prot_Ecto-sp13_S_contig1439.3380.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1439.3380.1
Unique Nameprot_Ecto-sp13_S_contig1439.3380.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length478
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1439.3380.1 vs. uniprot
Match: D7G5H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H7_ECTSI)

HSP 1 Score: 796 bits (2055), Expect = 2.540e-282
Identity = 409/442 (92.53%), Postives = 416/442 (94.12%), Query Frame = 0 
Query:   37 MAEAPKELVSCSSVEVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGPRHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKRIENRLPTLTSSLSTTISPTLSSPPTLRRSAEQNMEGRAGNGPLTPGSRGSRDSGGSRDLSEDAAFQFGTQAVSRSPTVPRSPPRADSNRLIHRFLPSRFRDTGVDVSETDLPRRRETTTTVNPMMNVFKALAGAAVGGADMDSKTRGHPGFWPPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVKGLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRDTSKDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALLPRPFSSVDIGHFLTVMQVSVFCCLSCFS 478
            MAEAPKELVSCSSVEVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGP+HGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEK IENRLP LTSSLS TI           RSAE+NM+GRAGNGPLTPGSRGSRDSGGSRDLSEDAAFQFGTQAVSRSPTV RSPPRA SNR +H+FLPSRFRDT VDVSETDLPRRRETTTTVNPMMNVFKALAG A+GGADMDS+TRGHPGFWPPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVKGLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRDTSKDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALLPRPFSSVDIGHFLTVMQ      L CFS
Sbjct:    1 MAEAPKELVSCSSVEVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGPKHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKGIENRLPMLTSSLSKTIP----------RSAEKNMKGRAGNGPLTPGSRGSRDSGGSRDLSEDAAFQFGTQAVSRSPTVQRSPPRAASNRWMHQFLPSRFRDTDVDVSETDLPRRRETTTTVNPMMNVFKALAGVALGGADMDSRTRGHPGFWPPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVKGLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRDTSKDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALLPRPFSSVDIGHFLTVMQTKSIPALVCFS 432
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1439.3380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5H7_ECTSI2.540e-28292.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1439contigEcto-sp13_S_contig1439:6025..16930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1439.3380.1mRNA_Ecto-sp13_S_contig1439.3380.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1439 6025..16930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1439.3380.1 ID=prot_Ecto-sp13_S_contig1439.3380.1|Name=mRNA_Ecto-sp13_S_contig1439.3380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp
QNGERHKKVDSSASSVGFADGEGGRQTLNLAALDALMAEAPKELVSCSSV
EVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGPRHGIRAFQDASKGGR
RHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKRIE
NRLPTLTSSLSTTISPTLSSPPTLRRSAEQNMEGRAGNGPLTPGSRGSRD
SGGSRDLSEDAAFQFGTQAVSRSPTVPRSPPRADSNRLIHRFLPSRFRDT
GVDVSETDLPRRRETTTTVNPMMNVFKALAGAAVGGADMDSKTRGHPGFW
PPYIRVHTANVLVENGDAFVHHAFMSRDVDHPWWFSIKGIVMRNRHLDVK
GLFSHSYASEVYKSRTQVVTFIENYVEDENADDLESMIKTNKSLWGLSRD
TSKDLGRGRRLSMFAIEEVDASVNIDPIDPPAAFRRVVVGEEFTEADALL
PRPFSSVDIGHFLTVMQVSVFCCLSCFS
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