mRNA_Ecto-sp13_S_contig14387.3379.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14387.3379.1
Unique NamemRNA_Ecto-sp13_S_contig14387.3379.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: A0A6H5K730_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K730_9PHAE)

HSP 1 Score: 587 bits (1513), Expect = 1.040e-203
Identity = 291/313 (92.97%), Postives = 302/313 (96.49%), Query Frame = 1
Query:    1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDSDARVVNPALQTDPSYIYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNALGILEKAETEYTFT 939
            EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGD NHGKCS IF+GSQPSVGEDGAT QYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQ+FSD LLAAA IRL DSDARVVNPALQTDPS I+FRPVRVSGDPTGGER IVADLVDSDGQSISDTDGIWDP+STMETPGAS+AAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTN FVY+G SNASDEEERI+GEEL DFLSAT+ALN+LYNAEI+TEFPFNALGILEKAET+YTFT
Sbjct:   42 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDGNHGKCSAIFIGSQPSVGEDGATAQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQYFSDTLLAAAGIRLKDSDARVVNPALQTDPSEIFFRPVRVSGDPTGGERTIVADLVDSDGQSISDTDGIWDPSSTMETPGASMAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNTFVYNGGSNASDEEERISGEELRDFLSATKALNELYNAEIITEFPFNALGILEKAETKYTFT 354          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.320e-58
Identity = 124/309 (40.13%), Postives = 177/309 (57.28%), Query Frame = 1
Query:    1 EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDSDARVVNPA-LQTDPSY--IYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNALGILEK 915
            E+DV  V+ AYL +E +KGFW A+Q+V         DL+   D +HGKC+ ++VG  PS        Q +QL  YS KF VR+V+FD A+T     +  ++G+Q +F    + A  ++ T   A  + PA + TDPS   ++ RPV  + D      +I+A   D +G  I+    G+ +P S         A V + G DG EEMHVF ++AWF   SWAW H+I EW T+G+FQGERRF+LG +VDD FL T  ++YD  S    EE R++G +L+ F ++  A N  Y A + TE  FN LG+L+K
Sbjct:  619 EKDVGPVASAYLFNEFYKGFWTATQNVQAPPA-AVLDLVEALDADHGKCNVVYVGIVPSA------AQKQQLQDYSRKFNVRIVYFDAADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSADSIAPADMLTDPSQNNLFNRPVVTTVDTLPAGVSIMAQYADENGDVIAGVLAGVTNPESA--------AIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTAYGASVKTEHAFNGLGVLDK 911          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.050e-56
Identity = 124/316 (39.24%), Postives = 177/316 (56.01%), Query Frame = 1
Query:    4 QDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDSDA---RVVNPALQTDPSY--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
            QD     +AY+ S  +KG+W A Q  +  T +    L +      GKC+ ++VG   +        Q  QL  YS  F+VR+V+F+ AETAN   + +++GI Q FS+ L++A  I L    A   RVV   L T+P    I+ RPV V+   T   G   ++A+ VD  G ++          S++  P  S+AA+ +   DG EE+H+FF++AWF   SWAWAH+ +EW T+GVFQGERRF+L  MVDD FL T  F YDG++N    E R+T  ++  F S   +LN  Y + IVTE+PFN LGIL    + +
Sbjct:   52 QDNGDTPDAYVTSTFYKGYWGAKQVTLTGTSELTNSLTS------GKCNVVYVGIPVTE------AQKVQLQDYSRTFKVRIVYFNAAETANDPEVNSRLGISQDFSEPLISAPFIALATGGAAVARVVPSTLVTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILNVVNSAF 343          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.290e-54
Identity = 118/307 (38.44%), Postives = 173/307 (56.35%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTD---SDARVVNPALQTDPSY----IYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    +HV+ +  D    L++  D +   HGKC+ ++VG  PS      T Q   L AYSA+F+VRLV+F +A T   A  TTK+G+Q +F+  +   A ++L+D       +  P  +TDP+     ++  PV ++  P  G   ++A  VD D +           N+ M         +++ G DG EE+HVFF + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDGE N +   +R TGE+L + L   EALN  Y+ ++I+TEF FN  GI E
Sbjct:  101 YIMSLFFKGYWSPKTEEHVVKEGDDLTALLVDSSDTSEVPHGKCNAVYVGYAPS------TDQAAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGVQTYFAGDITTPAFVQLSDLGGEKVSITKPGFKTDPNLFTPALFSYPVIINTVPDDGIE-VLAQYVDGDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAE 391          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.260e-53
Identity = 121/312 (38.78%), Postives = 177/312 (56.73%), Query Frame = 1
Query:   13 STVSEAYLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLT---DSDARVVNPALQTDPSY----IYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            ST    Y++S  FKG+W+    + V+ DT D    L++  D   HGKC+ +++G  PS      T Q   L AYSA+++VRLV+  +A T   A  TTK+GIQ +F+  ++  A ++L+   D    +  P  QTDP+     ++  PV ++  P  G   ++A  VDS G+  +S   G  +          + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+LGA+VDD FL T  F YDG  N +   +R TG++L   LS  +ALN  Y+ +EI+TEF FN  GI E
Sbjct:  295 STNPGLYVMSLFFKGYWSPKTEEFVVSDTDDLTALLVDSTDATPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYLPSALTHTTAEFTTKLGIQTYFAGDIMTPAYVQLSALGDEKVSITQPGFQTDPNLFTPALFSYPVIINAVPEAGIE-VLAQYVDSAGEPYLSGAAGDQE----------NAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAE 589          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 4.580e-53
Identity = 118/306 (38.56%), Postives = 174/306 (56.86%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTD---SDARVVNPALQTDPSY----IYFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPN-STMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D   HG C+ +++G  PS      T Q   L AYSA+F+VRLV+F +A T   A  T K+GIQ +F+  +   A ++L+D   +   +  P  QTDP+     ++  PV ++  P  G   ++A  VDS G          DP  S       + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F Y+GE N +   +R TGE+L + LS  +ALN  Y+ ++I+TEF FN  GI E
Sbjct:  302 YIMSLFFKGYWSPKTEEYVVSETDDLTALLVDSTDATPHGLCNAVYIGYAPS------TSQVAALTAYSAQFKVRLVYFPSALTHTTAEFTAKLGIQTYFAGDITTPAFVQLSDLGSTKVSITQPGFQTDPNLFSPPLFSYPVIINAVPEEGVVEVLAQYVDSAG----------DPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 591          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 8.910e-53
Identity = 117/307 (38.11%), Postives = 176/307 (57.33%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN---HGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDSDAR---VVNPALQTDPSYI----YFRPVRVSGDPTGGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLY-NAEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D +   HGKC+ +++G  PS      T Q   L AYSA+++VRLV+F +A T    + TTK+GIQ +F+  ++  A ++L+D  A    +  P  +TDP+ +    +  PV V+  P  G   ++A  VDSD +           N+ M         +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDG  N +   +R TGE+L + LS  ++LN LY  ++I+TEF FN  GI E
Sbjct:  121 YIMSLFFKGYWSPKTEEYVVSETDDLSALLVDSTDTSGVPHGKCNAVYIGYAPS------TAQVAALTAYSAQYKVRLVYFPSALTHTTESFTTKLGIQTYFAGDIVTPAFVQLSDLGAEKVTITQPGFKTDPNVVTPALFSYPVIVNTVPEEGIE-VLAQYVDSDSEPYLSGAAGDQENAAM---------LSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAE 411          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.280e-52
Identity = 118/306 (38.56%), Postives = 178/306 (58.17%), Query Frame = 1
Query:   31 YLLSELFKGFWA--ASQHVIIDTGDGDFDLLNDGDEN-HGKCSTIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTD---SDARVVNPALQTDPSY----IYFRPVRVSGDPTGGERNIVADLVDSDGQS-ISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYN-AEIVTEFPFNALGILE 912
            Y++S  FKG+W+    ++V+ +T D    L++  D   HGKC+ ++VG  PS      T Q   L AYSA+F+VRLV+F +A T   A  TTK+GIQ +F+  ++  A ++L+D   +   +  P  +TDP+     ++  PV ++  P  G   ++A   DS G+  +S   G  +          + A +++ G DG EE+HVF  + WF   +W WAH+  EWAT+G+F GERRF+L A+VDD FL T  F YDG+ N +   +R TGE+L + LS  +ALN  Y+ ++I+TEF FN  GI E
Sbjct:  406 YIMSLFFKGYWSPRTEEYVVSETDDLTALLVDSSDTTPHGKCNAVYVGYAPS------TDQVAALTAYSAQFKVRLVYFPSALTHTTAEFTTKLGIQTYFAGDIVTPAFVQLSDLGSTKVSITQPGFKTDPNLFTPALFSYPVIMNEVPETGIE-VLAQYADSAGEPYLSGAAGDQE----------NAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAE 694          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 5.220e-39
Identity = 90/230 (39.13%), Postives = 132/230 (57.39%), Query Frame = 1
Query:  238 QVRLVFFDNAETANLATITTKIGIQQHFSDALLAAASIRLTDSDARVVNPA-LQTDPSY--IYFRPVRVSGDPTGGERNIVADLVDSDGQSISDT-DGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNALGILEK 915
            QVR+V+FD A+T     +  ++G+Q +F    + A  ++ T      + PA + TDP+   ++ RPV  + D      +I+A   D +G +I     G+ +P S         A V + G DG EEMHVF ++AWF   SWAW H+I EW T+G+FQGERRF+LG +VDD FL T  ++YD  S    EE R++G +L+ F ++  A N  Y A + TE  FN LG+L+K
Sbjct:  678 QVRIVYFDIADTILDTEVQARLGMQSNFDQPFVGAPRVKRTGGSTDSIAPADMLTDPTQNNLFNRPVVTTVDTLPAGVSILAQYADDNGDAIGGVLAGVTNPQSA--------AIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPPSFFGPEE-RLSGADLQKFQNSEAAFNTEYGASVKTEHAFNGLGVLDK 898          
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Match: D8LD68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD68_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 9.070e-38
Identity = 84/191 (43.98%), Postives = 117/191 (61.26%), Query Frame = 1
Query:  370 ARVVNPALQTDPSY--IYFRPVRVSGDPT--GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSEEMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGTNPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNALGILEKAETEY 930
            ARVV   L T+P    I+ RPV V+   T   G   ++A+ VD  G ++          S++  P  S+AA+ +  +DG EE+H+FF++AWF   SWAWAH+ +EW T+GVFQGERRF+L  MVDD FL T  F YDG++N    E R+T  ++  F S   +LN  Y + IVTE+PFN LGILE  ++ +
Sbjct:    8 ARVVPSTLTTNPREFNIFTRPVLVTNLATTGNGTATVMAEYVDDSGANVP---------SSLSFP--SVAAMAYASDDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEG-AEVRLTSSDMSAFASFESSLNSQYGSSIVTEWPFNGLGILEVVDSAF 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14387.3379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5K730_9PHAE1.040e-20392.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G056_ECTSI1.320e-5840.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K3S3_9PHAE2.050e-5639.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI7_ECTSI3.290e-5438.44WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLJ3_ECTSI1.260e-5338.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ4_9PHAE4.580e-5338.56WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLJ1_ECTSI8.910e-5338.11Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FLI8_ECTSI2.280e-5238.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G022_ECTSI5.220e-3939.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LD68_ECTSI9.070e-3843.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14387contigEcto-sp13_S_contig14387:3..3733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score595.5
Seed ortholog evalue1.4e-167
Seed eggNOG ortholog2880.D8LJM4
Model size939
Hectar predicted targeting categoryother localisation
Exons8
EggNOG OGs28IRF@1,2QR2R@2759
Cds size939
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14387.3379.1prot_Ecto-sp13_S_contig14387.3379.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14387 3..3733 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462768.114276-CDS-Ecto-sp13_S_contig14387:2..261681462768.114276-CDS-Ecto-sp13_S_contig14387:2..26Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 3..26 -
1681462768.1248288-CDS-Ecto-sp13_S_contig14387:314..4371681462768.1248288-CDS-Ecto-sp13_S_contig14387:314..437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 315..437 -
1681462768.1421988-CDS-Ecto-sp13_S_contig14387:1019..11151681462768.1421988-CDS-Ecto-sp13_S_contig14387:1019..1115Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 1020..1115 -
1681462768.1563406-CDS-Ecto-sp13_S_contig14387:1372..15921681462768.1563406-CDS-Ecto-sp13_S_contig14387:1372..1592Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 1373..1592 -
1681462768.167204-CDS-Ecto-sp13_S_contig14387:1938..20531681462768.167204-CDS-Ecto-sp13_S_contig14387:1938..2053Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 1939..2053 -
1681462768.1840453-CDS-Ecto-sp13_S_contig14387:2522..26431681462768.1840453-CDS-Ecto-sp13_S_contig14387:2522..2643Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 2523..2643 -
1681462768.1946878-CDS-Ecto-sp13_S_contig14387:3062..32271681462768.1946878-CDS-Ecto-sp13_S_contig14387:3062..3227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 3063..3227 -
1681462768.2043362-CDS-Ecto-sp13_S_contig14387:3658..37331681462768.2043362-CDS-Ecto-sp13_S_contig14387:3658..3733Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14387 3659..3733 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14387.3379.1

>prot_Ecto-sp13_S_contig14387.3379.1 ID=prot_Ecto-sp13_S_contig14387.3379.1|Name=mRNA_Ecto-sp13_S_contig14387.3379.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp
EQDVSTVSEAYLLSELFKGFWAASQHVIIDTGDGDFDLLNDGDENHGKCS
TIFVGSQPSVGEDGATGQYEQLLAYSAKFQVRLVFFDNAETANLATITTK
IGIQQHFSDALLAAASIRLTDSDARVVNPALQTDPSYIYFRPVRVSGDPT
GGERNIVADLVDSDGQSISDTDGIWDPNSTMETPGASIAAVTFKGEDGSE
EMHVFFAMAWFHMESWAWAHYIMEWATQGVFQGERRFWLGAMVDDHFLGT
NPFVYDGESNASDEEERITGEELEDFLSATEALNKLYNAEIVTEFPFNAL
GILEKAETEYTFT
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mRNA from alignment at Ecto-sp13_S_contig14387:3..3733-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14387.3379.1 ID=mRNA_Ecto-sp13_S_contig14387.3379.1|Name=mRNA_Ecto-sp13_S_contig14387.3379.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3731bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14387:3..3733- (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGACGTATCGACGGTCTCGGAAGCGTACCTTTTGAGCGAGCTCTT CAAGGGATTCTGGGCCGCATCTCAGGTATGTTTAGTACCTGAAGCCCTCA TCGCTCCCAATACATATATGGGATGCACCGCTGCCATTCAATACCGTAAA AACATTGCCGGTGTATATATCGTAGTTGCTCGAGCGGACCGCACATACAT TCATACGCAACTACATCTTTCCCACCCCCGTCTTCATAGAGTCTCGCTGT TGTTTCATGAAAAGCGTACAGATGTCGTTTGTGCCGCCACCCTGGCGTAG TACAATGTGCTCCATCGTCCTGTTTGATTTTCACTTTATTCGGCACACGA CCGCTGCTACAGTAGATAAATGCAGACGGCGGAGAGCCTTCGGGCGACAC GCAGTGTCGTTTTTTGTAGACCAGTCTACATGGTACTTTGACAACATGTC TAGACTATGGCATGATGCCCGTCACCGACCATGACAACGGATATGACCCT TCGCAGCACGTCATTATTGACACGGGAGACGGCGACTTCGATCTTCTCAA CGACGGCGATGAGAACCACGGCAAGTGCAGCACGATCTTTGTCGGGTCCC AGCCTTCGGTCGGGGAGGACGGTGCGACCGGGCAATATGAACAACTGTTG GCGTACTCGGCGAAGTTTCAGGTGGGGAGAGAAACACATGCTCCATGCCG TAGCATACCAGTCTGAAAGATGAACGGAAGTATTCAATAGTCCGACTCTT TTTCGAGATGTTCAACTCCACGTAAGGACATGTAGCAGTCAGAACCAACA ACCTAGTTGTGCTGGAATACACAGTTGTGCTGGCTGCGCTTGAAAGTCAC TCTTTTGGCTTTCTTCATGGTTAACCCAATACACAAAAACGTACTCGAGG CGACGGTCGCAGACAAAACGAGGACCACAACTTGACGGGTTTCGGTCAGC ATACTGCTTCGCTGCTGTACCACAACTTCATCCCCATTTTCAAAATCACG TTTCGCTCTGAAAGAGCTGGGTCCCCGTCCTCCCACCCCCTCTGACCACT TGCTTGCTTGAAAATCATGCAACGTTTGCGTGCCTTTAAGGTCCGTTTGG TGTTCTTTGACAACGCCGAGACGGCCAATTTGGCCACCATCACAACCAAG ATCGGGATCCAGCAACACTTCTCGGACGCTTTGCTCGCAGCGGCAAGCAT CAGGCTGACAGGTGGCTGTATTTGGTATTTTGATCGCTGTCTCTGCCCCC TTTCTCCTTCCGCTCTTGTGAATGTATCACTCAATTGCTCGATTATTTGG TGCCCTCTTGAGCTCTTTTGTGGTCACGTAGATTTTATTGCCCCCGAACG GCCACCATCTTCTCACCGTTCCGTTGTGGGTTCGAAGAGAGAGCATTTCA AGTTCGTGAAGAGAATAGTGTTGGAAAGGGTATGCCTGCCTGCGTTCAAG ATGTACCCTGGATTTTTCGGACGCGAATGATTTTCCTCTGTAACTCTCCT TTGATGGAGTGTTTAGTCTGTTCTTGAAGGAACTTTCGTATTGGTGGAAA ACGCAGGTCATCTTTCCTTCCAGTGGCAAGACCAGCTTGGATGCTGTAGA AAAAACGAACCTCCAAGTTTCATAGCTCACGTGGTCTGATTGCGCAACAT TTCCCGCGCGCGACACACACCCAACCACAGATTCGGATGCACGAGTGGTG AACCCAGCGCTTCAAACAGACCCATCATATATTTATTTCCGTCCCGTGAG GGTATCGGGGGACCCTACAGGCGGCGAGCGAAACATCGTCGCAGAGTGAG TTACCGATGAAATACATCCCCACAAATCATGTGGGCGCTGGAAATGCGCC TATCCCGGGTCTCATCCCTCAGTAACATCGCTTCCCCAAAATTCTAGTCG AGATGGATCATGCTCTACCATCATCTTTATCACATTTCCCGAACCGAGAC CTCGCCATGAGTAGACGACGTGAGCATAGAAACGATTGTGCCGCAGCTCC ATCAGGCTCCCCACACCAACTGGTTCTTCGTTTGTTATTGTTTTGTTCGC ACAAAGCGACTCCCATTTTCGTTCTACGATGTCTCTCTACGCATGAACTG ACCTTGCGTGCTCTCCTCCCTTCGGTACTACCAAACCTCAGCCTCGTCGA TAGTGATGGGCAGTCCATCAGCGATACGGACGGTATCTGGGACCCCAACA GTACTATGGAAACCCCGGGCGCCTCGATAGCCGCGGTTACGTTCAAGGGC GAAGACGGGTCCGAAGAGATGCACGTGTTCTTTGCCATGGCCTGGTTCCA CATGGAGTCGTGGGCGTGGGCGCACTATATCATGGAGTGGGCGACCCAGG GGGTATTCCAGGTGCGTGGAGAATGTTTTTTGTGTTTCTTGCTGGTGGCA TATGTACAGTAGTTTCAACAAAACTGTTGACGTGCACTGCCGTTGTGTGT GAGAGGTTTGGAGGAAGCATTGGATCTGCGGGTTTGATGGTCACATCTGT CCTTGATTCTCTTCGTGATGCGTGGAGGACATGGTAGCGTCGAACGAGGT CTGCCTTCGTTCCTGACGTTTTTCTTTCATCTGTCTAACCATTAATGTTG CTGTTCCCTCTTTCCTAGGGAGAGCGCCGCTTCTGGCTCGGCGCGATGGT TGACGACCACTTCCTCGGAACGAATCCTTTCGTGTACGACGGCGAGTCGA ATGCGAGCGATGAAGTGAGGAACCCCCGTCATCTTGTTGTTACTGGTCTT CGCTGTGCCGCAATGAATTGTTTAAAGTGCTGGTCACCATCTCCGATCTA ATAAAATGCGTTCCAACAACGTGTGACTTCGGGTTGGGGTTTCACTCACC ACTCTGGTAGACTCGAATCGGATGCTTGTGTGTATGTGAGTGGCACAAGG AGGACAATTAAGCGGTGATGAAGCAGCCCAAGCCTGACAAGAGTTCGAAC GCTGAGGGCAATGACACCTCTATCGTGTACAACCGTGTCTTTCTCGCCGC AAGTCATCTACTCCGAAGCAGGCCGAGTTTCAGCCATGAGAATGTCTACT TCGTCGTGTTTTGCATGAACCCTCGTGGGAAGCACGACAACATACCCGTG TGCAAGATGGTTGCTGGGGTTAAATCTCGTGCTCGAAGTGAGCACCACAC GCCTCATGACACTTTCCTATTTCATTGCCTATGCGAGAAGGCTTTTCATA ACTACGACATAGCGGAGGATGAAAGCAAGATGTGAGGCTCGGCATAAGGA GCGTGTCACTTCACCCTTTGTTGCGAAATCGGGCGAACGCTCGCAGGAGG AGCGGATCACGGGCGAGGAGCTCGAGGATTTCCTCAGTGCTACGGAAGCG CTGAACAAACTCTACAACGCCGAGATCGTCACTGAGTTCCCCTTCAACGC CCTCGGCATCCTCGAAAAGGTGACATCTTCATCTCAAGGGATCACACTGG AACGGGAACTGCTGCAGAATATTCACATTCTTTTTCGTTCGTCTCAATAA GAATCAGGCAAAACGAATGAGTGAATGATTTGACAGCCAGTATGCTGTAA TTTACATTCCTTCTCCGGAAGCGGCAGGCATTACGTTGGCAGCGCCTTGT TTCAACACGGAATCATGTTCTGTCTTGTTCCGGACTCCAGCAAGTGAACC TTCACAGATGGCTCGAATCATTGCCTCGTACTTGCAACTTTCGCCCCGCC GCCAAAGGCGGAAACGGAGTATACGTTCACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14387:3..3733-

>mRNA_Ecto-sp13_S_contig14387.3379.1 ID=mRNA_Ecto-sp13_S_contig14387.3379.1|Name=mRNA_Ecto-sp13_S_contig14387.3379.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14387:3..3733- (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGACGTATCGACGGTCTCGGAAGCGTACCTTTTGAGCGAGCTCTT
CAAGGGATTCTGGGCCGCATCTCAGCACGTCATTATTGACACGGGAGACG
GCGACTTCGATCTTCTCAACGACGGCGATGAGAACCACGGCAAGTGCAGC
ACGATCTTTGTCGGGTCCCAGCCTTCGGTCGGGGAGGACGGTGCGACCGG
GCAATATGAACAACTGTTGGCGTACTCGGCGAAGTTTCAGGTCCGTTTGG
TGTTCTTTGACAACGCCGAGACGGCCAATTTGGCCACCATCACAACCAAG
ATCGGGATCCAGCAACACTTCTCGGACGCTTTGCTCGCAGCGGCAAGCAT
CAGGCTGACAGATTCGGATGCACGAGTGGTGAACCCAGCGCTTCAAACAG
ACCCATCATATATTTATTTCCGTCCCGTGAGGGTATCGGGGGACCCTACA
GGCGGCGAGCGAAACATCGTCGCAGACCTCGTCGATAGTGATGGGCAGTC
CATCAGCGATACGGACGGTATCTGGGACCCCAACAGTACTATGGAAACCC
CGGGCGCCTCGATAGCCGCGGTTACGTTCAAGGGCGAAGACGGGTCCGAA
GAGATGCACGTGTTCTTTGCCATGGCCTGGTTCCACATGGAGTCGTGGGC
GTGGGCGCACTATATCATGGAGTGGGCGACCCAGGGGGTATTCCAGGGAG
AGCGCCGCTTCTGGCTCGGCGCGATGGTTGACGACCACTTCCTCGGAACG
AATCCTTTCGTGTACGACGGCGAGTCGAATGCGAGCGATGAAGAGGAGCG
GATCACGGGCGAGGAGCTCGAGGATTTCCTCAGTGCTACGGAAGCGCTGA
ACAAACTCTACAACGCCGAGATCGTCACTGAGTTCCCCTTCAACGCCCTC
GGCATCCTCGAAAAGGCGGAAACGGAGTATACGTTCACC
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