108/195 (55.38%), Postives = 146/195 (74.87%), Query Frame = 0
Query:   68 SSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEMEEAD 262
            + ++T+++++GP GV YFG +Y +AE+L IPAIPLTA+AG+LFG   GT +VL SA+IAA+ISF +GRTLLR  VEG+  E PK + LD+AI+ +GFK++LL+R++PIFPFALSNYLYGVTSV F  Y  GT+LGF PGT AYVY G +GK++T G     PWY Y  G A  +  LK  GDIA+  ++ +E+ +
Sbjct:    1 AETVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDIIDNIEDEE 195          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.960e-68
Identity = 115/196 (58.67%), Postives = 144/196 (73.47%), Query Frame = 0
Query:   67 LSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEMEEAD 262
            L   +  V  +GPLG VYFG+ Y +AE+L IPAIPLTA+AG+LFG   GT VVL SA+IAAAISF +GRTLLR  VEG+  + PKF  +DKAI KEGFK++ LLRLSP+FPFALSNYLYG +S++F  +  GTLLGF PGT+AYVY G +GK +T  GS   PWY YV G A  + L+K + D AT  V+E+++ D
Sbjct:   73 LERVVDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELDDED 268          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.750e-67
Identity = 112/196 (57.14%), Postives = 144/196 (73.47%), Query Frame = 0
Query:   64 QAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEME 259
            Q  L+ ++ ++E  G +G +YFG++Y +AE+L IPAIPLTA+AG+LFG   GTAVVL +A++AA++SF LGR  LR  VE + ++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  Y  GT+LGF PGTLAYVY G  GK +T       PWY Y  G A  A  +K + DIAT  +E+ME
Sbjct:   25 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 220          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: K0R4C6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4C6_THAOC)

HSP 1 Score: 221 bits (562), Expect = 3.690e-67
Identity = 110/182 (60.44%), Postives = 139/182 (76.37%), Query Frame = 0
Query:   81 GVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEMEEAD 262
             V+YFG+ YVLAE+L IPA PLTAA+G+LFGA  GTA  L SA IAA++SF +G+TLLR  VE + DENPKFR++D+AI KEGFK+++LLRLSP+FPFALSNYLYG +S+ F  Y  GT+LGF PGT AYVYGG +GK +T GG +  PWY Y  G A    L+K +GD+AT  ++ ME+ D
Sbjct:  165 AVLYFGIFYVLAEILAIPAFPLTAASGYLFGAFPGTATCLFSAAIAASVSFVIGKTLLRGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVGGDSAQPWYVYAGGMAVIVGLIKVIGDVATSVIDAMEDDD 346          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 9.430e-67
Identity = 119/196 (60.71%), Postives = 143/196 (72.96%), Query Frame = 0
Query:   65 AFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVT-DGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEME 259
            A L   +   E +GPLGV YFG+ Y +AE+L IPAIPLTA+AG+LFG   GTAVVL SA++AA +SF +GRT LR+ VEGL +ENP+F  LDKAI +EGFK++LLLRLSPIFPFALSNYLYG TS++F  +  GTLLGF PGT+AYVY G +GK +T D G    PWY Y  G A  A  LK V D AT  V E+E
Sbjct:  196 AALDRVVELTESMGPLGVAYFGVAYCIAEILAIPAIPLTASAGYLFGPVQGTAVVLLSASVAAGVSFWIGRTFLREYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIE 391          
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.090e-65
Identity = 112/196 (57.14%), Postives = 144/196 (73.47%), Query Frame = 0
Query:   64 QAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDIATGAVEEME 259
            Q  L+ ++ ++E  G +G +YFG++Y +AE+L IPAIPLTA+AG+LFG   GTAVVL +A++AA++SF LGR  LR  VE + ++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  Y  GT+LGF PGTLAYVY G  GK +T       PWY Y  G A  A  +K + DIAT  +E+ME
Sbjct:  163 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14412.3393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE6.850e-15192.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA4.910e-7263.64Snare associated Golgi protein-domain-containing p... [more]
D8LGE5_ECTSI6.540e-7095.07Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectoc... [more]
A0A7S4I716_9STRA1.310e-6959.09Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S0CCP1_9STRA5.270e-6955.38Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9WRQ5_9STRA1.960e-6858.67Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1FUG6_9STRA1.750e-6757.14Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0R4C6_THAOC3.690e-6760.44Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448YYH2_9STRA9.430e-6760.71Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1FUT1_9STRA1.090e-6557.14Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 97..215
e-value: 2.6E-24
score: 86.0
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 54..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..263
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 187..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..105
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
NoneNo IPR availableTMHMMTMhelixcoord: 227..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14412contigEcto-sp13_S_contig14412:1777..4423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14412.3393.1mRNA_Ecto-sp13_S_contig14412.3393.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14412 1777..4423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14412.3393.1 ID=prot_Ecto-sp13_S_contig14412.3393.1|Name=mRNA_Ecto-sp13_S_contig14412.3393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MLGAVALAGLGALYYGLHDHTLGGGGGANLAGLGTETGGSFSATVESAVE
TAKAGRSAASTAVQAFLSSSITKVEELGPLGVVYFGLLYVLAEVLIIPAI
PLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLFDENP
KFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTL
LGFFPGTLAYVYGGTLGKVVTDGGSTGLPWYGYVAGAAFTAYLLKTVGDI
ATGAVEEMEEADP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc