prot_Ecto-sp13_S_contig14384.3378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14384.3378.1
Unique Name	prot_Ecto-sp13_S_contig14384.3378.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	210

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Match: A0A6H5JG41_9PHAE (PI3K/PI4K catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG41_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 5.030e-137
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0

Query:    8 MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 210
            MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIG SLKKLPIKRRLSALDNELGRVNRMLLRRMQTR
Sbjct:    1 MIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEARYLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGDSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 203

[Close]

BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Match: A0A835ZF92_9STRA (PIK helical domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF92_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.340e-22
Identity = 71/221 (32.13%), Postives = 107/221 (48.42%), Query Frame = 0

Query:   14 NAVAAWIYLWMTFQLGFYESTD---LLPRGPRLPPKHEARYLTA-FEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSANLQQRCFGNIGLAVQMMWQFEAV-----GRRP---------------QEDGPSWNAFKNSYVLAALNGDNLPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVNRMLLRRMQTR 210
             A+  W+ LW++FQ    E      +   G    P  + +Y T    ELM +  D DVEF++PQLAAVL+ +  P+R   +T  V  RL + L++R   N  + + ++WQ  A      G  P               Q     W +       AA+ G NLP Q+ M+R+A+  D+M FVD L+ +   L    ++ RL+ L   LG +NR LLRR+ +R
Sbjct:    6 QAIHVWLTLWLSFQFTMDEIASGGGIKSPGYAPLPYADVQYWTQQMNELMEQVGDEDVEFYLPQLAAVLLRRDAPTRCNQVTTAVAVRLGSILRERAATNHMVGMHLLWQLRAATQGGAGLAPAGGRSXXXXXXXXXEQRGAEGWLSVVEP---AAVGGGNLPRQVAMRRQAFFCDNMRFVDRLVGLSRLLGATDVRIRLAELHRHLGELNRCLLRRIDSR 223

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14384.3378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JG41_9PHAE	5.030e-137	99.51	PI3K/PI4K catalytic domain-containing protein n=2 ...	[more]
A0A835ZF92_9STRA	3.340e-22	32.13	PIK helical domain-containing protein n=1 Tax=Trib...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..210
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14384	contig	Ecto-sp13_S_contig14384:20..2848 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14384.3378.1	mRNA_Ecto-sp13_S_contig14384.3378.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14384 20..2877 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14384.3378.1 ID=prot_Ecto-sp13_S_contig14384.3378.1|Name=mRNA_Ecto-sp13_S_contig14384.3378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MPGVAWRMIIQAGNAVAAWIYLWMTFQLGFYESTDLLPRGPRLPPKHEAR
YLTAFEELMLRWKDSDVEFFVPQLAAVLMSKGVPSRNVHITQLVVGRLSA
NLQQRCFGNIGLAVQMMWQFEAVGRRPQEDGPSWNAFKNSYVLAALNGDN
LPEQLRMQRRAYCADSMAFVDTLMDIGHSLKKLPIKRRLSALDNELGRVN
RMLLRRMQTR